RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 KLHL26Q53HC5 615 aa20.63■□□□□ 0.89
PDLIM2-203ENST00000339162 ALG10BQ5I7T1 473 aa20.63■□□□□ 0.89
PDLIM2-203ENST00000339162 SYT6Q5T7P8 510 aaPredicted RBP20.63■□□□□ 0.89
PDLIM2-203ENST00000339162 ZNF620Q6ZNG0 422 aa20.63■□□□□ 0.89
PDLIM2-203ENST00000339162 PLPP5Q8NEB5 264 aa20.63■□□□□ 0.89
PDLIM2-203ENST00000339162 OR1N1Q8NGS0 311 aa20.63■□□□□ 0.89
PDLIM2-203ENST00000339162 OR4Q3Q8NH05 313 aa20.63■□□□□ 0.89
PDLIM2-203ENST00000339162 POLDIP3Q9BY77 421 aaKnown RBP20.63■□□□□ 0.89
PDLIM2-203ENST00000339162 C14orf105Q9NVL8 296 aa20.63■□□□□ 0.89
PDLIM2-203ENST00000339162 COPS7AQ9UBW8 275 aa20.63■□□□□ 0.89
PDLIM2-203ENST00000339162 CFL2Q9Y281 166 aa20.63■□□□□ 0.89
PDLIM2-203ENST00000339162 FRG2CA6NGY1 282 aa20.62■□□□□ 0.89
PDLIM2-203ENST00000339162 MRPS14O60783 128 aaKnown RBP20.62■□□□□ 0.89
PDLIM2-203ENST00000339162 NOL3O60936 208 aaKnown RBP20.62■□□□□ 0.89
PDLIM2-203ENST00000339162 IL33O95760 270 aa20.62■□□□□ 0.89
PDLIM2-203ENST00000339162 HPGDP15428 266 aa20.62■□□□□ 0.89
PDLIM2-203ENST00000339162 ACVR2AP27037 513 aa20.62■□□□□ 0.89
PDLIM2-203ENST00000339162 PSMD4P55036 377 aaKnown RBP20.62■□□□□ 0.89
PDLIM2-203ENST00000339162 TMBIM6P55061 237 aa20.62■□□□□ 0.89
PDLIM2-203ENST00000339162 DCDP81605 110 aaKnown RBP20.62■□□□□ 0.89
PDLIM2-203ENST00000339162 KIRREL2Q6UWL6 708 aa20.62■□□□□ 0.89
PDLIM2-203ENST00000339162 HSDL2Q6YN16 418 aa20.62■□□□□ 0.89
PDLIM2-203ENST00000339162 SLC16A12Q6ZSM3 486 aa20.62■□□□□ 0.89
PDLIM2-203ENST00000339162 SAMD8Q96LT4 415 aa20.62■□□□□ 0.89
PDLIM2-203ENST00000339162 TGIF2Q9GZN2 237 aa20.62■□□□□ 0.89
PDLIM2-203ENST00000339162 IL20Q9NYY1 176 aa20.62■□□□□ 0.89
PDLIM2-203ENST00000339162 OIP5O43482 229 aa20.62■□□□□ 0.89
PDLIM2-203ENST00000339162 REM1O75628 298 aa20.62■□□□□ 0.89
PDLIM2-203ENST00000339162 HEXBP07686 556 aa20.62■□□□□ 0.89
PDLIM2-203ENST00000339162 CSTF2P33240 577 aaKnown RBP eCLIP20.62■□□□□ 0.89
PDLIM2-203ENST00000339162 FAM69BQ5VUD6 431 aa20.62■□□□□ 0.89
PDLIM2-203ENST00000339162 HLA-DQA1Q5Y7H0 255 aa20.62■□□□□ 0.89
PDLIM2-203ENST00000339162 Q96MT0 163 aa20.62■□□□□ 0.89
PDLIM2-203ENST00000339162 ENKD1Q9H0I2 346 aa20.62■□□□□ 0.89
PDLIM2-203ENST00000339162 UBQLN4Q9NRR5 601 aa20.62■□□□□ 0.89
PDLIM2-203ENST00000339162 IGLV3-12A0A075B6K2 115 aa20.61■□□□□ 0.89
PDLIM2-203ENST00000339162 CHP2O43745 196 aa20.61■□□□□ 0.89
PDLIM2-203ENST00000339162 UTS2O95399 124 aa20.61■□□□□ 0.89
PDLIM2-203ENST00000339162 PTHP01270 115 aa20.61■□□□□ 0.89
PDLIM2-203ENST00000339162 NGFRP08138 427 aa20.61■□□□□ 0.89
PDLIM2-203ENST00000339162 DUSP3P51452 185 aaPredicted RBP20.61■□□□□ 0.89
PDLIM2-203ENST00000339162 EFNB1P98172 346 aa20.61■□□□□ 0.89
PDLIM2-203ENST00000339162 SYT14P1Q58G82 188 aa20.61■□□□□ 0.89
PDLIM2-203ENST00000339162 TMEM201Q5SNT2 666 aa20.61■□□□□ 0.89
PDLIM2-203ENST00000339162 CBLN3Q6UW01 205 aa20.61■□□□□ 0.89
PDLIM2-203ENST00000339162 ZNF550Q7Z398 422 aa20.61■□□□□ 0.89
PDLIM2-203ENST00000339162 PHOSPHO1Q8TCT1 267 aa20.61■□□□□ 0.89
PDLIM2-203ENST00000339162 BPIFA2Q96DR5 249 aa20.61■□□□□ 0.89
PDLIM2-203ENST00000339162 TRIM2Q9C040 744 aa20.61■□□□□ 0.89
PDLIM2-203ENST00000339162 WWTR1Q9GZV5 400 aa20.61■□□□□ 0.89
PDLIM2-203ENST00000339162 KRCC1Q9NPI7 259 aaPredicted RBP20.61■□□□□ 0.89
PDLIM2-203ENST00000339162 MED31Q9Y3C7 131 aa20.61■□□□□ 0.89
PDLIM2-203ENST00000339162 HEATR5AQ86XA9 2040 aa20.61■□□□□ 0.89
PDLIM2-203ENST00000339162 EFCAB10A6NFE3 127 aa20.61■□□□□ 0.89
PDLIM2-203ENST00000339162 UNC119BA6NIH7 251 aa20.61■□□□□ 0.89
PDLIM2-203ENST00000339162 NTN3O00634 580 aaPredicted RBP20.61■□□□□ 0.89
PDLIM2-203ENST00000339162 GMFGO60234 142 aa20.61■□□□□ 0.89
PDLIM2-203ENST00000339162 CNOT3O75175 753 aaKnown RBP20.61■□□□□ 0.89
PDLIM2-203ENST00000339162 SLC15A1P46059 708 aa20.61■□□□□ 0.89
PDLIM2-203ENST00000339162 ZNF91Q05481 1191 aa20.61■□□□□ 0.89
PDLIM2-203ENST00000339162 RNF113BQ8IZP6 322 aaKnown RBP20.61■□□□□ 0.89
PDLIM2-203ENST00000339162 FAM26EQ8N5C1 309 aa20.61■□□□□ 0.89
PDLIM2-203ENST00000339162 LSMEM1Q8N8F7 131 aa20.61■□□□□ 0.89
PDLIM2-203ENST00000339162 OSTF1Q92882 214 aa20.61■□□□□ 0.89
PDLIM2-203ENST00000339162 RTN4RQ9BZR6 473 aa20.61■□□□□ 0.89
PDLIM2-203ENST00000339162 C17orf51A8MQB3 221 aa20.6■□□□□ 0.89
PDLIM2-203ENST00000339162 ICOSLGO75144 302 aa20.6■□□□□ 0.89
PDLIM2-203ENST00000339162 SAGP10523 405 aaPredicted RBP20.6■□□□□ 0.89
PDLIM2-203ENST00000339162 CCL4P13236 92 aa20.6■□□□□ 0.89
PDLIM2-203ENST00000339162 AVPR2P30518 371 aa20.6■□□□□ 0.89
PDLIM2-203ENST00000339162 ST13P50502 369 aaKnown RBP20.6■□□□□ 0.89
PDLIM2-203ENST00000339162 CCR4P51679 360 aa20.6■□□□□ 0.89
PDLIM2-203ENST00000339162 FXYD6P3P58550 94 aa20.6■□□□□ 0.89
PDLIM2-203ENST00000339162 LSM3P62310 102 aaKnown RBP20.6■□□□□ 0.89
PDLIM2-203ENST00000339162 PRKCDQ05655 676 aa20.6■□□□□ 0.89
PDLIM2-203ENST00000339162 ZNF385CQ66K41 422 aaPredicted RBP20.6■□□□□ 0.89
PDLIM2-203ENST00000339162 C16orf47Q6ZP98 133 aaPredicted RBP20.6■□□□□ 0.89
PDLIM2-203ENST00000339162 RAB2BQ8WUD1 216 aa20.6■□□□□ 0.89
PDLIM2-203ENST00000339162 FGF11Q92914 225 aa20.6■□□□□ 0.89
PDLIM2-203ENST00000339162 ART5Q96L15 291 aa20.6■□□□□ 0.89
PDLIM2-203ENST00000339162 RPS6KB2Q9UBS0 482 aa20.6■□□□□ 0.89
PDLIM2-203ENST00000339162 CARD8Q9Y2G2 431 aa20.6■□□□□ 0.89
PDLIM2-203ENST00000339162 CDH10Q9Y6N8 788 aa20.6■□□□□ 0.89
PDLIM2-203ENST00000339162 SCDO00767 359 aa20.59■□□□□ 0.89
PDLIM2-203ENST00000339162 SLC2A10O95528 541 aa20.59■□□□□ 0.89
PDLIM2-203ENST00000339162 ADORA3P0DMS8 318 aa20.59■□□□□ 0.89
PDLIM2-203ENST00000339162 DBTP11182 482 aaKnown RBP20.59■□□□□ 0.89
PDLIM2-203ENST00000339162 ZNF28P17035 718 aa20.59■□□□□ 0.89
PDLIM2-203ENST00000339162 CCNA2P20248 432 aa20.59■□□□□ 0.89
PDLIM2-203ENST00000339162 TBCEQ15813 527 aaPredicted RBP20.59■□□□□ 0.89
PDLIM2-203ENST00000339162 OCLNQ16625 522 aa20.59■□□□□ 0.89
PDLIM2-203ENST00000339162 UBE2UQ5VVX9 321 aa20.59■□□□□ 0.89
PDLIM2-203ENST00000339162 PLAG1Q6DJT9 500 aa20.59■□□□□ 0.89
PDLIM2-203ENST00000339162 SLC29A4Q7RTT9 530 aa20.59■□□□□ 0.89
PDLIM2-203ENST00000339162 ANKRD37Q7Z713 158 aa20.59■□□□□ 0.89
PDLIM2-203ENST00000339162 CMIPQ8IY22 773 aa20.59■□□□□ 0.89
PDLIM2-203ENST00000339162 OR13C2Q8NGS9 318 aa20.59■□□□□ 0.89
PDLIM2-203ENST00000339162 PMEPA1Q969W9 287 aa20.59■□□□□ 0.89
PDLIM2-203ENST00000339162 ZNF582Q96NG8 517 aaPredicted RBP20.59■□□□□ 0.89
PDLIM2-203ENST00000339162 KLHDC3Q9BQ90 382 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms