RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 SLC37A3Q8NCC5 494 aa13.04□□□□□ -0.32
ATP2C1-201ENST00000328560 GALNT6Q8NCL4 622 aa13.04□□□□□ -0.32
ATP2C1-201ENST00000328560 OR52N1Q8NH53 320 aa13.04□□□□□ -0.32
ATP2C1-201ENST00000328560 DNAJA4Q8WW22 397 aaPredicted RBP13.04□□□□□ -0.32
ATP2C1-201ENST00000328560 SLC22A18Q96BI1 424 aa13.04□□□□□ -0.32
ATP2C1-201ENST00000328560 PTCHD1Q96NR3 888 aa13.04□□□□□ -0.32
ATP2C1-201ENST00000328560 CDCA3Q99618 268 aaPredicted RBP13.04□□□□□ -0.32
ATP2C1-201ENST00000328560 PBX4Q9BYU1 374 aa13.04□□□□□ -0.32
ATP2C1-201ENST00000328560 KIR3DX1Q9H7L2 352 aa13.04□□□□□ -0.32
ATP2C1-201ENST00000328560 KCMF1Q9P0J7 381 aa13.04□□□□□ -0.32
ATP2C1-201ENST00000328560 ADAM30Q9UKF2 790 aa13.04□□□□□ -0.32
ATP2C1-201ENST00000328560 KIF26AQ9ULI4 1882 aaPredicted RBP13.04□□□□□ -0.32
ATP2C1-201ENST00000328560 FGF17O60258 216 aa13.04□□□□□ -0.32
ATP2C1-201ENST00000328560 HCN1O60741 890 aa13.04□□□□□ -0.32
ATP2C1-201ENST00000328560 KLF8O95600 359 aaPredicted RBP13.04□□□□□ -0.32
ATP2C1-201ENST00000328560 HCCSP53701 268 aa13.04□□□□□ -0.32
ATP2C1-201ENST00000328560 SRSF5Q13243 272 aaKnown RBP13.04□□□□□ -0.32
ATP2C1-201ENST00000328560 ARHGAP11BQ3KRB8 267 aa13.04□□□□□ -0.32
ATP2C1-201ENST00000328560 EIPR1Q53HC9 387 aa13.04□□□□□ -0.32
ATP2C1-201ENST00000328560 ZNF542PQ5EBM4 170 aa13.04□□□□□ -0.32
ATP2C1-201ENST00000328560 TMEM196Q5HYL7 178 aa13.04□□□□□ -0.32
ATP2C1-201ENST00000328560 HEPHL1Q6MZM0 1159 aa13.04□□□□□ -0.32
ATP2C1-201ENST00000328560 NIPAL3Q6P499 406 aa13.04□□□□□ -0.32
ATP2C1-201ENST00000328560 CEACAM19Q7Z692 300 aa13.04□□□□□ -0.32
ATP2C1-201ENST00000328560 OR5W2Q8NH69 310 aa13.04□□□□□ -0.32
ATP2C1-201ENST00000328560 BPIFA2Q96DR5 249 aa13.04□□□□□ -0.32
ATP2C1-201ENST00000328560 PRSS27Q9BQR3 290 aa13.04□□□□□ -0.32
ATP2C1-201ENST00000328560 ZNF649Q9BS31 505 aa13.04□□□□□ -0.32
ATP2C1-201ENST00000328560 KCNE5Q9UJ90 142 aa13.04□□□□□ -0.32
ATP2C1-201ENST00000328560 EXOGQ9Y2C4 368 aaKnown RBP13.04□□□□□ -0.32
ATP2C1-201ENST00000328560 URADA6NGE7 173 aa13.03□□□□□ -0.32
ATP2C1-201ENST00000328560 PPP1R3DO95685 299 aa13.03□□□□□ -0.32
ATP2C1-201ENST00000328560 SYT9Q86SS6 491 aa13.03□□□□□ -0.32
ATP2C1-201ENST00000328560 ZNF619Q8N2I2 560 aa13.03□□□□□ -0.32
ATP2C1-201ENST00000328560 TMEM52Q8NDY8 209 aa13.03□□□□□ -0.32
ATP2C1-201ENST00000328560 OR13C5Q8NGS8 318 aa13.03□□□□□ -0.32
ATP2C1-201ENST00000328560 RERGQ96A58 199 aaPredicted RBP13.03□□□□□ -0.32
ATP2C1-201ENST00000328560 UPRTQ96BW1 309 aa13.03□□□□□ -0.32
ATP2C1-201ENST00000328560 KCNN2Q9H2S1 579 aa13.03□□□□□ -0.32
ATP2C1-201ENST00000328560 GALNT9Q9HCQ5 603 aa13.03□□□□□ -0.32
ATP2C1-201ENST00000328560 CLDND1Q9NY35 253 aa13.03□□□□□ -0.32
ATP2C1-201ENST00000328560 RASD1Q9Y272 281 aa13.03□□□□□ -0.32
ATP2C1-201ENST00000328560 A0A1W2PRG6 482 aa13.03□□□□□ -0.32
ATP2C1-201ENST00000328560 RGS13O14921 159 aa13.03□□□□□ -0.32
ATP2C1-201ENST00000328560 KLF4O43474 513 aa13.03□□□□□ -0.32
ATP2C1-201ENST00000328560 AGR2O95994 175 aa13.03□□□□□ -0.32
ATP2C1-201ENST00000328560 IGHA1P01876 353 aa13.03□□□□□ -0.32
ATP2C1-201ENST00000328560 UGT2B7P16662 529 aa13.03□□□□□ -0.32
ATP2C1-201ENST00000328560 PYCR1P32322 319 aa13.03□□□□□ -0.32
ATP2C1-201ENST00000328560 BMP8BP34820 402 aa13.03□□□□□ -0.32
ATP2C1-201ENST00000328560 TSFMP43897 325 aaKnown RBP13.03□□□□□ -0.32
ATP2C1-201ENST00000328560 FXYD6P3P58550 94 aa13.03□□□□□ -0.32
ATP2C1-201ENST00000328560 ADAM15Q13444 863 aa13.03□□□□□ -0.32
ATP2C1-201ENST00000328560 Q5BKY6 102 aa13.03□□□□□ -0.32
ATP2C1-201ENST00000328560 BMP8AQ7Z5Y6 402 aa13.03□□□□□ -0.32
ATP2C1-201ENST00000328560 ZAR1Q86SH2 424 aa13.03□□□□□ -0.32
ATP2C1-201ENST00000328560 GID4Q8IVV7 300 aa13.03□□□□□ -0.32
ATP2C1-201ENST00000328560 OR2L13Q8N349 312 aa13.03□□□□□ -0.32
ATP2C1-201ENST00000328560 CADM2Q8N3J6 435 aa13.03□□□□□ -0.32
ATP2C1-201ENST00000328560 OR4C6Q8NH72 309 aa13.03□□□□□ -0.32
ATP2C1-201ENST00000328560 KIAA1143Q96AT1 154 aaPredicted RBP13.03□□□□□ -0.32
ATP2C1-201ENST00000328560 DACT3Q96B18 629 aaPredicted RBP13.03□□□□□ -0.32
ATP2C1-201ENST00000328560 C4orf36Q96KX1 117 aa13.03□□□□□ -0.32
ATP2C1-201ENST00000328560 OR2A5Q96R48 311 aa13.03□□□□□ -0.32
ATP2C1-201ENST00000328560 SERINC2Q96SA4 455 aa13.03□□□□□ -0.32
ATP2C1-201ENST00000328560 TMEM43Q9BTV4 400 aa13.03□□□□□ -0.32
ATP2C1-201ENST00000328560 NKX2-4Q9H2Z4 354 aa13.03□□□□□ -0.32
ATP2C1-201ENST00000328560 TRIM36Q9NQ86 728 aa13.03□□□□□ -0.32
ATP2C1-201ENST00000328560 TRPV5Q9NQA5 729 aa13.03□□□□□ -0.32
ATP2C1-201ENST00000328560 ENAMQ9NRM1 1142 aa13.03□□□□□ -0.32
ATP2C1-201ENST00000328560 MED17Q9NVC6 651 aa13.03□□□□□ -0.32
ATP2C1-201ENST00000328560 MCUBQ9NWR8 336 aa13.03□□□□□ -0.32
ATP2C1-201ENST00000328560 ZNF10P21506 573 aaPredicted RBP13.03□□□□□ -0.32
ATP2C1-201ENST00000328560 OR12D2P58182 307 aa13.03□□□□□ -0.32
ATP2C1-201ENST00000328560 EEF1A1P68104 462 aaKnown RBP13.03□□□□□ -0.32
ATP2C1-201ENST00000328560 FOXK2Q01167 660 aa13.03□□□□□ -0.32
ATP2C1-201ENST00000328560 TFF2Q03403 129 aa13.03□□□□□ -0.32
ATP2C1-201ENST00000328560 CRMP1Q14194 572 aa13.03□□□□□ -0.32
ATP2C1-201ENST00000328560 NNATQ16517 81 aa13.03□□□□□ -0.32
ATP2C1-201ENST00000328560 NANOGNBQ7Z5D8 188 aa13.03□□□□□ -0.32
ATP2C1-201ENST00000328560 DNAJC5GQ8N7S2 189 aa13.03□□□□□ -0.32
ATP2C1-201ENST00000328560 PTP4A1Q93096 173 aa13.03□□□□□ -0.32
ATP2C1-201ENST00000328560 PIGUQ9H490 435 aa13.03□□□□□ -0.32
ATP2C1-201ENST00000328560 MED31Q9Y3C7 131 aa13.03□□□□□ -0.32
ATP2C1-201ENST00000328560 SPACA6W5XKT8 324 aa13.03□□□□□ -0.32
ATP2C1-201ENST00000328560 H0YGG7 62 aa13.02□□□□□ -0.32
ATP2C1-201ENST00000328560 EEF1E1O43324 174 aaKnown RBP13.02□□□□□ -0.32
ATP2C1-201ENST00000328560 PLRG1O43660 514 aaKnown RBP13.02□□□□□ -0.32
ATP2C1-201ENST00000328560 ALAS2P22557 587 aa13.02□□□□□ -0.32
ATP2C1-201ENST00000328560 TNFRSF4P43489 277 aa13.02□□□□□ -0.32
ATP2C1-201ENST00000328560 ARF3P61204 181 aaPredicted RBP13.02□□□□□ -0.32
ATP2C1-201ENST00000328560 DUSP8Q13202 625 aa13.02□□□□□ -0.32
ATP2C1-201ENST00000328560 GPR18Q14330 331 aa13.02□□□□□ -0.32
ATP2C1-201ENST00000328560 OR4M1Q8NGD0 313 aa13.02□□□□□ -0.32
ATP2C1-201ENST00000328560 CNOT9Q92600 299 aaKnown RBP13.02□□□□□ -0.32
ATP2C1-201ENST00000328560 PHF21AQ96BD5 680 aa13.02□□□□□ -0.32
ATP2C1-201ENST00000328560 ASB6Q9NWX5 421 aa13.02□□□□□ -0.32
ATP2C1-201ENST00000328560 YBX2Q9Y2T7 364 aaKnown RBP13.02□□□□□ -0.32
ATP2C1-201ENST00000328560 SZT2Q5T011 3432 aa13.02□□□□□ -0.33
ATP2C1-201ENST00000328560 ARHGEF17Q96PE2 2063 aaPredicted RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms