RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 CCNB1IP1Q9NPC3 277 aa6.81□□□□□ -1.32
SRFBP1-201ENST00000339397 PRMT8Q9NR22 394 aaPredicted RBP6.81□□□□□ -1.32
SRFBP1-201ENST00000339397 OCIAD1Q9NX40 245 aa6.81□□□□□ -1.32
SRFBP1-201ENST00000339397 SEMA5BQ9P283 1151 aa6.81□□□□□ -1.32
SRFBP1-201ENST00000339397 FBXL4Q9UKA2 621 aa6.81□□□□□ -1.32
SRFBP1-201ENST00000339397 PRRC2CQ9Y520 2896 aaKnown RBP6.81□□□□□ -1.32
SRFBP1-201ENST00000339397 LOC100506127A0A0U1RQW1 187 aa6.81□□□□□ -1.32
SRFBP1-201ENST00000339397 GABARAPO95166 117 aa6.81□□□□□ -1.32
SRFBP1-201ENST00000339397 IGKV3-11P04433 115 aa6.81□□□□□ -1.32
SRFBP1-201ENST00000339397 HBQ1P09105 142 aa6.81□□□□□ -1.32
SRFBP1-201ENST00000339397 TBXA2RP21731 343 aa6.81□□□□□ -1.32
SRFBP1-201ENST00000339397 FBLP22087 321 aaKnown RBP6.81□□□□□ -1.32
SRFBP1-201ENST00000339397 GAS1P54826 345 aa6.81□□□□□ -1.32
SRFBP1-201ENST00000339397 CSNK2BP67870 215 aa6.81□□□□□ -1.32
SRFBP1-201ENST00000339397 SIGLEC14Q08ET2 396 aa6.81□□□□□ -1.32
SRFBP1-201ENST00000339397 DSG2Q14126 1118 aa6.81□□□□□ -1.32
SRFBP1-201ENST00000339397 EIPR1Q53HC9 387 aa6.81□□□□□ -1.32
SRFBP1-201ENST00000339397 TRIM61Q5EBN2 209 aa6.81□□□□□ -1.32
SRFBP1-201ENST00000339397 ALG10BQ5I7T1 473 aa6.81□□□□□ -1.32
SRFBP1-201ENST00000339397 MAMSTRQ6ZN01 415 aa6.81□□□□□ -1.32
SRFBP1-201ENST00000339397 ZNF620Q6ZNG0 422 aa6.81□□□□□ -1.32
SRFBP1-201ENST00000339397 RASSF6Q6ZTQ3 369 aa6.81□□□□□ -1.32
SRFBP1-201ENST00000339397 WDR5BQ86VZ2 330 aa6.81□□□□□ -1.32
SRFBP1-201ENST00000339397 C9orf40Q8IXQ3 194 aa6.81□□□□□ -1.32
SRFBP1-201ENST00000339397 SLC34A3Q8N130 599 aa6.81□□□□□ -1.32
SRFBP1-201ENST00000339397 FAM26EQ8N5C1 309 aa6.81□□□□□ -1.32
SRFBP1-201ENST00000339397 TEX47Q8TBZ9 253 aa6.81□□□□□ -1.32
SRFBP1-201ENST00000339397 PMEPA1Q969W9 287 aa6.81□□□□□ -1.32
SRFBP1-201ENST00000339397 LGALS12Q96DT0 336 aa6.81□□□□□ -1.32
SRFBP1-201ENST00000339397 CENPOQ9BU64 300 aa6.81□□□□□ -1.32
SRFBP1-201ENST00000339397 UBQLN3Q9H347 655 aa6.81□□□□□ -1.32
SRFBP1-201ENST00000339397 ZNF768Q9H5H4 540 aaKnown RBP6.81□□□□□ -1.32
SRFBP1-201ENST00000339397 CACYBPQ9HB71 228 aaKnown RBP6.81□□□□□ -1.32
SRFBP1-201ENST00000339397 SIDT1Q9NXL6 827 aaKnown RBP6.81□□□□□ -1.32
SRFBP1-201ENST00000339397 ENOPH1Q9UHY7 261 aa6.81□□□□□ -1.32
SRFBP1-201ENST00000339397 CORINQ9Y5Q5 1042 aa6.81□□□□□ -1.32
SRFBP1-201ENST00000339397 A0A0B4J2E0 115 aa6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 CCDC163A0A0D9SF12 145 aa6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 A0A1B0GX12 115 aa6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 A0A1B0GX78 115 aa6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 J3QRK9 145 aa6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 SOCS6O14544 535 aa6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 IMPA2O14732 288 aa6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 TPD52L2O43399 206 aaKnown RBP6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 ZNF354AO60765 605 aaPredicted RBP6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 BCL10O95999 233 aa6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 CSTAP01040 98 aa6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 CLUP10909 449 aa6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 FPR3P25089 353 aa6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 CALRP27797 417 aaKnown RBP6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 HOXA6P31267 233 aa6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 ETV5P41161 510 aa6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 ETV1P50549 477 aa6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 BMXP51813 675 aa6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 SMSP52788 366 aa6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 ATP12AP54707 1039 aa6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 EMP3P54852 163 aa6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 TBCEQ15813 527 aaPredicted RBP6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 OR2G6Q5TZ20 316 aa6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 FAM199XQ6PEV8 388 aaPredicted RBP6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 GHDCQ8N2G8 530 aa6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 SVOPQ8N4V2 548 aa6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 OR4F15Q8NGB8 312 aa6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 OR52I1Q8NGK6 324 aa6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 STT3BQ8TCJ2 826 aa6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 ADIPOR1Q96A54 375 aa6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 NACC2Q96BF6 587 aa6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 BPIFA2Q96DR5 249 aa6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 SH3YL1Q96HL8 342 aaPredicted RBP6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 TNFRSF13CQ96RJ3 184 aa6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 POLDIP3Q9BY77 421 aaKnown RBP6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 OR52D1Q9H346 318 aa6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 RERGLQ9H628 205 aa6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 TBC1D23Q9NUY8 699 aa6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 FRYQ5TBA9 3013 aa6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 TEX51A0A1B0GUA7 166 aa6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 TCRBV16S1A1N1A0A5B0 115 aa6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 SH3D21A4FU49 640 aa6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 ARHGAP33O14559 1287 aa6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 DSCR3O14972 297 aa6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 SURF4O15260 269 aa6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 NOL3O60936 208 aaKnown RBP6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 CNOT3O75175 753 aaKnown RBP6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 SAGP10523 405 aaPredicted RBP6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 MST1P26927 711 aa6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 RGS6P49758 472 aa6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 NR0B1P51843 470 aaKnown RBP6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 FHL1Q13642 323 aa6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 SERTAD2Q14140 314 aa6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 FGFBP1Q14512 234 aa6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 NR0B2Q15466 257 aa6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 ZNF141Q15928 474 aa6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 SSX1Q16384 188 aa6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 TSTQ16762 297 aaKnown RBP6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 KLHL26Q53HC5 615 aa6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 TMEM201Q5SNT2 666 aa6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 AP1ARQ63HQ0 302 aa6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 PRSS42Q7Z5A4 293 aa6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 LHFPL3Q86UP9 236 aa6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 IGFN1Q86VF2 1251 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms