RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 MLXQ9UH92 298 aa13.84□□□□□ -0.19
CLCN1-201ENST00000343257 EXOGQ9Y2C4 368 aaKnown RBP13.84□□□□□ -0.19
CLCN1-201ENST00000343257 CDHR4A6H8M9 788 aa13.83□□□□□ -0.19
CLCN1-201ENST00000343257 AIPO00170 330 aa13.83□□□□□ -0.19
CLCN1-201ENST00000343257 NFATC1O95644 943 aa13.83□□□□□ -0.19
CLCN1-201ENST00000343257 RLN2P04090 185 aa13.83□□□□□ -0.19
CLCN1-201ENST00000343257 HMGN2P05204 90 aaKnown RBP13.83□□□□□ -0.19
CLCN1-201ENST00000343257 FGF2P09038 288 aa13.83□□□□□ -0.19
CLCN1-201ENST00000343257 C4BPBP20851 252 aa13.83□□□□□ -0.19
CLCN1-201ENST00000343257 IFNGR2P38484 337 aa13.83□□□□□ -0.19
CLCN1-201ENST00000343257 PITPNAQ00169 270 aa13.83□□□□□ -0.19
CLCN1-201ENST00000343257 FUT5Q11128 374 aa13.83□□□□□ -0.19
CLCN1-201ENST00000343257 EIF2B5Q13144 721 aaKnown RBP13.83□□□□□ -0.19
CLCN1-201ENST00000343257 GNA13Q14344 377 aa13.83□□□□□ -0.19
CLCN1-201ENST00000343257 LDLRAD1Q5T700 205 aa13.83□□□□□ -0.19
CLCN1-201ENST00000343257 OR2T33Q8NG76 320 aa13.83□□□□□ -0.19
CLCN1-201ENST00000343257 SCARB1Q8WTV0 552 aa13.83□□□□□ -0.19
CLCN1-201ENST00000343257 OSTF1Q92882 214 aa13.83□□□□□ -0.19
CLCN1-201ENST00000343257 NDC1Q9BTX1 674 aa13.83□□□□□ -0.19
CLCN1-201ENST00000343257 PCDHGA5Q9Y5G8 931 aa13.83□□□□□ -0.19
CLCN1-201ENST00000343257 NPTNQ9Y639 398 aa13.83□□□□□ -0.19
CLCN1-201ENST00000343257 ANKRD61A6NGH8 418 aa13.83□□□□□ -0.2
CLCN1-201ENST00000343257 PSMD9O00233 223 aa13.83□□□□□ -0.2
CLCN1-201ENST00000343257 ZNF35P13682 527 aa13.83□□□□□ -0.2
CLCN1-201ENST00000343257 NOS3P29474 1203 aa13.83□□□□□ -0.2
CLCN1-201ENST00000343257 SEC61A1P61619 476 aaKnown RBP13.83□□□□□ -0.2
CLCN1-201ENST00000343257 METTL11BQ5VVY1 283 aa13.83□□□□□ -0.2
CLCN1-201ENST00000343257 CST9Q5W186 159 aa13.83□□□□□ -0.2
CLCN1-201ENST00000343257 C22orf39Q6P5X5 142 aa13.83□□□□□ -0.2
CLCN1-201ENST00000343257 SSX6Q7RTT6 188 aa13.83□□□□□ -0.2
CLCN1-201ENST00000343257 VOPP1Q96AW1 172 aa13.83□□□□□ -0.2
CLCN1-201ENST00000343257 BBS4Q96RK4 519 aa13.83□□□□□ -0.2
CLCN1-201ENST00000343257 UBQLN3Q9H347 655 aa13.83□□□□□ -0.2
CLCN1-201ENST00000343257 IFT22Q9H7X7 185 aa13.83□□□□□ -0.2
CLCN1-201ENST00000343257 FKRPQ9H9S5 495 aa13.83□□□□□ -0.2
CLCN1-201ENST00000343257 TAC3Q9UHF0 121 aa13.83□□□□□ -0.2
CLCN1-201ENST00000343257 LHX6Q9UPM6 363 aa13.83□□□□□ -0.2
CLCN1-201ENST00000343257 MYOFQ9NZM1 2061 aa13.83□□□□□ -0.2
CLCN1-201ENST00000343257 D6RAR5 112 aa13.83□□□□□ -0.2
CLCN1-201ENST00000343257 H7BY64 318 aa13.83□□□□□ -0.2
CLCN1-201ENST00000343257 LDOC1O95751 146 aaPredicted RBP13.83□□□□□ -0.2
CLCN1-201ENST00000343257 ACHEP22303 614 aa13.83□□□□□ -0.2
CLCN1-201ENST00000343257 MAPK8P45983 427 aa13.83□□□□□ -0.2
CLCN1-201ENST00000343257 GPR85P60893 370 aa13.83□□□□□ -0.2
CLCN1-201ENST00000343257 GSG1LQ6UXU4 331 aa13.83□□□□□ -0.2
CLCN1-201ENST00000343257 KCTD12Q96CX2 325 aaKnown RBP13.83□□□□□ -0.2
CLCN1-201ENST00000343257 PRAP1Q96NZ9 151 aa13.83□□□□□ -0.2
CLCN1-201ENST00000343257 LYSMD1Q96S90 227 aa13.83□□□□□ -0.2
CLCN1-201ENST00000343257 ACTR6Q9GZN1 396 aa13.83□□□□□ -0.2
CLCN1-201ENST00000343257 PRKAG2Q9UGJ0 569 aa13.83□□□□□ -0.2
CLCN1-201ENST00000343257 CA5BQ9Y2D0 317 aa13.83□□□□□ -0.2
CLCN1-201ENST00000343257 SLC5A10A0PJK1 596 aa13.82□□□□□ -0.2
CLCN1-201ENST00000343257 OR2W5A6NFC9 320 aa13.82□□□□□ -0.2
CLCN1-201ENST00000343257 PTP4A3O75365 173 aa13.82□□□□□ -0.2
CLCN1-201ENST00000343257 MT-ND5P03915 603 aa13.82□□□□□ -0.2
CLCN1-201ENST00000343257 RGS8P57771 180 aaPredicted RBP13.82□□□□□ -0.2
CLCN1-201ENST00000343257 MC2RQ01718 297 aa13.82□□□□□ -0.2
CLCN1-201ENST00000343257 GK2Q14410 553 aaPredicted RBP13.82□□□□□ -0.2
CLCN1-201ENST00000343257 AGERQ15109 404 aa13.82□□□□□ -0.2
CLCN1-201ENST00000343257 BEX5Q5H9J7 111 aa13.82□□□□□ -0.2
CLCN1-201ENST00000343257 C11orf88Q6PI97 169 aa13.82□□□□□ -0.2
CLCN1-201ENST00000343257 ZNF783Q6ZMS7 281 aa13.82□□□□□ -0.2
CLCN1-201ENST00000343257 RASGRP3Q8IV61 690 aa13.82□□□□□ -0.2
CLCN1-201ENST00000343257 C2CD4CQ8TF44 421 aa13.82□□□□□ -0.2
CLCN1-201ENST00000343257 OR14A2Q96R54 314 aa13.82□□□□□ -0.2
CLCN1-201ENST00000343257 OR2AG1Q9H205 316 aa13.82□□□□□ -0.2
CLCN1-201ENST00000343257 NEUROD4Q9HD90 331 aa13.82□□□□□ -0.2
CLCN1-201ENST00000343257 TAS2R3Q9NYW6 316 aa13.82□□□□□ -0.2
CLCN1-201ENST00000343257 ICKQ9UPZ9 632 aa13.82□□□□□ -0.2
CLCN1-201ENST00000343257 RNF215Q9Y6U7 377 aa13.82□□□□□ -0.2
CLCN1-201ENST00000343257 TMEM189-UBE2V1I3L0A0 370 aa13.82□□□□□ -0.2
CLCN1-201ENST00000343257 GOSR2O14653 212 aa13.82□□□□□ -0.2
CLCN1-201ENST00000343257 TBX6O95947 436 aaPredicted RBP13.82□□□□□ -0.2
CLCN1-201ENST00000343257 CLTBP09497 229 aa13.82□□□□□ -0.2
CLCN1-201ENST00000343257 EPXP11678 715 aa13.82□□□□□ -0.2
CLCN1-201ENST00000343257 PSMB10P40306 273 aa13.82□□□□□ -0.2
CLCN1-201ENST00000343257 LRRN1Q6UXK5 716 aa13.82□□□□□ -0.2
CLCN1-201ENST00000343257 FCRLAQ7L513 359 aa13.82□□□□□ -0.2
CLCN1-201ENST00000343257 MCHR1Q99705 422 aa13.82□□□□□ -0.2
CLCN1-201ENST00000343257 IFT27Q9BW83 186 aa13.82□□□□□ -0.2
CLCN1-201ENST00000343257 ZCCHC2Q9C0B9 1178 aaKnown RBP13.82□□□□□ -0.2
CLCN1-201ENST00000343257 TMEM138Q9NPI0 162 aa13.82□□□□□ -0.2
CLCN1-201ENST00000343257 GLS2Q9UI32 602 aa13.82□□□□□ -0.2
CLCN1-201ENST00000343257 ZMIZ1Q9ULJ6 1067 aa13.82□□□□□ -0.2
CLCN1-201ENST00000343257 FLRT2O43155 660 aa13.81□□□□□ -0.2
CLCN1-201ENST00000343257 CREBL2O60519 120 aaPredicted RBP13.81□□□□□ -0.2
CLCN1-201ENST00000343257 FCMRO60667 390 aa13.81□□□□□ -0.2
CLCN1-201ENST00000343257 HOXB3P14651 431 aaPredicted RBP13.81□□□□□ -0.2
CLCN1-201ENST00000343257 GABRA1P14867 456 aa13.81□□□□□ -0.2
CLCN1-201ENST00000343257 NDUFV2P19404 249 aa13.81□□□□□ -0.2
CLCN1-201ENST00000343257 PDSS1Q5T2R2 415 aa13.81□□□□□ -0.2
CLCN1-201ENST00000343257 ZFP82Q8N141 532 aa13.81□□□□□ -0.2
CLCN1-201ENST00000343257 OR9A1PQ8NGU1 263 aa13.81□□□□□ -0.2
CLCN1-201ENST00000343257 PDCD1LG2Q9BQ51 273 aa13.81□□□□□ -0.2
CLCN1-201ENST00000343257 PELOQ9BRX2 385 aaKnown RBP13.81□□□□□ -0.2
CLCN1-201ENST00000343257 NPDC1Q9NQX5 325 aaPredicted RBP13.81□□□□□ -0.2
CLCN1-201ENST00000343257 OR10H1Q9Y4A9 318 aa13.81□□□□□ -0.2
CLCN1-201ENST00000343257 PLXNB3Q9ULL4 1909 aa13.81□□□□□ -0.2
CLCN1-201ENST00000343257 MEIS3P1A6NDR6 274 aa13.81□□□□□ -0.2
CLCN1-201ENST00000343257 DUSP11O75319 330 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms