RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 UBBP0CG47 229 aa9□□□□□ -0.97
PTCHD4-201ENST00000339488 PAX6P26367 422 aa9□□□□□ -0.97
PTCHD4-201ENST00000339488 CCR1P32246 355 aa9□□□□□ -0.97
PTCHD4-201ENST00000339488 APLNRP35414 380 aa9□□□□□ -0.97
PTCHD4-201ENST00000339488 ADPRHP54922 357 aa9□□□□□ -0.97
PTCHD4-201ENST00000339488 RPS27AP62979 156 aaKnown RBP9□□□□□ -0.97
PTCHD4-201ENST00000339488 UBA52P62987 128 aaKnown RBP9□□□□□ -0.97
PTCHD4-201ENST00000339488 TAP2Q03519 686 aa9□□□□□ -0.97
PTCHD4-201ENST00000339488 KIAA0141Q14154 515 aaPredicted RBP9□□□□□ -0.97
PTCHD4-201ENST00000339488 INPP5JQ15735 1006 aaPredicted RBP9□□□□□ -0.97
PTCHD4-201ENST00000339488 ZNF239Q16600 458 aaKnown RBP9□□□□□ -0.97
PTCHD4-201ENST00000339488 TMEM31Q5JXX7 168 aa9□□□□□ -0.97
PTCHD4-201ENST00000339488 NPSR1Q6W5P4 371 aa9□□□□□ -0.97
PTCHD4-201ENST00000339488 LINGO2Q7L985 606 aa9□□□□□ -0.97
PTCHD4-201ENST00000339488 OR56A3Q8NH54 315 aa9□□□□□ -0.97
PTCHD4-201ENST00000339488 SELENOMQ8WWX9 145 aa9□□□□□ -0.97
PTCHD4-201ENST00000339488 NTAN1Q96AB6 310 aa9□□□□□ -0.97
PTCHD4-201ENST00000339488 FOXRED1Q96CU9 486 aaPredicted RBP9□□□□□ -0.97
PTCHD4-201ENST00000339488 ORAI1Q96D31 301 aa9□□□□□ -0.97
PTCHD4-201ENST00000339488 CAMK1GQ96NX5 476 aa9□□□□□ -0.97
PTCHD4-201ENST00000339488 CXCL16Q9H2A7 254 aa9□□□□□ -0.97
PTCHD4-201ENST00000339488 PTGES2Q9H7Z7 377 aa9□□□□□ -0.97
PTCHD4-201ENST00000339488 IPPKQ9H8X2 491 aa9□□□□□ -0.97
PTCHD4-201ENST00000339488 ASCL3Q9NQ33 180 aa9□□□□□ -0.97
PTCHD4-201ENST00000339488 SEMA3GQ9NS98 782 aa9□□□□□ -0.97
PTCHD4-201ENST00000339488 RBM22Q9NW64 420 aaKnown RBP eCLIP9□□□□□ -0.975e-7■■□□□ 12.6
PTCHD4-201ENST00000339488 GAR1Q9NY12 217 aaKnown RBP9□□□□□ -0.97
PTCHD4-201ENST00000339488 KLK11Q9UBX7 282 aa9□□□□□ -0.97
PTCHD4-201ENST00000339488 CCL27Q9Y4X3 112 aa9□□□□□ -0.97
PTCHD4-201ENST00000339488 TMEM272A0A1B0GTI8 110 aa9□□□□□ -0.97
PTCHD4-201ENST00000339488 A0A1B0GUH1 482 aa9□□□□□ -0.97
PTCHD4-201ENST00000339488 TRDV1A0A1B0GX56 115 aa9□□□□□ -0.97
PTCHD4-201ENST00000339488 IQCF5A8MTL0 148 aa9□□□□□ -0.97
PTCHD4-201ENST00000339488 C9JQL5 133 aa9□□□□□ -0.97
PTCHD4-201ENST00000339488 TMEM189-UBE2V1I3L0A0 370 aa9□□□□□ -0.97
PTCHD4-201ENST00000339488 OR2A4O95047 310 aa9□□□□□ -0.97
PTCHD4-201ENST00000339488 RLN1P04808 185 aa9□□□□□ -0.97
PTCHD4-201ENST00000339488 LAMP1P11279 417 aa9□□□□□ -0.97
PTCHD4-201ENST00000339488 RAB5AP20339 215 aa9□□□□□ -0.97
PTCHD4-201ENST00000339488 NME2P22392 152 aa9□□□□□ -0.97
PTCHD4-201ENST00000339488 IRS1P35568 1242 aa9□□□□□ -0.97
PTCHD4-201ENST00000339488 OPRD1P41143 372 aa9□□□□□ -0.97
PTCHD4-201ENST00000339488 CDKN1CP49918 316 aaPredicted RBP9□□□□□ -0.97
PTCHD4-201ENST00000339488 ART1P52961 327 aa9□□□□□ -0.97
PTCHD4-201ENST00000339488 EPHB3P54753 998 aa9□□□□□ -0.97
PTCHD4-201ENST00000339488 TBX4P57082 545 aa9□□□□□ -0.97
PTCHD4-201ENST00000339488 GLO1Q04760 184 aa9□□□□□ -0.97
PTCHD4-201ENST00000339488 TWF1Q12792 350 aa9□□□□□ -0.97
PTCHD4-201ENST00000339488 LRIF1Q5T3J3 769 aa9□□□□□ -0.97
PTCHD4-201ENST00000339488 ZNF529Q6P280 563 aa9□□□□□ -0.97
PTCHD4-201ENST00000339488 NPAS3Q8IXF0 933 aa9□□□□□ -0.97
PTCHD4-201ENST00000339488 THEM6Q8WUY1 208 aa9□□□□□ -0.97
PTCHD4-201ENST00000339488 EEF1AKMT1Q8WVE0 214 aa9□□□□□ -0.97
PTCHD4-201ENST00000339488 OR2A7Q96R45 310 aa9□□□□□ -0.97
PTCHD4-201ENST00000339488 ELF4Q99607 663 aaPredicted RBP9□□□□□ -0.97
PTCHD4-201ENST00000339488 DOHHQ9BU89 302 aa9□□□□□ -0.97
PTCHD4-201ENST00000339488 HRH4Q9H3N8 390 aa9□□□□□ -0.97
PTCHD4-201ENST00000339488 DUSP22Q9NRW4 184 aa9□□□□□ -0.97
PTCHD4-201ENST00000339488 ACER3Q9NUN7 267 aa9□□□□□ -0.97
PTCHD4-201ENST00000339488 TMEM161AQ9NX61 479 aa9□□□□□ -0.97
PTCHD4-201ENST00000339488 SLC27A6Q9Y2P4 619 aa9□□□□□ -0.97
PTCHD4-201ENST00000339488 ALPK3Q96L96 1907 aa9□□□□□ -0.97
PTCHD4-201ENST00000339488 ADAMTSL1Q8N6G6 1762 aa9□□□□□ -0.97
PTCHD4-201ENST00000339488 TRAV14DV4A0A0A6YYC5 116 aa8.99□□□□□ -0.97
PTCHD4-201ENST00000339488 CPED1A4D0V7 1026 aa8.99□□□□□ -0.97
PTCHD4-201ENST00000339488 HMSDA8MTL9 139 aa8.99□□□□□ -0.97
PTCHD4-201ENST00000339488 YY2O15391 372 aa8.99□□□□□ -0.97
PTCHD4-201ENST00000339488 SLC25A27O95847 323 aa8.99□□□□□ -0.97
PTCHD4-201ENST00000339488 SFTA3P0C7M3 94 aa8.99□□□□□ -0.97
PTCHD4-201ENST00000339488 STAG3L1P0CL83 205 aa8.99□□□□□ -0.97
PTCHD4-201ENST00000339488 HOXB9P17482 250 aaPredicted RBP8.99□□□□□ -0.97
PTCHD4-201ENST00000339488 AHRP35869 848 aa8.99□□□□□ -0.97
PTCHD4-201ENST00000339488 OMPP47874 163 aa8.99□□□□□ -0.97
PTCHD4-201ENST00000339488 RFX3P48380 749 aa8.99□□□□□ -0.97
PTCHD4-201ENST00000339488 CARD18P57730 90 aa8.99□□□□□ -0.97
PTCHD4-201ENST00000339488 RPS14P62263 151 aaKnown RBP8.99□□□□□ -0.97
PTCHD4-201ENST00000339488 TPBGQ13641 420 aa8.99□□□□□ -0.97
PTCHD4-201ENST00000339488 SYT14P1Q58G82 188 aa8.99□□□□□ -0.97
PTCHD4-201ENST00000339488 SLC35D3Q5M8T2 416 aa8.99□□□□□ -0.97
PTCHD4-201ENST00000339488 SAPCD1Q5SSQ6 148 aa8.99□□□□□ -0.97
PTCHD4-201ENST00000339488 AFMIDQ63HM1 303 aa8.99□□□□□ -0.97
PTCHD4-201ENST00000339488 ACSM5Q6NUN0 579 aa8.99□□□□□ -0.97
PTCHD4-201ENST00000339488 PLBD1Q6P4A8 553 aa8.99□□□□□ -0.97
PTCHD4-201ENST00000339488 DEGS2Q6QHC5 323 aa8.99□□□□□ -0.97
PTCHD4-201ENST00000339488 ZNF546Q86UE3 836 aa8.99□□□□□ -0.97
PTCHD4-201ENST00000339488 SP8Q8IXZ3 490 aa8.99□□□□□ -0.97
PTCHD4-201ENST00000339488 RHEBL1Q8TAI7 183 aa8.99□□□□□ -0.97
PTCHD4-201ENST00000339488 LINC01599Q8WXQ3 324 aa8.99□□□□□ -0.97
PTCHD4-201ENST00000339488 LCORQ96JN0 433 aaPredicted RBP8.99□□□□□ -0.97
PTCHD4-201ENST00000339488 ZNF382Q96SR6 550 aa8.99□□□□□ -0.97
PTCHD4-201ENST00000339488 MAPKAP1Q9BPZ7 522 aa8.99□□□□□ -0.97
PTCHD4-201ENST00000339488 ACBD6Q9BR61 282 aa8.99□□□□□ -0.97
PTCHD4-201ENST00000339488 COLEC11Q9BWP8 271 aa8.99□□□□□ -0.97
PTCHD4-201ENST00000339488 DERL2Q9GZP9 239 aa8.99□□□□□ -0.97
PTCHD4-201ENST00000339488 PORCNQ9H237 461 aa8.99□□□□□ -0.97
PTCHD4-201ENST00000339488 CACYBPQ9HB71 228 aaKnown RBP8.99□□□□□ -0.97
PTCHD4-201ENST00000339488 PRDM7Q9NQW5 492 aa8.99□□□□□ -0.97
PTCHD4-201ENST00000339488 ARID1AO14497 2285 aa8.99□□□□□ -0.97
PTCHD4-201ENST00000339488 A0A0G2JN53 185 aa8.99□□□□□ -0.97
PTCHD4-201ENST00000339488 A0A1W2PPE2 198 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms