RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 SETD9Q8NE22 299 aa15.09■□□□□ 0.01
PDLIM1-201ENST00000329399 OR1N1Q8NGS0 311 aa15.09■□□□□ 0.01
PDLIM1-201ENST00000329399 CPT1CQ8TCG5 803 aa15.09■□□□□ 0.01
PDLIM1-201ENST00000329399 CYGBQ8WWM9 190 aa15.09■□□□□ 0.01
PDLIM1-201ENST00000329399 SENP5Q96HI0 755 aaPredicted RBP15.09■□□□□ 0.01
PDLIM1-201ENST00000329399 PRRC1Q96M27 445 aa15.09■□□□□ 0.01
PDLIM1-201ENST00000329399 ZNF696Q9H7X3 374 aa15.09■□□□□ 0.01
PDLIM1-201ENST00000329399 ANKRA2Q9H9E1 313 aa15.09■□□□□ 0.01
PDLIM1-201ENST00000329399 ASF1BQ9NVP2 202 aa15.09■□□□□ 0.01
PDLIM1-201ENST00000329399 PPIEQ9UNP9 301 aaKnown RBP15.09■□□□□ 0.01
PDLIM1-201ENST00000329399 POFUT2Q9Y2G5 429 aa15.09■□□□□ 0.01
PDLIM1-201ENST00000329399 U3KQV3 271 aa15.09■□□□□ 0.01
PDLIM1-201ENST00000329399 POLEQ07864 2286 aa15.09■□□□□ 0.01
PDLIM1-201ENST00000329399 PRAMEF25A6NGN4 478 aa15.08■□□□□ 0.01
PDLIM1-201ENST00000329399 FAAHO00519 579 aa15.08■□□□□ 0.01
PDLIM1-201ENST00000329399 CCNB2O95067 398 aa15.08■□□□□ 0.01
PDLIM1-201ENST00000329399 SNAP29O95721 258 aa15.08■□□□□ 0.01
PDLIM1-201ENST00000329399 NID1P14543 1247 aa15.08■□□□□ 0.01
PDLIM1-201ENST00000329399 DRD5P21918 477 aa15.08■□□□□ 0.01
PDLIM1-201ENST00000329399 CD96P40200 585 aa15.08■□□□□ 0.01
PDLIM1-201ENST00000329399 PPICP45877 212 aa15.08■□□□□ 0.01
PDLIM1-201ENST00000329399 IST1P53990 364 aa15.08■□□□□ 0.01
PDLIM1-201ENST00000329399 CDH12P55289 794 aa15.08■□□□□ 0.01
PDLIM1-201ENST00000329399 ARG2P78540 354 aa15.08■□□□□ 0.01
PDLIM1-201ENST00000329399 PSG6Q00889 435 aa15.08■□□□□ 0.01
PDLIM1-201ENST00000329399 KEAP1Q14145 624 aa15.08■□□□□ 0.01
PDLIM1-201ENST00000329399 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.08■□□□□ 0.01
PDLIM1-201ENST00000329399 ZNF227Q86WZ6 799 aa15.08■□□□□ 0.01
PDLIM1-201ENST00000329399 ATG16L2Q8NAA4 619 aa15.08■□□□□ 0.01
PDLIM1-201ENST00000329399 C17orf47Q8NEP4 570 aa15.08■□□□□ 0.01
PDLIM1-201ENST00000329399 B3GNT7Q8NFL0 401 aa15.08■□□□□ 0.01
PDLIM1-201ENST00000329399 SIGLEC12Q96PQ1 595 aa15.08■□□□□ 0.01
PDLIM1-201ENST00000329399 FNDC11Q9BVV2 318 aa15.08■□□□□ 0.01
PDLIM1-201ENST00000329399 HES7Q9BYE0 225 aa15.08■□□□□ 0.01
PDLIM1-201ENST00000329399 NMNAT1Q9HAN9 279 aaPredicted RBP15.08■□□□□ 0.01
PDLIM1-201ENST00000329399 SMURF2Q9HAU4 748 aa15.08■□□□□ 0.01
PDLIM1-201ENST00000329399 KRT84Q9NSB2 600 aa15.08■□□□□ 0.01
PDLIM1-201ENST00000329399 FAM118AQ9NWS6 357 aa15.08■□□□□ 0.01
PDLIM1-201ENST00000329399 VNN3Q9NY84 501 aa15.08■□□□□ 0.01
PDLIM1-201ENST00000329399 COPS7AQ9UBW8 275 aa15.08■□□□□ 0.01
PDLIM1-201ENST00000329399 ERVK-19Q9WJR5 959 aa15.08■□□□□ 0.01
PDLIM1-201ENST00000329399 ZNF443Q9Y2A4 671 aaPredicted RBP15.08■□□□□ 0.01
PDLIM1-201ENST00000329399 TESMINQ9Y4I5 508 aa15.08■□□□□ 0.01
PDLIM1-201ENST00000329399 TRBV11-1A0A0K0K1C0 115 aa15.08■□□□□ 0
PDLIM1-201ENST00000329399 FCMRO60667 390 aa15.08■□□□□ 0
PDLIM1-201ENST00000329399 UGT2B17O75795 530 aa15.08■□□□□ 0
PDLIM1-201ENST00000329399 DIRAS1O95057 198 aa15.08■□□□□ 0
PDLIM1-201ENST00000329399 KCNK2O95069 426 aa15.08■□□□□ 0
PDLIM1-201ENST00000329399 WISP1O95388 367 aa15.08■□□□□ 0
PDLIM1-201ENST00000329399 PIGAP37287 484 aa15.08■□□□□ 0
PDLIM1-201ENST00000329399 IFNGR2P38484 337 aa15.08■□□□□ 0
PDLIM1-201ENST00000329399 DCST1Q5T197 706 aa15.08■□□□□ 0
PDLIM1-201ENST00000329399 ABHD17BQ5VST6 288 aa15.08■□□□□ 0
PDLIM1-201ENST00000329399 SPINK14Q6IE38 97 aa15.08■□□□□ 0
PDLIM1-201ENST00000329399 RPS19BP1Q86WX3 136 aaKnown RBP15.08■□□□□ 0
PDLIM1-201ENST00000329399 GRAMD2AQ8IUY3 354 aa15.08■□□□□ 0
PDLIM1-201ENST00000329399 PARP8Q8N3A8 854 aa15.08■□□□□ 0
PDLIM1-201ENST00000329399 OR10G2Q8NGC3 310 aa15.08■□□□□ 0
PDLIM1-201ENST00000329399 C16orf52Q8NHV5 167 aa15.08■□□□□ 0
PDLIM1-201ENST00000329399 TM9SF4Q92544 642 aa15.08■□□□□ 0
PDLIM1-201ENST00000329399 ALPK1Q96QP1 1244 aa15.08■□□□□ 0
PDLIM1-201ENST00000329399 CNPPD1Q9BV87 410 aa15.08■□□□□ 0
PDLIM1-201ENST00000329399 TOR3AQ9H497 397 aa15.08■□□□□ 0
PDLIM1-201ENST00000329399 TMEFF2Q9UIK5 374 aaPredicted RBP15.08■□□□□ 0
PDLIM1-201ENST00000329399 MGAT4BQ9UQ53 548 aa15.08■□□□□ 0
PDLIM1-201ENST00000329399 GPR55Q9Y2T6 319 aaPredicted RBP15.08■□□□□ 0
PDLIM1-201ENST00000329399 HIVEP3Q5T1R4 2406 aa15.08■□□□□ 0
PDLIM1-201ENST00000329399 ESPL1Q14674 2120 aa15.07■□□□□ 0
PDLIM1-201ENST00000329399 HECTD1Q9ULT8 2610 aa15.07■□□□□ 0
PDLIM1-201ENST00000329399 AP3D1O14617 1153 aa15.07■□□□□ 0
PDLIM1-201ENST00000329399 ZNF354AO60765 605 aaPredicted RBP15.07■□□□□ 0
PDLIM1-201ENST00000329399 IGKV3-11P04433 115 aa15.07■□□□□ 0
PDLIM1-201ENST00000329399 ENDOUP21128 410 aaKnown RBP15.07■□□□□ 0
PDLIM1-201ENST00000329399 SSTR4P31391 388 aa15.07■□□□□ 0
PDLIM1-201ENST00000329399 RYKP34925 604 aa15.07■□□□□ 0
PDLIM1-201ENST00000329399 UQCRFS1P47985 274 aa15.07■□□□□ 0
PDLIM1-201ENST00000329399 DAPP51397 102 aa15.07■□□□□ 0
PDLIM1-201ENST00000329399 SLC37A1P57057 533 aa15.07■□□□□ 0
PDLIM1-201ENST00000329399 MLF1P58340 268 aa15.07■□□□□ 0
PDLIM1-201ENST00000329399 ST3GAL3Q11203 375 aa15.07■□□□□ 0
PDLIM1-201ENST00000329399 COX10Q12887 443 aa15.07■□□□□ 0
PDLIM1-201ENST00000329399 TUBA3CQ13748 450 aa15.07■□□□□ 0
PDLIM1-201ENST00000329399 ZNF169Q14929 603 aaPredicted RBP15.07■□□□□ 0
PDLIM1-201ENST00000329399 ZNF141Q15928 474 aa15.07■□□□□ 0
PDLIM1-201ENST00000329399 DECR1Q16698 335 aa15.07■□□□□ 0
PDLIM1-201ENST00000329399 TUBA3EQ6PEY2 450 aa15.07■□□□□ 0
PDLIM1-201ENST00000329399 RANBP3LQ86VV4 465 aaPredicted RBP15.07■□□□□ 0
PDLIM1-201ENST00000329399 OFCC1Q8IZS5 231 aa15.07■□□□□ 0
PDLIM1-201ENST00000329399 C8orf59Q8N0T1 100 aaPredicted RBP15.07■□□□□ 0
PDLIM1-201ENST00000329399 ZNF721Q8TF20 911 aa15.07■□□□□ 0
PDLIM1-201ENST00000329399 TAAR6Q96RI8 345 aa15.07■□□□□ 0
PDLIM1-201ENST00000329399 APOL4Q9BPW4 351 aa15.07■□□□□ 0
PDLIM1-201ENST00000329399 OR8D2Q9GZM6 311 aa15.07■□□□□ 0
PDLIM1-201ENST00000329399 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.07■□□□□ 0
PDLIM1-201ENST00000329399 UBAP1Q9NZ09 502 aa15.07■□□□□ 0
PDLIM1-201ENST00000329399 MKLN1Q9UL63 735 aa15.07■□□□□ 0
PDLIM1-201ENST00000329399 CBLCQ9ULV8 474 aa15.07■□□□□ 0
PDLIM1-201ENST00000329399 MYRFQ9Y2G1 1151 aa15.07■□□□□ 0
PDLIM1-201ENST00000329399 SETXQ7Z333 2677 aaKnown RBP15.06■□□□□ 0
PDLIM1-201ENST00000329399 LOC100130705A0A1B0GUX0 176 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms