RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 TP53P04637 393 aaPredicted RBP18.7■□□□□ 0.58
RIPPLY3-201ENST00000329553 DRD5P21918 477 aa18.7■□□□□ 0.58
RIPPLY3-201ENST00000329553 GADD45AP24522 165 aa18.7■□□□□ 0.58
RIPPLY3-201ENST00000329553 CD40LGP29965 261 aa18.7■□□□□ 0.58
RIPPLY3-201ENST00000329553 ZNF404Q494X3 552 aa18.7■□□□□ 0.58
RIPPLY3-201ENST00000329553 NKAIN1Q4KMZ8 207 aa18.7■□□□□ 0.58
RIPPLY3-201ENST00000329553 ZNF730Q6ZMV8 503 aa18.7■□□□□ 0.58
RIPPLY3-201ENST00000329553 BMP8AQ7Z5Y6 402 aa18.7■□□□□ 0.58
RIPPLY3-201ENST00000329553 RANBP3LQ86VV4 465 aaPredicted RBP18.7■□□□□ 0.58
RIPPLY3-201ENST00000329553 PLPP5Q8NEB5 264 aa18.7■□□□□ 0.58
RIPPLY3-201ENST00000329553 CNOT9Q92600 299 aaKnown RBP18.7■□□□□ 0.58
RIPPLY3-201ENST00000329553 ARSGQ96EG1 525 aa18.7■□□□□ 0.58
RIPPLY3-201ENST00000329553 LMF1Q96S06 567 aa18.7■□□□□ 0.58
RIPPLY3-201ENST00000329553 G6PC3Q9BUM1 346 aa18.7■□□□□ 0.58
RIPPLY3-201ENST00000329553 TGIF2Q9GZN2 237 aa18.7■□□□□ 0.58
RIPPLY3-201ENST00000329553 GPR83Q9NYM4 423 aa18.7■□□□□ 0.58
RIPPLY3-201ENST00000329553 ATP6V1G1O75348 118 aa18.7■□□□□ 0.58
RIPPLY3-201ENST00000329553 LIMK1P53667 647 aa18.7■□□□□ 0.58
RIPPLY3-201ENST00000329553 CLPPQ16740 277 aaPredicted RBP18.7■□□□□ 0.58
RIPPLY3-201ENST00000329553 AGAP7PQ5VUJ5 663 aa18.7■□□□□ 0.58
RIPPLY3-201ENST00000329553 CD300LDQ6UXZ3 194 aa18.7■□□□□ 0.58
RIPPLY3-201ENST00000329553 LSRQ86X29 649 aaPredicted RBP18.7■□□□□ 0.58
RIPPLY3-201ENST00000329553 PPP1R3BQ86XI6 285 aa18.7■□□□□ 0.58
RIPPLY3-201ENST00000329553 SLC46A1Q96NT5 459 aa18.7■□□□□ 0.58
RIPPLY3-201ENST00000329553 NUDT9Q9BW91 350 aa18.7■□□□□ 0.58
RIPPLY3-201ENST00000329553 SLC7A7Q9UM01 511 aa18.7■□□□□ 0.58
RIPPLY3-201ENST00000329553 A3GALT2U3KPV4 340 aa18.7■□□□□ 0.58
RIPPLY3-201ENST00000329553 IGLV3-12A0A075B6K2 115 aa18.69■□□□□ 0.58
RIPPLY3-201ENST00000329553 M0R129 80 aa18.69■□□□□ 0.58
RIPPLY3-201ENST00000329553 GDF9O60383 454 aa18.69■□□□□ 0.58
RIPPLY3-201ENST00000329553 ZGLP1P0C6A0 271 aa18.69■□□□□ 0.58
RIPPLY3-201ENST00000329553 PPICP45877 212 aa18.69■□□□□ 0.58
RIPPLY3-201ENST00000329553 COX10Q12887 443 aa18.69■□□□□ 0.58
RIPPLY3-201ENST00000329553 DNASE1L3Q13609 305 aa18.69■□□□□ 0.58
RIPPLY3-201ENST00000329553 IRF3Q14653 427 aa18.69■□□□□ 0.58
RIPPLY3-201ENST00000329553 ZNF141Q15928 474 aa18.69■□□□□ 0.58
RIPPLY3-201ENST00000329553 DBX2Q6ZNG2 339 aa18.69■□□□□ 0.58
RIPPLY3-201ENST00000329553 LANCL3Q6ZV70 420 aa18.69■□□□□ 0.58
RIPPLY3-201ENST00000329553 USP43Q70EL4 1123 aa18.69■□□□□ 0.58
RIPPLY3-201ENST00000329553 CADM3Q8N126 398 aa18.69■□□□□ 0.58
RIPPLY3-201ENST00000329553 C7orf57Q8NEG2 295 aa18.69■□□□□ 0.58
RIPPLY3-201ENST00000329553 OR4C3Q8NH37 302 aa18.69■□□□□ 0.58
RIPPLY3-201ENST00000329553 NXF2Q9GZY0 626 aaKnown RBP18.69■□□□□ 0.58
RIPPLY3-201ENST00000329553 WDR87Q6ZQQ6 2873 aa18.69■□□□□ 0.58
RIPPLY3-201ENST00000329553 H3BN98 237 aa18.69■□□□□ 0.58
RIPPLY3-201ENST00000329553 STSP08842 583 aa18.69■□□□□ 0.58
RIPPLY3-201ENST00000329553 ADORA3P0DMS8 318 aa18.69■□□□□ 0.58
RIPPLY3-201ENST00000329553 NUDT6P53370 316 aa18.69■□□□□ 0.58
RIPPLY3-201ENST00000329553 ATP12AP54707 1039 aa18.69■□□□□ 0.58
RIPPLY3-201ENST00000329553 OR1Q1Q15612 314 aa18.69■□□□□ 0.58
RIPPLY3-201ENST00000329553 DECR1Q16698 335 aa18.69■□□□□ 0.58
RIPPLY3-201ENST00000329553 FAAH2Q6GMR7 532 aa18.69■□□□□ 0.58
RIPPLY3-201ENST00000329553 ACOT11Q8WXI4 607 aaPredicted RBP18.69■□□□□ 0.58
RIPPLY3-201ENST00000329553 DAZLQ92904 295 aaKnown RBP18.69■□□□□ 0.58
RIPPLY3-201ENST00000329553 LOXL4Q96JB6 756 aa18.69■□□□□ 0.58
RIPPLY3-201ENST00000329553 CTRCQ99895 268 aa18.69■□□□□ 0.58
RIPPLY3-201ENST00000329553 NXF5Q9H1B4 397 aaKnown RBP18.69■□□□□ 0.58
RIPPLY3-201ENST00000329553 LDOC1O95751 146 aaPredicted RBP18.68■□□□□ 0.58
RIPPLY3-201ENST00000329553 CSTF2P33240 577 aaKnown RBP eCLIP18.68■□□□□ 0.58
RIPPLY3-201ENST00000329553 GRK5P34947 590 aa18.68■□□□□ 0.58
RIPPLY3-201ENST00000329553 GRK6P43250 576 aa18.68■□□□□ 0.58
RIPPLY3-201ENST00000329553 ZFP36L1Q07352 338 aaKnown RBP18.68■□□□□ 0.58
RIPPLY3-201ENST00000329553 ZNF385CQ66K41 422 aaPredicted RBP18.68■□□□□ 0.58
RIPPLY3-201ENST00000329553 TUBA3EQ6PEY2 450 aa18.68■□□□□ 0.58
RIPPLY3-201ENST00000329553 RRM2BQ7LG56 351 aa18.68■□□□□ 0.58
RIPPLY3-201ENST00000329553 TMEM255BQ8WV15 326 aa18.68■□□□□ 0.58
RIPPLY3-201ENST00000329553 PRSS27Q9BQR3 290 aa18.68■□□□□ 0.58
RIPPLY3-201ENST00000329553 INIPQ9NRY2 104 aa18.68■□□□□ 0.58
RIPPLY3-201ENST00000329553 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.68■□□□□ 0.58
RIPPLY3-201ENST00000329553 PAIP2BQ9ULR5 123 aaKnown RBP18.68■□□□□ 0.58
RIPPLY3-201ENST00000329553 R4GN57 208 aa18.68■□□□□ 0.58
RIPPLY3-201ENST00000329553 TRAPPC13A5PLN9 417 aa18.68■□□□□ 0.58
RIPPLY3-201ENST00000329553 EFCAB7A8K855 629 aa18.68■□□□□ 0.58
RIPPLY3-201ENST00000329553 ADAM11O75078 769 aa18.68■□□□□ 0.58
RIPPLY3-201ENST00000329553 ZNF883P0CG24 379 aa18.68■□□□□ 0.58
RIPPLY3-201ENST00000329553 OMPP47874 163 aa18.68■□□□□ 0.58
RIPPLY3-201ENST00000329553 CDC42P60953 191 aa18.68■□□□□ 0.58
RIPPLY3-201ENST00000329553 DCDP81605 110 aaKnown RBP18.68■□□□□ 0.58
RIPPLY3-201ENST00000329553 ST3GAL4Q11206 333 aa18.68■□□□□ 0.58
RIPPLY3-201ENST00000329553 FGFBP1Q14512 234 aa18.68■□□□□ 0.58
RIPPLY3-201ENST00000329553 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.68■□□□□ 0.58
RIPPLY3-201ENST00000329553 GRAMD2AQ8IUY3 354 aa18.68■□□□□ 0.58
RIPPLY3-201ENST00000329553 AMER2Q8N7J2 671 aa18.68■□□□□ 0.58
RIPPLY3-201ENST00000329553 OR14A16Q8NHC5 309 aa18.68■□□□□ 0.58
RIPPLY3-201ENST00000329553 GNPDA2Q8TDQ7 276 aa18.68■□□□□ 0.58
RIPPLY3-201ENST00000329553 ADIPOR1Q96A54 375 aa18.68■□□□□ 0.58
RIPPLY3-201ENST00000329553 EFHD2Q96C19 240 aaPredicted RBP18.68■□□□□ 0.58
RIPPLY3-201ENST00000329553 C11orf16Q9NQ32 467 aa18.68■□□□□ 0.58
RIPPLY3-201ENST00000329553 IMPAD1Q9NX62 359 aa18.68■□□□□ 0.58
RIPPLY3-201ENST00000329553 CFL2Q9Y281 166 aa18.68■□□□□ 0.58
RIPPLY3-201ENST00000329553 PCDHGA3Q9Y5H0 932 aa18.68■□□□□ 0.58
RIPPLY3-201ENST00000329553 TAF4O00268 1085 aa18.67■□□□□ 0.58
RIPPLY3-201ENST00000329553 FMO6PO60774 539 aa18.67■□□□□ 0.58
RIPPLY3-201ENST00000329553 PTHP01270 115 aa18.67■□□□□ 0.58
RIPPLY3-201ENST00000329553 IFNGR2P38484 337 aa18.67■□□□□ 0.58
RIPPLY3-201ENST00000329553 ALDH6A1Q02252 535 aaKnown RBP18.67■□□□□ 0.58
RIPPLY3-201ENST00000329553 CD300CQ08708 224 aa18.67■□□□□ 0.58
RIPPLY3-201ENST00000329553 STX19Q8N4C7 294 aa18.67■□□□□ 0.58
RIPPLY3-201ENST00000329553 CRELD1Q96HD1 420 aa18.67■□□□□ 0.58
RIPPLY3-201ENST00000329553 POLR2J2Q9GZM3 115 aaKnown RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms