RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 SLBPQ14493 270 aaKnown RBP eCLIP5.95□□□□□ -1.46
CSTF3-201ENST00000323959 VPS26BQ4G0F5 336 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 KHDRBS2Q5VWX1 349 aaKnown RBP5.95□□□□□ -1.46
CSTF3-201ENST00000323959 RNF44Q7L0R7 432 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 MSRB3Q8IXL7 192 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 ZNF525Q8N782 197 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 TRPV3Q8NET8 790 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 OR9I1Q8NGQ6 314 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 LILRB1Q8NHL6 650 aaPredicted RBP5.95□□□□□ -1.46
CSTF3-201ENST00000323959 LZICQ8WZA0 190 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 WNT2BQ93097 391 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 NCLNQ969V3 563 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 APIPQ96GX9 242 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 C10orf90Q96M02 699 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 PRPF18Q99633 342 aaKnown RBP5.95□□□□□ -1.46
CSTF3-201ENST00000323959 YIPF2Q9BWQ6 316 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 VCXQ9H320 206 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 REEP4Q9H6H4 257 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 KAT8Q9H7Z6 458 aaKnown RBP5.95□□□□□ -1.46
CSTF3-201ENST00000323959 DLGAP4Q9Y2H0 992 aa5.95□□□□□ -1.46
CSTF3-201ENST00000323959 DOCK7Q96N67 2140 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 A0A0A6YYD5 115 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 IGHV3-20A0A0C4DH32 117 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 IGKV1-8A0A0C4DH67 115 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 MAGEB17A8MXT2 336 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 G3V4G9 280 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 H7C417 338 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 MED26O95402 600 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 CD8AP01732 235 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 SEMG1P04279 462 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 TBXA2RP21731 343 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 CMPK1P30085 196 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 PEBP1P30086 187 aaKnown RBP5.94□□□□□ -1.46
CSTF3-201ENST00000323959 SSR4P51571 173 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 AGFG1P52594 562 aaKnown RBP5.94□□□□□ -1.46
CSTF3-201ENST00000323959 CHN2P52757 468 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 SH3BGRP55822 239 aaPredicted RBP5.94□□□□□ -1.46
CSTF3-201ENST00000323959 MS4A2Q01362 244 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 ACSM2AQ08AH3 577 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 RBBP4Q09028 425 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 NFYCQ13952 458 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 CPSF6Q16630 551 aaKnown RBP eCLIP5.94□□□□□ -1.463e-6■■■□□ 16.2
CSTF3-201ENST00000323959 PRTGQ2VWP7 1150 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 INTS11Q5TA45 600 aaKnown RBP5.94□□□□□ -1.46
CSTF3-201ENST00000323959 ACSM2BQ68CK6 577 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 ASPHD2Q6ICH7 369 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 LRRC74BQ6ZQY2 392 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 GLCCI1Q86VQ1 547 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 TMEM132CQ8N3T6 1108 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 ZNF540Q8NDQ6 660 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 OR2L3Q8NG85 312 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 TMEM38AQ9H6F2 299 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 THUMPD1Q9NXG2 353 aaKnown RBP5.94□□□□□ -1.46
CSTF3-201ENST00000323959 NTMQ9P121 344 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 ZNF232Q9UNY5 417 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 FIS1Q9Y3D6 152 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 SNX8Q9Y5X2 465 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 HEATR5BQ9P2D3 2071 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 THBDP07204 575 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 S100A3P33764 101 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 PTDSS1P48651 473 aaKnown RBP5.94□□□□□ -1.46
CSTF3-201ENST00000323959 GSK3BP49841 420 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 SLC7A2P52569 658 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 EFNA4P52798 201 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 PHC1P78364 1004 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 HYAL2Q12891 473 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 FADDQ13158 208 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 RCN1Q15293 331 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 SFT2D3Q587I9 215 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 NHSL2Q5HYW2 709 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 PRAMEF8Q5VWM4 474 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 PRAMEF7Q5VXH5 474 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 TMEM64Q6YI46 380 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 RTL4Q6ZR62 310 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 LANCL3Q6ZV70 420 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 MDGA2Q7Z553 956 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 GPR180Q86V85 440 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 DHFR2Q86XF0 187 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 PQLC1Q8N2U9 271 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 PLPP5Q8NEB5 264 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 SKA2Q8WVK7 121 aaPredicted RBP5.94□□□□□ -1.46
CSTF3-201ENST00000323959 DDB2Q92466 427 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 RGMAQ96B86 450 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 MOAP1Q96BY2 351 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 CLPTM1LQ96KA5 538 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 ZNF583Q96ND8 569 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 TBCDQ9BTW9 1192 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 NPLQ9BXD5 320 aaPredicted RBP5.94□□□□□ -1.46
CSTF3-201ENST00000323959 ESM1Q9NQ30 184 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 RYDENQ9NUL5 291 aaKnown RBP5.94□□□□□ -1.46
CSTF3-201ENST00000323959 LYARQ9NX58 379 aaKnown RBP5.94□□□□□ -1.46
CSTF3-201ENST00000323959 EXO1Q9UQ84 846 aaKnown RBP5.94□□□□□ -1.46
CSTF3-201ENST00000323959 SH2B3Q9UQQ2 575 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 PLXNB1O43157 2135 aa5.94□□□□□ -1.46
CSTF3-201ENST00000323959 SYNDIG1LA6NDD5 238 aa5.93□□□□□ -1.46
CSTF3-201ENST00000323959 GUCY1B2O75343 617 aa5.93□□□□□ -1.46
CSTF3-201ENST00000323959 KRT36O76013 467 aa5.93□□□□□ -1.46
CSTF3-201ENST00000323959 ETHE1O95571 254 aa5.93□□□□□ -1.46
CSTF3-201ENST00000323959 STAMBPO95630 424 aa5.93□□□□□ -1.46
CSTF3-201ENST00000323959 F13BP05160 661 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms