RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 ACTR6Q9GZN1 396 aa12.8□□□□□ -0.36
SYNE3-201ENST00000334258 TTYH1Q9H313 450 aaPredicted RBP12.8□□□□□ -0.36
SYNE3-201ENST00000334258 GLIPR2Q9H4G4 154 aa12.8□□□□□ -0.36
SYNE3-201ENST00000334258 MGAT4CQ9UBM8 478 aa12.8□□□□□ -0.36
SYNE3-201ENST00000334258 GPR55Q9Y2T6 319 aaPredicted RBP12.8□□□□□ -0.36
SYNE3-201ENST00000334258 CHURC1-FNTBB4DL54 471 aa12.8□□□□□ -0.36
SYNE3-201ENST00000334258 GRM6O15303 877 aa12.8□□□□□ -0.36
SYNE3-201ENST00000334258 ABLIM3O94929 683 aa12.8□□□□□ -0.36
SYNE3-201ENST00000334258 UBL3O95164 117 aa12.8□□□□□ -0.36
SYNE3-201ENST00000334258 IGHA1P01876 353 aa12.8□□□□□ -0.36
SYNE3-201ENST00000334258 VEGFCP49767 419 aa12.8□□□□□ -0.36
SYNE3-201ENST00000334258 PCBP4P57723 403 aaKnown RBP12.8□□□□□ -0.36
SYNE3-201ENST00000334258 SLC22A10Q63ZE4 541 aa12.8□□□□□ -0.36
SYNE3-201ENST00000334258 FAM198BQ6UWH4 519 aa12.8□□□□□ -0.36
SYNE3-201ENST00000334258 ALKAL2Q6UX46 152 aa12.8□□□□□ -0.36
SYNE3-201ENST00000334258 LINGO2Q7L985 606 aa12.8□□□□□ -0.36
SYNE3-201ENST00000334258 KLHDC8AQ8IYD2 350 aa12.8□□□□□ -0.36
SYNE3-201ENST00000334258 C7orf61Q8IZ16 206 aa12.8□□□□□ -0.36
SYNE3-201ENST00000334258 MEIOBQ8N635 442 aa12.8□□□□□ -0.36
SYNE3-201ENST00000334258 C12orf76Q8N812 135 aaPredicted RBP12.8□□□□□ -0.36
SYNE3-201ENST00000334258 OR4D9Q8NGE8 314 aa12.8□□□□□ -0.36
SYNE3-201ENST00000334258 VOPP1Q96AW1 172 aa12.8□□□□□ -0.36
SYNE3-201ENST00000334258 C16orf58Q96GQ5 468 aa12.8□□□□□ -0.36
SYNE3-201ENST00000334258 NDC1Q9BTX1 674 aa12.8□□□□□ -0.36
SYNE3-201ENST00000334258 C20orf85Q9H1P6 137 aa12.8□□□□□ -0.36
SYNE3-201ENST00000334258 KLHL28Q9NXS3 571 aa12.8□□□□□ -0.36
SYNE3-201ENST00000334258 SAGE1Q9NXZ1 904 aa12.8□□□□□ -0.36
SYNE3-201ENST00000334258 KCMF1Q9P0J7 381 aa12.8□□□□□ -0.36
SYNE3-201ENST00000334258 MARK1Q9P0L2 795 aa12.8□□□□□ -0.36
SYNE3-201ENST00000334258 RPS6KB2Q9UBS0 482 aa12.8□□□□□ -0.36
SYNE3-201ENST00000334258 PFDN2Q9UHV9 154 aa12.8□□□□□ -0.36
SYNE3-201ENST00000334258 POMT2Q9UKY4 750 aa12.8□□□□□ -0.36
SYNE3-201ENST00000334258 TP53BP1Q12888 1972 aaPredicted RBP12.8□□□□□ -0.36
SYNE3-201ENST00000334258 HELZP42694 1942 aaKnown RBP12.79□□□□□ -0.36
SYNE3-201ENST00000334258 LRG1P02750 347 aa12.79□□□□□ -0.36
SYNE3-201ENST00000334258 MT-ND5P03915 603 aa12.79□□□□□ -0.36
SYNE3-201ENST00000334258 C8orf89P0DMQ9 161 aa12.79□□□□□ -0.36
SYNE3-201ENST00000334258 NDUFV2P19404 249 aa12.79□□□□□ -0.36
SYNE3-201ENST00000334258 NTSP30990 170 aa12.79□□□□□ -0.36
SYNE3-201ENST00000334258 SSR2P43308 183 aa12.79□□□□□ -0.36
SYNE3-201ENST00000334258 ANXA11P50995 505 aaKnown RBP12.79□□□□□ -0.36
SYNE3-201ENST00000334258 ZP1P60852 638 aa12.79□□□□□ -0.36
SYNE3-201ENST00000334258 TGM3Q08188 693 aa12.79□□□□□ -0.36
SYNE3-201ENST00000334258 ACSM1Q08AH1 577 aa12.79□□□□□ -0.36
SYNE3-201ENST00000334258 ACSM3Q53FZ2 586 aa12.79□□□□□ -0.36
SYNE3-201ENST00000334258 HACD4Q5VWC8 232 aa12.79□□□□□ -0.36
SYNE3-201ENST00000334258 ZNF704Q6ZNC4 412 aaPredicted RBP12.79□□□□□ -0.36
SYNE3-201ENST00000334258 NUDT13Q86X67 352 aa12.79□□□□□ -0.36
SYNE3-201ENST00000334258 CCDC116Q8IYX3 515 aa12.79□□□□□ -0.36
SYNE3-201ENST00000334258 OR13C5Q8NGS8 318 aa12.79□□□□□ -0.36
SYNE3-201ENST00000334258 OR2A12Q8NGT7 310 aa12.79□□□□□ -0.36
SYNE3-201ENST00000334258 SORCS1Q8WY21 1168 aa12.79□□□□□ -0.36
SYNE3-201ENST00000334258 AIF1LQ9BQI0 150 aa12.79□□□□□ -0.36
SYNE3-201ENST00000334258 ZNF649Q9BS31 505 aa12.79□□□□□ -0.36
SYNE3-201ENST00000334258 CD93Q9NPY3 652 aa12.79□□□□□ -0.36
SYNE3-201ENST00000334258 EXOGQ9Y2C4 368 aaKnown RBP12.79□□□□□ -0.36
SYNE3-201ENST00000334258 BACE2Q9Y5Z0 518 aa12.79□□□□□ -0.36
SYNE3-201ENST00000334258 NEDD8-MDP1E9PL57 170 aa12.79□□□□□ -0.36
SYNE3-201ENST00000334258 PPM1DO15297 605 aa12.79□□□□□ -0.36
SYNE3-201ENST00000334258 OR1F1O43749 312 aa12.79□□□□□ -0.36
SYNE3-201ENST00000334258 PIP5K1CO60331 668 aa12.79□□□□□ -0.36
SYNE3-201ENST00000334258 STX11O75558 287 aa12.79□□□□□ -0.36
SYNE3-201ENST00000334258 GAAP10253 952 aa12.79□□□□□ -0.36
SYNE3-201ENST00000334258 PRG2P13727 222 aa12.79□□□□□ -0.36
SYNE3-201ENST00000334258 DRD2P14416 443 aa12.79□□□□□ -0.36
SYNE3-201ENST00000334258 PYCR1P32322 319 aa12.79□□□□□ -0.36
SYNE3-201ENST00000334258 BSGP35613 385 aa12.79□□□□□ -0.36
SYNE3-201ENST00000334258 OMPP47874 163 aa12.79□□□□□ -0.36
SYNE3-201ENST00000334258 C9orf64Q5T6V5 341 aa12.79□□□□□ -0.36
SYNE3-201ENST00000334258 Q6ZTK2 550 aa12.79□□□□□ -0.36
SYNE3-201ENST00000334258 AMER3Q8N944 861 aa12.79□□□□□ -0.36
SYNE3-201ENST00000334258 UXS1Q8NBZ7 420 aa12.79□□□□□ -0.36
SYNE3-201ENST00000334258 KLHL15Q96M94 604 aa12.79□□□□□ -0.36
SYNE3-201ENST00000334258 TOX2Q96NM4 488 aa12.79□□□□□ -0.36
SYNE3-201ENST00000334258 TMEM106CQ9BVX2 250 aa12.79□□□□□ -0.36
SYNE3-201ENST00000334258 WDR26Q9H7D7 661 aa12.79□□□□□ -0.36
SYNE3-201ENST00000334258 AUNIPQ9H7T9 357 aa12.79□□□□□ -0.36
SYNE3-201ENST00000334258 ZNF69Q9UC07 566 aa12.79□□□□□ -0.36
SYNE3-201ENST00000334258 PRKAG2Q9UGJ0 569 aa12.79□□□□□ -0.36
SYNE3-201ENST00000334258 KCNE3Q9Y6H6 103 aa12.79□□□□□ -0.36
SYNE3-201ENST00000334258 ZP3P21754 424 aa12.79□□□□□ -0.36
SYNE3-201ENST00000334258 CTNNB1P35222 781 aa12.79□□□□□ -0.36
SYNE3-201ENST00000334258 GDNFP39905 211 aa12.79□□□□□ -0.36
SYNE3-201ENST00000334258 STAT5AP42229 794 aa12.79□□□□□ -0.36
SYNE3-201ENST00000334258 ZNF750Q32MQ0 723 aa12.79□□□□□ -0.36
SYNE3-201ENST00000334258 MRGPREQ86SM8 312 aa12.79□□□□□ -0.36
SYNE3-201ENST00000334258 GCDHQ92947 438 aaPredicted RBP12.79□□□□□ -0.36
SYNE3-201ENST00000334258 TRMT2BQ96GJ1 504 aaKnown RBP12.79□□□□□ -0.36
SYNE3-201ENST00000334258 CXorf58Q96LI9 332 aa12.79□□□□□ -0.36
SYNE3-201ENST00000334258 C12orf57Q99622 126 aa12.79□□□□□ -0.36
SYNE3-201ENST00000334258 ORAI3Q9BRQ5 295 aa12.79□□□□□ -0.36
SYNE3-201ENST00000334258 RCE1Q9Y256 329 aa12.79□□□□□ -0.36
SYNE3-201ENST00000334258 TRHRP34981 398 aaPredicted RBP12.78□□□□□ -0.36
SYNE3-201ENST00000334258 C17orf47Q8NEP4 570 aa12.78□□□□□ -0.36
SYNE3-201ENST00000334258 OR5AR1Q8NGP9 310 aa12.78□□□□□ -0.36
SYNE3-201ENST00000334258 CYB5D2Q8WUJ1 264 aa12.78□□□□□ -0.36
SYNE3-201ENST00000334258 TMEM255BQ8WV15 326 aa12.78□□□□□ -0.36
SYNE3-201ENST00000334258 ZNF578Q96N58 590 aaPredicted RBP12.78□□□□□ -0.36
SYNE3-201ENST00000334258 AMDHD1Q96NU7 426 aa12.78□□□□□ -0.36
SYNE3-201ENST00000334258 MCHR1Q99705 422 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms