RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 FIS1Q9Y3D6 152 aa13.91□□□□□ -0.18
LINC01116-202ENST00000339037 MAGED1Q9Y5V3 778 aaPredicted RBP13.91□□□□□ -0.18
LINC01116-202ENST00000339037 CHD3Q12873 2000 aaKnown RBP13.91□□□□□ -0.18
LINC01116-202ENST00000339037 A0A1W2PQD3 144 aa13.9□□□□□ -0.18
LINC01116-202ENST00000339037 AKAP10O43572 662 aa13.9□□□□□ -0.18
LINC01116-202ENST00000339037 ALOX5P09917 674 aa13.9□□□□□ -0.18
LINC01116-202ENST00000339037 LINGO3P0C6S8 592 aa13.9□□□□□ -0.18
LINC01116-202ENST00000339037 DANCRP0C864 163 aa13.9□□□□□ -0.18
LINC01116-202ENST00000339037 PRPH2P23942 346 aa13.9□□□□□ -0.18
LINC01116-202ENST00000339037 ADH6P28332 368 aa13.9□□□□□ -0.18
LINC01116-202ENST00000339037 SHC1P29353 583 aa13.9□□□□□ -0.18
LINC01116-202ENST00000339037 IDUAP35475 653 aa13.9□□□□□ -0.18
LINC01116-202ENST00000339037 FOXF1Q12946 379 aa13.9□□□□□ -0.18
LINC01116-202ENST00000339037 TSC22D1Q15714 1073 aa13.9□□□□□ -0.18
LINC01116-202ENST00000339037 ZNF385BQ569K4 471 aa13.9□□□□□ -0.18
LINC01116-202ENST00000339037 NCMAPQ5T1S8 102 aa13.9□□□□□ -0.18
LINC01116-202ENST00000339037 SFRP5Q5T4F7 317 aa13.9□□□□□ -0.18
LINC01116-202ENST00000339037 CCNJQ5T5M9 372 aa13.9□□□□□ -0.18
LINC01116-202ENST00000339037 TUSC5Q8IXB3 177 aa13.9□□□□□ -0.18
LINC01116-202ENST00000339037 BANPQ8N9N5 519 aa13.9□□□□□ -0.18
LINC01116-202ENST00000339037 HSD17B8Q92506 261 aa13.9□□□□□ -0.18
LINC01116-202ENST00000339037 KISS1RQ969F8 398 aaPredicted RBP13.9□□□□□ -0.18
LINC01116-202ENST00000339037 OTUB1Q96FW1 271 aaPredicted RBP13.9□□□□□ -0.18
LINC01116-202ENST00000339037 TSSK3Q96PN8 268 aa13.9□□□□□ -0.18
LINC01116-202ENST00000339037 GATA5Q9BWX5 397 aaPredicted RBP13.9□□□□□ -0.18
LINC01116-202ENST00000339037 TUBB1Q9H4B7 451 aa13.9□□□□□ -0.18
LINC01116-202ENST00000339037 REEP4Q9H6H4 257 aa13.9□□□□□ -0.18
LINC01116-202ENST00000339037 GP6Q9HCN6 339 aa13.9□□□□□ -0.18
LINC01116-202ENST00000339037 ACSS1Q9NUB1 689 aaPredicted RBP13.9□□□□□ -0.18
LINC01116-202ENST00000339037 PLA2G2EQ9NZK7 142 aa13.9□□□□□ -0.18
LINC01116-202ENST00000339037 SH3BP4Q9P0V3 963 aa13.9□□□□□ -0.18
LINC01116-202ENST00000339037 LIPT1Q9Y234 373 aa13.9□□□□□ -0.18
LINC01116-202ENST00000339037 A0A1W2PP18 115 aa13.89□□□□□ -0.19
LINC01116-202ENST00000339037 GJE1A6NN92 205 aa13.89□□□□□ -0.19
LINC01116-202ENST00000339037 NPIPB8E9PQR5 432 aa13.89□□□□□ -0.19
LINC01116-202ENST00000339037 AZIN1O14977 448 aa13.89□□□□□ -0.19
LINC01116-202ENST00000339037 RGS14O43566 566 aa13.89□□□□□ -0.19
LINC01116-202ENST00000339037 TBX19O60806 448 aa13.89□□□□□ -0.19
LINC01116-202ENST00000339037 NTN1O95631 604 aa13.89□□□□□ -0.19
LINC01116-202ENST00000339037 HSPA4LO95757 839 aa13.89□□□□□ -0.19
LINC01116-202ENST00000339037 NUDT14O95848 222 aa13.89□□□□□ -0.19
LINC01116-202ENST00000339037 SDC1P18827 310 aa13.89□□□□□ -0.19
LINC01116-202ENST00000339037 CDKN1AP38936 164 aa13.89□□□□□ -0.19
LINC01116-202ENST00000339037 ZNF117Q03924 483 aa13.89□□□□□ -0.19
LINC01116-202ENST00000339037 PDE7AQ13946 482 aa13.89□□□□□ -0.19
LINC01116-202ENST00000339037 P2RY6Q15077 328 aa13.89□□□□□ -0.19
LINC01116-202ENST00000339037 ZNF672Q499Z4 452 aaPredicted RBP13.89□□□□□ -0.19
LINC01116-202ENST00000339037 ZCCHC12Q6PEW1 402 aa13.89□□□□□ -0.19
LINC01116-202ENST00000339037 Q6ZSR9 355 aa13.89□□□□□ -0.19
LINC01116-202ENST00000339037 NUFIP2Q7Z417 695 aaKnown RBP13.89□□□□□ -0.19
LINC01116-202ENST00000339037 CLHC1Q8NHS4 586 aa13.89□□□□□ -0.19
LINC01116-202ENST00000339037 CHMP6Q96FZ7 201 aa13.89□□□□□ -0.19
LINC01116-202ENST00000339037 C16orf58Q96GQ5 468 aa13.89□□□□□ -0.19
LINC01116-202ENST00000339037 APOPT1Q96IL0 206 aa13.89□□□□□ -0.19
LINC01116-202ENST00000339037 SRXN1Q9BYN0 137 aa13.89□□□□□ -0.19
LINC01116-202ENST00000339037 POTEKPQ9BYX7 375 aa13.89□□□□□ -0.19
LINC01116-202ENST00000339037 SLCO5A1Q9H2Y9 848 aa13.89□□□□□ -0.19
LINC01116-202ENST00000339037 TLDC2A0PJX2 215 aa13.88□□□□□ -0.19
LINC01116-202ENST00000339037 TMEM233B4DJY2 109 aa13.88□□□□□ -0.19
LINC01116-202ENST00000339037 SLC28A1O00337 649 aa13.88□□□□□ -0.19
LINC01116-202ENST00000339037 CHRNGP07510 517 aa13.88□□□□□ -0.19
LINC01116-202ENST00000339037 NEFHP12036 1026 aa13.88□□□□□ -0.19
LINC01116-202ENST00000339037 ACVR1BP36896 505 aa13.88□□□□□ -0.19
LINC01116-202ENST00000339037 FRKP42685 505 aaPredicted RBP13.88□□□□□ -0.19
LINC01116-202ENST00000339037 POU6F2P78424 691 aaPredicted RBP13.88□□□□□ -0.19
LINC01116-202ENST00000339037 BSPH1Q075Z2 132 aa13.88□□□□□ -0.19
LINC01116-202ENST00000339037 FAPQ12884 760 aa13.88□□□□□ -0.19
LINC01116-202ENST00000339037 ITGADQ13349 1161 aa13.88□□□□□ -0.19
LINC01116-202ENST00000339037 KANK2Q63ZY3 851 aa13.88□□□□□ -0.19
LINC01116-202ENST00000339037 FCRLAQ7L513 359 aa13.88□□□□□ -0.19
LINC01116-202ENST00000339037 ATG4DQ86TL0 474 aaPredicted RBP13.88□□□□□ -0.19
LINC01116-202ENST00000339037 KBTBD8Q8NFY9 601 aa13.88□□□□□ -0.19
LINC01116-202ENST00000339037 PHOSPHO1Q8TCT1 267 aa13.88□□□□□ -0.19
LINC01116-202ENST00000339037 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.88□□□□□ -0.19
LINC01116-202ENST00000339037 NEUROG1Q92886 237 aa13.88□□□□□ -0.19
LINC01116-202ENST00000339037 FCRL1Q96LA6 429 aa13.88□□□□□ -0.19
LINC01116-202ENST00000339037 MECRQ9BV79 373 aa13.88□□□□□ -0.19
LINC01116-202ENST00000339037 BTBD2Q9BX70 525 aa13.88□□□□□ -0.19
LINC01116-202ENST00000339037 DUSP22Q9NRW4 184 aa13.88□□□□□ -0.19
LINC01116-202ENST00000339037 ZCCHC3Q9NUD5 404 aaKnown RBP13.88□□□□□ -0.19
LINC01116-202ENST00000339037 MKS1Q9NXB0 559 aa13.88□□□□□ -0.19
LINC01116-202ENST00000339037 MID2Q9UJV3 735 aa13.88□□□□□ -0.19
LINC01116-202ENST00000339037 DNAJC15Q9Y5T4 150 aa13.88□□□□□ -0.19
LINC01116-202ENST00000339037 H3BNH8 94 aa13.87□□□□□ -0.19
LINC01116-202ENST00000339037 ZNF195O14628 629 aa13.87□□□□□ -0.19
LINC01116-202ENST00000339037 TLX2O43763 284 aaPredicted RBP13.87□□□□□ -0.19
LINC01116-202ENST00000339037 TRIM13O60858 407 aa13.87□□□□□ -0.19
LINC01116-202ENST00000339037 PRKD3O94806 890 aa13.87□□□□□ -0.19
LINC01116-202ENST00000339037 ADAP00813 363 aa13.87□□□□□ -0.19
LINC01116-202ENST00000339037 IGHV4-39P01824 125 aa13.87□□□□□ -0.19
LINC01116-202ENST00000339037 FESP07332 822 aa13.87□□□□□ -0.19
LINC01116-202ENST00000339037 YES1P07947 543 aa13.87□□□□□ -0.19
LINC01116-202ENST00000339037 LINC00032P0C843 101 aa13.87□□□□□ -0.19
LINC01116-202ENST00000339037 EFNA1P20827 205 aaPredicted RBP13.87□□□□□ -0.19
LINC01116-202ENST00000339037 ATP6V1C1P21283 382 aa13.87□□□□□ -0.19
LINC01116-202ENST00000339037 ALDH3A1P30838 453 aa13.87□□□□□ -0.19
LINC01116-202ENST00000339037 VSNL1P62760 191 aa13.87□□□□□ -0.19
LINC01116-202ENST00000339037 RPL38P63173 70 aaKnown RBP13.87□□□□□ -0.19
LINC01116-202ENST00000339037 LASP1Q14847 261 aaKnown RBP13.87□□□□□ -0.19
LINC01116-202ENST00000339037 PGGHGQ32M88 737 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms