RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 GDI2P50395 445 aaKnown RBP13.8□□□□□ -0.2
NUP50-201ENST00000347635 ETV1P50549 477 aa13.8□□□□□ -0.2
NUP50-201ENST00000347635 C1orf61Q13536 156 aa13.8□□□□□ -0.2
NUP50-201ENST00000347635 SYT14P1Q58G82 188 aa13.8□□□□□ -0.2
NUP50-201ENST00000347635 HENMT1Q5T8I9 393 aaKnown RBP13.8□□□□□ -0.2
NUP50-201ENST00000347635 LYSMD4Q5XG99 296 aa13.8□□□□□ -0.2
NUP50-201ENST00000347635 SAXO2Q658L1 398 aa13.8□□□□□ -0.2
NUP50-201ENST00000347635 TMEM17Q86X19 198 aa13.8□□□□□ -0.2
NUP50-201ENST00000347635 GALNT6Q8NCL4 622 aa13.8□□□□□ -0.2
NUP50-201ENST00000347635 NEDD4LQ96PU5 975 aa13.8□□□□□ -0.2
NUP50-201ENST00000347635 NUP50Q9UKX7 468 aa13.8□□□□□ -0.2
NUP50-201ENST00000347635 GKN3PP0CG01 181 aa13.79□□□□□ -0.2
NUP50-201ENST00000347635 RNH1P13489 461 aaKnown RBP13.79□□□□□ -0.2
NUP50-201ENST00000347635 MMP11P24347 488 aa13.79□□□□□ -0.2
NUP50-201ENST00000347635 NFATC4Q14934 902 aa13.79□□□□□ -0.2
NUP50-201ENST00000347635 RAB12Q6IQ22 244 aa13.79□□□□□ -0.2
NUP50-201ENST00000347635 WDR53Q7Z5U6 358 aaPredicted RBP13.79□□□□□ -0.2
NUP50-201ENST00000347635 TM9SF4Q92544 642 aa13.79□□□□□ -0.2
NUP50-201ENST00000347635 RELTQ969Z4 430 aa13.79□□□□□ -0.2
NUP50-201ENST00000347635 QRSL1Q9H0R6 528 aaKnown RBP13.79□□□□□ -0.2
NUP50-201ENST00000347635 SERINC1Q9NRX5 453 aa13.79□□□□□ -0.2
NUP50-201ENST00000347635 METTL21EPA6NDL7 271 aa13.79□□□□□ -0.2
NUP50-201ENST00000347635 CPEP16870 476 aa13.79□□□□□ -0.2
NUP50-201ENST00000347635 MTNR1BP49286 362 aa13.79□□□□□ -0.2
NUP50-201ENST00000347635 C12orf40Q86WS4 652 aa13.79□□□□□ -0.2
NUP50-201ENST00000347635 RBM45Q8IUH3 476 aaKnown RBP13.79□□□□□ -0.2
NUP50-201ENST00000347635 ZMYND19Q96E35 227 aaPredicted RBP13.79□□□□□ -0.2
NUP50-201ENST00000347635 SERINC2Q96SA4 455 aa13.79□□□□□ -0.2
NUP50-201ENST00000347635 DUSP23Q9BVJ7 150 aa13.79□□□□□ -0.2
NUP50-201ENST00000347635 EPHX3Q9H6B9 360 aa13.79□□□□□ -0.2
NUP50-201ENST00000347635 RFXAPO00287 272 aa13.79□□□□□ -0.2
NUP50-201ENST00000347635 ZNF432O94892 652 aa13.79□□□□□ -0.2
NUP50-201ENST00000347635 IGFBP1P08833 259 aaPredicted RBP13.79□□□□□ -0.2
NUP50-201ENST00000347635 VSX2P58304 361 aaPredicted RBP13.79□□□□□ -0.2
NUP50-201ENST00000347635 KIAA0040Q15053 153 aa13.79□□□□□ -0.2
NUP50-201ENST00000347635 TMEM52BQ4KMG9 183 aa13.79□□□□□ -0.2
NUP50-201ENST00000347635 PRTFDC1Q9NRG1 225 aa13.79□□□□□ -0.2
NUP50-201ENST00000347635 CLEC4EQ9ULY5 219 aa13.79□□□□□ -0.2
NUP50-201ENST00000347635 SLC5A10A0PJK1 596 aa13.79□□□□□ -0.2
NUP50-201ENST00000347635 TLX3O43711 291 aaPredicted RBP13.79□□□□□ -0.2
NUP50-201ENST00000347635 ZNF888P0CJ79 500 aaPredicted RBP13.79□□□□□ -0.2
NUP50-201ENST00000347635 CHRNEQ04844 493 aa13.79□□□□□ -0.2
NUP50-201ENST00000347635 GRM7Q14831 915 aa13.79□□□□□ -0.2
NUP50-201ENST00000347635 IRF4Q15306 451 aa13.79□□□□□ -0.2
NUP50-201ENST00000347635 COL28A1Q2UY09 1125 aa13.79□□□□□ -0.2
NUP50-201ENST00000347635 NXNL2Q5VZ03 156 aa13.79□□□□□ -0.2
NUP50-201ENST00000347635 GALNTL5Q7Z4T8 443 aa13.79□□□□□ -0.2
NUP50-201ENST00000347635 CSNK1A1LQ8N752 337 aa13.79□□□□□ -0.2
NUP50-201ENST00000347635 BPIFA2Q96DR5 249 aa13.79□□□□□ -0.2
NUP50-201ENST00000347635 PDXPQ96GD0 296 aa13.79□□□□□ -0.2
NUP50-201ENST00000347635 FYTTD1Q96QD9 318 aaKnown RBP13.79□□□□□ -0.2
NUP50-201ENST00000347635 RBCK1Q9BYM8 510 aa13.79□□□□□ -0.2
NUP50-201ENST00000347635 NANSQ9NR45 359 aa13.79□□□□□ -0.2
NUP50-201ENST00000347635 POLHQ9Y253 713 aa13.79□□□□□ -0.2
NUP50-201ENST00000347635 TMEM129A0AVI4 362 aa13.78□□□□□ -0.2
NUP50-201ENST00000347635 PTBP1P26599 531 aaKnown RBP eCLIP13.78□□□□□ -0.2
NUP50-201ENST00000347635 HLA-DMAP28067 261 aa13.78□□□□□ -0.2
NUP50-201ENST00000347635 CD300CQ08708 224 aa13.78□□□□□ -0.2
NUP50-201ENST00000347635 LYPD4Q6UWN0 246 aa13.78□□□□□ -0.2
NUP50-201ENST00000347635 CCDC190Q86UF4 302 aa13.78□□□□□ -0.2
NUP50-201ENST00000347635 GALNT9Q9HCQ5 603 aa13.78□□□□□ -0.2
NUP50-201ENST00000347635 PTTG3PQ9NZH4 202 aa13.78□□□□□ -0.2
NUP50-201ENST00000347635 LOC100509620A0A075B734 347 aa13.78□□□□□ -0.2
NUP50-201ENST00000347635 B4GALT3O60512 393 aa13.78□□□□□ -0.2
NUP50-201ENST00000347635 DPM1O60762 260 aa13.78□□□□□ -0.2
NUP50-201ENST00000347635 ALX3O95076 343 aa13.78□□□□□ -0.2
NUP50-201ENST00000347635 ETHE1O95571 254 aa13.78□□□□□ -0.2
NUP50-201ENST00000347635 GLT8D1Q68CQ7 371 aa13.78□□□□□ -0.2
NUP50-201ENST00000347635 CREB3L2Q70SY1 520 aa13.78□□□□□ -0.2
NUP50-201ENST00000347635 OR51L1Q8NGJ5 315 aa13.78□□□□□ -0.2
NUP50-201ENST00000347635 OR6T1Q8NGN1 323 aa13.78□□□□□ -0.2
NUP50-201ENST00000347635 ATG5Q9H1Y0 275 aa13.78□□□□□ -0.2
NUP50-201ENST00000347635 FZD7O75084 574 aa13.78□□□□□ -0.2
NUP50-201ENST00000347635 KCNK2O95069 426 aa13.78□□□□□ -0.2
NUP50-201ENST00000347635 MAS1P04201 325 aa13.78□□□□□ -0.2
NUP50-201ENST00000347635 VAMP1P23763 118 aa13.78□□□□□ -0.2
NUP50-201ENST00000347635 MMP12P39900 470 aa13.78□□□□□ -0.2
NUP50-201ENST00000347635 FNTBP49356 437 aa13.78□□□□□ -0.2
NUP50-201ENST00000347635 CSRP3P50461 194 aa13.78□□□□□ -0.2
NUP50-201ENST00000347635 REEP5Q00765 189 aa13.78□□□□□ -0.2
NUP50-201ENST00000347635 FIGLAQ6QHK4 219 aa13.78□□□□□ -0.2
NUP50-201ENST00000347635 PAQR6Q6TCH4 344 aa13.78□□□□□ -0.2
NUP50-201ENST00000347635 WASH2PQ6VEQ5 465 aa13.78□□□□□ -0.2
NUP50-201ENST00000347635 CDRT4Q8N9R6 151 aa13.78□□□□□ -0.2
NUP50-201ENST00000347635 LSM14AQ8ND56 463 aaKnown RBP13.78□□□□□ -0.2
NUP50-201ENST00000347635 SLC7A13Q8TCU3 470 aa13.78□□□□□ -0.2
NUP50-201ENST00000347635 ELMOD3Q96FG2 381 aa13.78□□□□□ -0.2
NUP50-201ENST00000347635 PBX4Q9BYU1 374 aa13.78□□□□□ -0.2
NUP50-201ENST00000347635 UBE2ZQ9H832 354 aaPredicted RBP13.78□□□□□ -0.2
NUP50-201ENST00000347635 COQ3Q9NZJ6 369 aa13.78□□□□□ -0.2
NUP50-201ENST00000347635 ABRACLQ9P1F3 81 aa13.78□□□□□ -0.2
NUP50-201ENST00000347635 A8MUA0 341 aa13.78□□□□□ -0.2
NUP50-201ENST00000347635 NDUFB2O95178 105 aa13.78□□□□□ -0.2
NUP50-201ENST00000347635 ZNF20P17024 532 aa13.78□□□□□ -0.2
NUP50-201ENST00000347635 P2RY2P41231 377 aa13.78□□□□□ -0.2
NUP50-201ENST00000347635 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.78□□□□□ -0.2
NUP50-201ENST00000347635 SLC25A24Q6NUK1 477 aa13.78□□□□□ -0.2
NUP50-201ENST00000347635 FAM26EQ8N5C1 309 aa13.78□□□□□ -0.2
NUP50-201ENST00000347635 HHIPQ96QV1 700 aa13.78□□□□□ -0.2
NUP50-201ENST00000347635 IL21RQ9HBE5 538 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms