RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 ZNF679Q8IYX0 411 aa16.98■□□□□ 0.31
SMC4-201ENST00000344722 OR6N1Q8NGY5 312 aa16.98■□□□□ 0.31
SMC4-201ENST00000344722 ZIC5Q96T25 663 aa16.98■□□□□ 0.31
SMC4-201ENST00000344722 TMEM43Q9BTV4 400 aa16.98■□□□□ 0.31
SMC4-201ENST00000344722 RNF167Q9H6Y7 350 aa16.98■□□□□ 0.31
SMC4-201ENST00000344722 LUZP4Q9P127 313 aa16.98■□□□□ 0.31
SMC4-201ENST00000344722 UBE2J1Q9Y385 318 aaPredicted RBP16.98■□□□□ 0.31
SMC4-201ENST00000344722 TMEM82A0PJX8 343 aa16.98■□□□□ 0.31
SMC4-201ENST00000344722 SLC9B1P1A6NJY1 282 aa16.98■□□□□ 0.31
SMC4-201ENST00000344722 TMX2-CTNND1H3BSU7 103 aa16.98■□□□□ 0.31
SMC4-201ENST00000344722 PTGESO14684 152 aa16.98■□□□□ 0.31
SMC4-201ENST00000344722 PIP5K1CO60331 668 aa16.98■□□□□ 0.31
SMC4-201ENST00000344722 ADRB1P08588 477 aa16.98■□□□□ 0.31
SMC4-201ENST00000344722 NAT1P18440 290 aa16.98■□□□□ 0.31
SMC4-201ENST00000344722 CTXN1P60606 82 aa16.98■□□□□ 0.31
SMC4-201ENST00000344722 UBE2FQ969M7 185 aa16.98■□□□□ 0.31
SMC4-201ENST00000344722 NEIL2Q969S2 332 aa16.98■□□□□ 0.31
SMC4-201ENST00000344722 ZNF705FA8MVS1 300 aaPredicted RBP16.98■□□□□ 0.31
SMC4-201ENST00000344722 DIRAS3O95661 229 aa16.98■□□□□ 0.31
SMC4-201ENST00000344722 ZNF705DP0CH99 300 aaPredicted RBP16.98■□□□□ 0.31
SMC4-201ENST00000344722 ZNF705BP0CI00 300 aaPredicted RBP16.98■□□□□ 0.31
SMC4-201ENST00000344722 TOR2AQ5JU69 321 aa16.98■□□□□ 0.31
SMC4-201ENST00000344722 SLC35F3Q8IY50 421 aa16.98■□□□□ 0.31
SMC4-201ENST00000344722 ZNF619Q8N2I2 560 aa16.98■□□□□ 0.31
SMC4-201ENST00000344722 OR4M1Q8NGD0 313 aa16.98■□□□□ 0.31
SMC4-201ENST00000344722 GABARAPL3Q9BY60 117 aa16.98■□□□□ 0.31
SMC4-201ENST00000344722 PIGMQ9H3S5 423 aa16.98■□□□□ 0.31
SMC4-201ENST00000344722 B3GAT2Q9NPZ5 323 aa16.98■□□□□ 0.31
SMC4-201ENST00000344722 SMCO4Q9NRQ5 59 aa16.98■□□□□ 0.31
SMC4-201ENST00000344722 USP3Q9Y6I4 520 aa16.98■□□□□ 0.31
SMC4-201ENST00000344722 NRXN3Q9Y4C0 1643 aa16.98■□□□□ 0.31
SMC4-201ENST00000344722 B3GALNT1O75752 331 aa16.97■□□□□ 0.31
SMC4-201ENST00000344722 GJA5P36382 358 aa16.97■□□□□ 0.31
SMC4-201ENST00000344722 CCR6P51684 374 aa16.97■□□□□ 0.31
SMC4-201ENST00000344722 SLC26A5P58743 744 aa16.97■□□□□ 0.31
SMC4-201ENST00000344722 ARHGAP40Q5TG30 622 aa16.97■□□□□ 0.31
SMC4-201ENST00000344722 SAXO2Q658L1 398 aa16.97■□□□□ 0.31
SMC4-201ENST00000344722 LCTLQ6UWM7 567 aa16.97■□□□□ 0.31
SMC4-201ENST00000344722 ADGRF3Q8IZF5 1079 aa16.97■□□□□ 0.31
SMC4-201ENST00000344722 HORMAD2Q8N7B1 307 aa16.97■□□□□ 0.31
SMC4-201ENST00000344722 FNDC9Q8TBE3 224 aa16.97■□□□□ 0.31
SMC4-201ENST00000344722 HOXB13Q92826 284 aaPredicted RBP16.97■□□□□ 0.31
SMC4-201ENST00000344722 JSRP1Q96MG2 331 aaPredicted RBP16.97■□□□□ 0.31
SMC4-201ENST00000344722 FRS3O43559 492 aa16.97■□□□□ 0.31
SMC4-201ENST00000344722 GPX2P18283 190 aa16.97■□□□□ 0.31
SMC4-201ENST00000344722 SHC1P29353 583 aa16.97■□□□□ 0.31
SMC4-201ENST00000344722 CTF1Q16619 201 aa16.97■□□□□ 0.31
SMC4-201ENST00000344722 EID2Q8N6I1 236 aa16.97■□□□□ 0.31
SMC4-201ENST00000344722 GATSQ8NAP1 163 aa16.97■□□□□ 0.31
SMC4-201ENST00000344722 SFXN2Q96NB2 322 aa16.97■□□□□ 0.31
SMC4-201ENST00000344722 WASF3Q9UPY6 502 aa16.97■□□□□ 0.31
SMC4-201ENST00000344722 SLC45A1Q9Y2W3 748 aa16.97■□□□□ 0.31
SMC4-201ENST00000344722 IER3IP1Q9Y5U9 82 aa16.97■□□□□ 0.31
SMC4-201ENST00000344722 TRABD2BA6NFA1 517 aa16.97■□□□□ 0.31
SMC4-201ENST00000344722 ZNF16P17020 682 aaPredicted RBP16.97■□□□□ 0.31
SMC4-201ENST00000344722 TACR1P25103 407 aa16.97■□□□□ 0.31
SMC4-201ENST00000344722 SEC13P55735 322 aa16.97■□□□□ 0.31
SMC4-201ENST00000344722 TAS2R20P59543 309 aa16.97■□□□□ 0.31
SMC4-201ENST00000344722 MFSD13AQ14CX5 517 aa16.97■□□□□ 0.31
SMC4-201ENST00000344722 SDR9C7Q8NEX9 313 aa16.97■□□□□ 0.31
SMC4-201ENST00000344722 BPIFA2Q96DR5 249 aa16.97■□□□□ 0.31
SMC4-201ENST00000344722 SLC19A3Q9BZV2 496 aa16.97■□□□□ 0.31
SMC4-201ENST00000344722 NRIP3Q9NQ35 241 aa16.97■□□□□ 0.31
SMC4-201ENST00000344722 TDP1Q9NUW8 608 aa16.97■□□□□ 0.31
SMC4-201ENST00000344722 CLEC2DQ9UHP7 191 aa16.97■□□□□ 0.31
SMC4-201ENST00000344722 PRSS21Q9Y6M0 314 aa16.97■□□□□ 0.31
SMC4-201ENST00000344722 HCRTR2O43614 444 aa16.97■□□□□ 0.31
SMC4-201ENST00000344722 ZNF623O75123 536 aa16.97■□□□□ 0.31
SMC4-201ENST00000344722 FBXO45P0C2W1 286 aa16.97■□□□□ 0.31
SMC4-201ENST00000344722 FOSL1P15407 271 aa16.97■□□□□ 0.31
SMC4-201ENST00000344722 DEFB134Q4QY38 66 aa16.97■□□□□ 0.31
SMC4-201ENST00000344722 OR52N1Q8NH53 320 aa16.97■□□□□ 0.31
SMC4-201ENST00000344722 CNTNAP3Q9BZ76 1288 aa16.97■□□□□ 0.31
SMC4-201ENST00000344722 SLAMF7Q9NQ25 335 aa16.97■□□□□ 0.31
SMC4-201ENST00000344722 PRTFDC1Q9NRG1 225 aa16.97■□□□□ 0.31
SMC4-201ENST00000344722 ZNF281Q9Y2X9 895 aa16.97■□□□□ 0.31
SMC4-201ENST00000344722 ACTL7AQ9Y615 435 aa16.97■□□□□ 0.31
SMC4-201ENST00000344722 ZNF860A6NHJ4 632 aa16.97■□□□□ 0.31
SMC4-201ENST00000344722 FAM183AA6NL82 134 aa16.97■□□□□ 0.31
SMC4-201ENST00000344722 GIPP09681 153 aaPredicted RBP16.97■□□□□ 0.31
SMC4-201ENST00000344722 ELNP15502 786 aa16.97■□□□□ 0.31
SMC4-201ENST00000344722 CR2P20023 1033 aa16.97■□□□□ 0.31
SMC4-201ENST00000344722 CLDN20P56880 219 aa16.97■□□□□ 0.31
SMC4-201ENST00000344722 C1QTNF12Q5T7M4 302 aa16.97■□□□□ 0.31
SMC4-201ENST00000344722 NXNL2Q5VZ03 156 aa16.97■□□□□ 0.31
SMC4-201ENST00000344722 ZNF704Q6ZNC4 412 aaPredicted RBP16.97■□□□□ 0.31
SMC4-201ENST00000344722 TMEM200AQ86VY9 491 aa16.97■□□□□ 0.31
SMC4-201ENST00000344722 CCDC71LQ8N9Z2 235 aa16.97■□□□□ 0.31
SMC4-201ENST00000344722 ZBTB44Q8NCP5 570 aa16.97■□□□□ 0.31
SMC4-201ENST00000344722 OR14A2Q96R54 314 aa16.97■□□□□ 0.31
SMC4-201ENST00000344722 DOK1Q99704 481 aa16.97■□□□□ 0.31
SMC4-201ENST00000344722 A0A1W2PS29 197 aa16.96■□□□□ 0.31
SMC4-201ENST00000344722 ZNF705GA8MUZ8 300 aaPredicted RBP16.96■□□□□ 0.31
SMC4-201ENST00000344722 GPX5O75715 221 aa16.96■□□□□ 0.31
SMC4-201ENST00000344722 KNG1P01042 644 aa16.96■□□□□ 0.31
SMC4-201ENST00000344722 CCR9P51686 369 aa16.96■□□□□ 0.31
SMC4-201ENST00000344722 HYAL2Q12891 473 aa16.96■□□□□ 0.31
SMC4-201ENST00000344722 ENTPD8Q5MY95 495 aa16.96■□□□□ 0.31
SMC4-201ENST00000344722 GPR155Q7Z3F1 870 aa16.96■□□□□ 0.31
SMC4-201ENST00000344722 GRAMD2AQ8IUY3 354 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms