RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 DUXAA6NLW8 204 aa12.95□□□□□ -0.34
HMGN3-202ENST00000344726 A8MXE2 369 aa12.95□□□□□ -0.34
HMGN3-202ENST00000344726 SLCO1B7G3V0H7 640 aa12.95□□□□□ -0.34
HMGN3-202ENST00000344726 EIF1AYO14602 144 aaKnown RBP12.95□□□□□ -0.34
HMGN3-202ENST00000344726 KLF11O14901 512 aa12.95□□□□□ -0.34
HMGN3-202ENST00000344726 AQP8O94778 261 aa12.95□□□□□ -0.34
HMGN3-202ENST00000344726 PGRP06401 933 aa12.95□□□□□ -0.34
HMGN3-202ENST00000344726 SHC1P29353 583 aa12.95□□□□□ -0.34
HMGN3-202ENST00000344726 SLC6A8P48029 635 aa12.95□□□□□ -0.34
HMGN3-202ENST00000344726 P2RX1P51575 399 aa12.95□□□□□ -0.34
HMGN3-202ENST00000344726 SORDQ00796 357 aa12.95□□□□□ -0.34
HMGN3-202ENST00000344726 FOXF1Q12946 379 aa12.95□□□□□ -0.34
HMGN3-202ENST00000344726 DAZAP2Q15038 168 aaPredicted RBP12.95□□□□□ -0.34
HMGN3-202ENST00000344726 GUSBP1Q15486 140 aa12.95□□□□□ -0.34
HMGN3-202ENST00000344726 GPR68Q15743 365 aa12.95□□□□□ -0.34
HMGN3-202ENST00000344726 MAPK14Q16539 360 aa12.95□□□□□ -0.34
HMGN3-202ENST00000344726 NXNQ6DKJ4 435 aa12.95□□□□□ -0.34
HMGN3-202ENST00000344726 BTLAQ7Z6A9 289 aa12.95□□□□□ -0.34
HMGN3-202ENST00000344726 CDC20BQ86Y33 519 aa12.95□□□□□ -0.34
HMGN3-202ENST00000344726 VPS37AQ8NEZ2 397 aa12.95□□□□□ -0.34
HMGN3-202ENST00000344726 PIWIL2Q8TC59 973 aaKnown RBP12.95□□□□□ -0.34
HMGN3-202ENST00000344726 GPR119Q8TDV5 335 aa12.95□□□□□ -0.34
HMGN3-202ENST00000344726 ARSGQ96EG1 525 aa12.95□□□□□ -0.34
HMGN3-202ENST00000344726 NEURL3Q96EH8 262 aa12.95□□□□□ -0.34
HMGN3-202ENST00000344726 LRRC46Q96FV0 321 aa12.95□□□□□ -0.34
HMGN3-202ENST00000344726 SLC35A5Q9BS91 424 aa12.95□□□□□ -0.34
HMGN3-202ENST00000344726 NMUR2Q9GZQ4 415 aa12.95□□□□□ -0.34
HMGN3-202ENST00000344726 ZNF350Q9GZX5 532 aa12.95□□□□□ -0.34
HMGN3-202ENST00000344726 PIGMQ9H3S5 423 aa12.95□□□□□ -0.34
HMGN3-202ENST00000344726 TMEM185BQ9H7F4 350 aa12.95□□□□□ -0.34
HMGN3-202ENST00000344726 PACSIN3Q9UKS6 424 aa12.95□□□□□ -0.34
HMGN3-202ENST00000344726 MKLN1Q9UL63 735 aa12.95□□□□□ -0.34
HMGN3-202ENST00000344726 ITPR3Q14573 2671 aa12.94□□□□□ -0.34
HMGN3-202ENST00000344726 A0A1W2PPR1 153 aa12.94□□□□□ -0.34
HMGN3-202ENST00000344726 STX11O75558 287 aa12.94□□□□□ -0.34
HMGN3-202ENST00000344726 UGT2B17O75795 530 aa12.94□□□□□ -0.34
HMGN3-202ENST00000344726 AK1P00568 194 aa12.94□□□□□ -0.34
HMGN3-202ENST00000344726 CGAP01215 116 aa12.94□□□□□ -0.34
HMGN3-202ENST00000344726 CRHP06850 196 aa12.94□□□□□ -0.34
HMGN3-202ENST00000344726 EPXP11678 715 aa12.94□□□□□ -0.34
HMGN3-202ENST00000344726 PEX19P40855 299 aa12.94□□□□□ -0.34
HMGN3-202ENST00000344726 EIF1AXP47813 144 aaKnown RBP12.94□□□□□ -0.34
HMGN3-202ENST00000344726 ART1P52961 327 aa12.94□□□□□ -0.34
HMGN3-202ENST00000344726 RPS3AP61247 264 aaKnown RBP12.94□□□□□ -0.34
HMGN3-202ENST00000344726 RAC1P63000 192 aa12.94□□□□□ -0.34
HMGN3-202ENST00000344726 SIRPAP78324 504 aa12.94□□□□□ -0.34
HMGN3-202ENST00000344726 ZNF141Q15928 474 aa12.94□□□□□ -0.34
HMGN3-202ENST00000344726 OR2A2Q6IF42 318 aa12.94□□□□□ -0.34
HMGN3-202ENST00000344726 TYW3Q6IPR3 259 aaKnown RBP12.94□□□□□ -0.34
HMGN3-202ENST00000344726 CNEP1R1Q8N9A8 125 aa12.94□□□□□ -0.34
HMGN3-202ENST00000344726 OR10D3Q8NH80 312 aa12.94□□□□□ -0.34
HMGN3-202ENST00000344726 FBXO27Q8NI29 283 aa12.94□□□□□ -0.34
HMGN3-202ENST00000344726 XAGE5Q8WWM1 108 aa12.94□□□□□ -0.34
HMGN3-202ENST00000344726 ATP6V1G3Q96LB4 118 aa12.94□□□□□ -0.34
HMGN3-202ENST00000344726 OR52E6Q96RD3 313 aa12.94□□□□□ -0.34
HMGN3-202ENST00000344726 SLC6A13Q9NSD5 602 aa12.94□□□□□ -0.34
HMGN3-202ENST00000344726 CCM2LQ9NUG4 571 aaPredicted RBP12.94□□□□□ -0.34
HMGN3-202ENST00000344726 SERINC4A6NH21 518 aa12.93□□□□□ -0.34
HMGN3-202ENST00000344726 CCDC154A6NI56 674 aa12.93□□□□□ -0.34
HMGN3-202ENST00000344726 H3BNH8 94 aa12.93□□□□□ -0.34
HMGN3-202ENST00000344726 GTPBP1O00178 669 aaKnown RBP12.93□□□□□ -0.34
HMGN3-202ENST00000344726 HMGN4O00479 90 aa12.93□□□□□ -0.34
HMGN3-202ENST00000344726 TNFSF11O14788 317 aa12.93□□□□□ -0.34
HMGN3-202ENST00000344726 ADAMDEC1O15204 470 aa12.93□□□□□ -0.34
HMGN3-202ENST00000344726 ZNF264O43296 627 aa12.93□□□□□ -0.34
HMGN3-202ENST00000344726 CXCL13O43927 109 aa12.93□□□□□ -0.34
HMGN3-202ENST00000344726 KIAA0513O60268 411 aa12.93□□□□□ -0.34
HMGN3-202ENST00000344726 BCAS1O75363 584 aaPredicted RBP12.93□□□□□ -0.34
HMGN3-202ENST00000344726 SMNDC1O75940 238 aaKnown RBP eCLIP12.93□□□□□ -0.34
HMGN3-202ENST00000344726 NTN1O95631 604 aa12.93□□□□□ -0.34
HMGN3-202ENST00000344726 NUDT14O95848 222 aa12.93□□□□□ -0.34
HMGN3-202ENST00000344726 GSNP06396 782 aa12.93□□□□□ -0.34
HMGN3-202ENST00000344726 UBL4AP11441 157 aa12.93□□□□□ -0.34
HMGN3-202ENST00000344726 PRKCAP17252 672 aa12.93□□□□□ -0.34
HMGN3-202ENST00000344726 CHI3L1P36222 383 aaPredicted RBP12.93□□□□□ -0.34
HMGN3-202ENST00000344726 CPA2P48052 419 aa12.93□□□□□ -0.34
HMGN3-202ENST00000344726 SUMO3P55854 103 aaPredicted RBP12.93□□□□□ -0.34
HMGN3-202ENST00000344726 SKP2Q13309 424 aa12.93□□□□□ -0.34
HMGN3-202ENST00000344726 SGCBQ16585 318 aa12.93□□□□□ -0.34
HMGN3-202ENST00000344726 PDCD4Q53EL6 469 aaKnown RBP12.93□□□□□ -0.34
HMGN3-202ENST00000344726 AP1ARQ63HQ0 302 aa12.93□□□□□ -0.34
HMGN3-202ENST00000344726 ZNF474Q6S9Z5 364 aaPredicted RBP12.93□□□□□ -0.34
HMGN3-202ENST00000344726 FRRS1Q6ZNA5 592 aa12.93□□□□□ -0.34
HMGN3-202ENST00000344726 C16orf62Q7Z3J2 963 aa12.93□□□□□ -0.34
HMGN3-202ENST00000344726 HMGN2P46Q86SG4 172 aa12.93□□□□□ -0.34
HMGN3-202ENST00000344726 RNF130Q86XS8 419 aa12.93□□□□□ -0.34
HMGN3-202ENST00000344726 KIF18BQ86Y91 864 aa12.93□□□□□ -0.34
HMGN3-202ENST00000344726 LILRA2Q8N149 483 aa12.93□□□□□ -0.34
HMGN3-202ENST00000344726 OR9I1Q8NGQ6 314 aa12.93□□□□□ -0.34
HMGN3-202ENST00000344726 RFWD2Q8NHY2 731 aa12.93□□□□□ -0.34
HMGN3-202ENST00000344726 ROPN1LQ96C74 230 aa12.93□□□□□ -0.34
HMGN3-202ENST00000344726 ZG16BQ96DA0 208 aa12.93□□□□□ -0.34
HMGN3-202ENST00000344726 PANX1Q96RD7 426 aa12.93□□□□□ -0.34
HMGN3-202ENST00000344726 SAP130Q9H0E3 1048 aa12.93□□□□□ -0.34
HMGN3-202ENST00000344726 OPN3Q9H1Y3 402 aaPredicted RBP12.93□□□□□ -0.34
HMGN3-202ENST00000344726 SLCO1B3Q9NPD5 702 aa12.93□□□□□ -0.34
HMGN3-202ENST00000344726 EXD2Q9NVH0 621 aa12.93□□□□□ -0.34
HMGN3-202ENST00000344726 ST6GALNAC2Q9UJ37 374 aa12.93□□□□□ -0.34
HMGN3-202ENST00000344726 USH1CQ9Y6N9 552 aa12.93□□□□□ -0.34
HMGN3-202ENST00000344726 PRRC2AP48634 2157 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms