RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 TRAV27A0A087WT01 109 aa11.9□□□□□ -0.5
DNMT3A-202ENST00000321117 A0A0A6YYJ9 748 aa11.9□□□□□ -0.5
DNMT3A-202ENST00000321117 CLDN4O14493 209 aa11.9□□□□□ -0.5
DNMT3A-202ENST00000321117 KIAA0355O15063 1070 aa11.9□□□□□ -0.5
DNMT3A-202ENST00000321117 RENP00797 406 aa11.9□□□□□ -0.5
DNMT3A-202ENST00000321117 CHRM4P08173 479 aa11.9□□□□□ -0.5
DNMT3A-202ENST00000321117 GTF2F2P13984 249 aa11.9□□□□□ -0.5
DNMT3A-202ENST00000321117 MAP3K8P41279 467 aa11.9□□□□□ -0.5
DNMT3A-202ENST00000321117 FNTBP49356 437 aa11.9□□□□□ -0.5
DNMT3A-202ENST00000321117 ZNF234Q14588 700 aa11.9□□□□□ -0.5
DNMT3A-202ENST00000321117 ZNF765Q7L2R6 523 aa11.9□□□□□ -0.5
DNMT3A-202ENST00000321117 GDF7Q7Z4P5 450 aa11.9□□□□□ -0.5
DNMT3A-202ENST00000321117 CHST4Q8NCG5 386 aa11.9□□□□□ -0.5
DNMT3A-202ENST00000321117 THEM6Q8WUY1 208 aa11.9□□□□□ -0.5
DNMT3A-202ENST00000321117 FFAR1O14842 300 aa11.9□□□□□ -0.5
DNMT3A-202ENST00000321117 GMFGO60234 142 aa11.9□□□□□ -0.5
DNMT3A-202ENST00000321117 CSN2P05814 226 aa11.9□□□□□ -0.5
DNMT3A-202ENST00000321117 AHCYP23526 432 aa11.9□□□□□ -0.5
DNMT3A-202ENST00000321117 GDNFP39905 211 aa11.9□□□□□ -0.5
DNMT3A-202ENST00000321117 ILF3Q12906 894 aaKnown RBP eCLIP11.9□□□□□ -0.5
DNMT3A-202ENST00000321117 CDKN3Q16667 212 aa11.9□□□□□ -0.5
DNMT3A-202ENST00000321117 AKIRIN2Q53H80 203 aa11.9□□□□□ -0.5
DNMT3A-202ENST00000321117 OLFML2AQ68BL7 652 aa11.9□□□□□ -0.5
DNMT3A-202ENST00000321117 C18orf63Q68DL7 685 aa11.9□□□□□ -0.5
DNMT3A-202ENST00000321117 SPERTQ8NA61 448 aa11.9□□□□□ -0.5
DNMT3A-202ENST00000321117 POMGNT2Q8NAT1 580 aa11.9□□□□□ -0.5
DNMT3A-202ENST00000321117 ZNF680Q8NEM1 530 aa11.9□□□□□ -0.5
DNMT3A-202ENST00000321117 SLC25A18Q9H1K4 315 aa11.9□□□□□ -0.5
DNMT3A-202ENST00000321117 RSPH9Q9H1X1 276 aaPredicted RBP11.9□□□□□ -0.5
DNMT3A-202ENST00000321117 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.9□□□□□ -0.5
DNMT3A-202ENST00000321117 REV1Q9UBZ9 1251 aa11.9□□□□□ -0.5
DNMT3A-202ENST00000321117 MLXQ9UH92 298 aa11.9□□□□□ -0.5
DNMT3A-202ENST00000321117 ATG4BQ9Y4P1 393 aa11.9□□□□□ -0.5
DNMT3A-202ENST00000321117 NYNRINQ9P2P1 1898 aaKnown RBP11.9□□□□□ -0.5
DNMT3A-202ENST00000321117 WASH3PC4AMC7 463 aa11.9□□□□□ -0.5
DNMT3A-202ENST00000321117 SMAD9O15198 467 aaKnown RBP11.9□□□□□ -0.5
DNMT3A-202ENST00000321117 ATP5A1P25705 553 aaKnown RBP11.9□□□□□ -0.5
DNMT3A-202ENST00000321117 BSGP35613 385 aa11.9□□□□□ -0.5
DNMT3A-202ENST00000321117 ADH7P40394 386 aa11.9□□□□□ -0.5
DNMT3A-202ENST00000321117 DNASE1L1P49184 302 aa11.9□□□□□ -0.5
DNMT3A-202ENST00000321117 CDK3Q00526 305 aa11.9□□□□□ -0.5
DNMT3A-202ENST00000321117 PDZD9Q8IXQ8 264 aa11.9□□□□□ -0.5
DNMT3A-202ENST00000321117 OR13C2Q8NGS9 318 aa11.9□□□□□ -0.5
DNMT3A-202ENST00000321117 NSMAFQ92636 917 aa11.9□□□□□ -0.5
DNMT3A-202ENST00000321117 NKD1Q969G9 470 aa11.9□□□□□ -0.5
DNMT3A-202ENST00000321117 SGTBQ96EQ0 304 aa11.9□□□□□ -0.5
DNMT3A-202ENST00000321117 KXD1Q9BQD3 176 aa11.9□□□□□ -0.5
DNMT3A-202ENST00000321117 ZNF559Q9BR84 538 aa11.9□□□□□ -0.5
DNMT3A-202ENST00000321117 TAPBPLQ9BX59 468 aa11.9□□□□□ -0.5
DNMT3A-202ENST00000321117 GPATCH2Q9NW75 528 aa11.9□□□□□ -0.5
DNMT3A-202ENST00000321117 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.89□□□□□ -0.51
DNMT3A-202ENST00000321117 SGK494L7N484 410 aa11.89□□□□□ -0.51
DNMT3A-202ENST00000321117 PIP5K1CO60331 668 aa11.89□□□□□ -0.51
DNMT3A-202ENST00000321117 SLC2A10O95528 541 aa11.89□□□□□ -0.51
DNMT3A-202ENST00000321117 PSMB10P40306 273 aa11.89□□□□□ -0.51
DNMT3A-202ENST00000321117 ZNF550Q7Z398 422 aa11.89□□□□□ -0.51
DNMT3A-202ENST00000321117 TECPR1Q7Z6L1 1165 aa11.89□□□□□ -0.51
DNMT3A-202ENST00000321117 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.89□□□□□ -0.51
DNMT3A-202ENST00000321117 SDR9C7Q8NEX9 313 aa11.89□□□□□ -0.51
DNMT3A-202ENST00000321117 OR8S1Q8NH09 359 aa11.89□□□□□ -0.51
DNMT3A-202ENST00000321117 ANGPTL6Q8NI99 470 aa11.89□□□□□ -0.51
DNMT3A-202ENST00000321117 PPA2Q9H2U2 334 aa11.89□□□□□ -0.51
DNMT3A-202ENST00000321117 BCL2L10Q9HD36 194 aa11.89□□□□□ -0.51
DNMT3A-202ENST00000321117 KCNN3Q9UGI6 736 aa11.89□□□□□ -0.51
DNMT3A-202ENST00000321117 KCND3Q9UK17 655 aa11.89□□□□□ -0.51
DNMT3A-202ENST00000321117 MCIDASD6RGH6 385 aa11.89□□□□□ -0.51
DNMT3A-202ENST00000321117 GCM2O75603 506 aaPredicted RBP11.89□□□□□ -0.51
DNMT3A-202ENST00000321117 RAF1P04049 648 aa11.89□□□□□ -0.51
DNMT3A-202ENST00000321117 LIMS3P0CW19 117 aa11.89□□□□□ -0.51
DNMT3A-202ENST00000321117 LIMS4P0CW20 117 aa11.89□□□□□ -0.51
DNMT3A-202ENST00000321117 PSMB1P20618 241 aaKnown RBP11.89□□□□□ -0.51
DNMT3A-202ENST00000321117 PRKAR1BP31321 381 aa11.89□□□□□ -0.51
DNMT3A-202ENST00000321117 CSNK1G2P78368 415 aa11.89□□□□□ -0.51
DNMT3A-202ENST00000321117 PRAMEF17Q5VTA0 474 aa11.89□□□□□ -0.51
DNMT3A-202ENST00000321117 TMEM64Q6YI46 380 aa11.89□□□□□ -0.51
DNMT3A-202ENST00000321117 ZNF248Q8NDW4 579 aa11.89□□□□□ -0.51
DNMT3A-202ENST00000321117 BBS1Q8NFJ9 593 aa11.89□□□□□ -0.51
DNMT3A-202ENST00000321117 BRIX1Q8TDN6 353 aaKnown RBP11.89□□□□□ -0.51
DNMT3A-202ENST00000321117 HMGB4Q8WW32 186 aa11.89□□□□□ -0.51
DNMT3A-202ENST00000321117 DHRS9Q9BPW9 319 aa11.89□□□□□ -0.51
DNMT3A-202ENST00000321117 TRPV4Q9HBA0 871 aa11.89□□□□□ -0.51
DNMT3A-202ENST00000321117 Q9N2J8 555 aa11.89□□□□□ -0.51
DNMT3A-202ENST00000321117 ATP13A2Q9NQ11 1180 aa11.89□□□□□ -0.51
DNMT3A-202ENST00000321117 CXXC1Q9P0U4 656 aaPredicted RBP11.89□□□□□ -0.51
DNMT3A-202ENST00000321117 STON1Q9Y6Q2 735 aa11.89□□□□□ -0.51
DNMT3A-202ENST00000321117 CDHR4A6H8M9 788 aa11.89□□□□□ -0.51
DNMT3A-202ENST00000321117 PLA2G10O15496 165 aa11.89□□□□□ -0.51
DNMT3A-202ENST00000321117 NDUFB2O95178 105 aa11.89□□□□□ -0.51
DNMT3A-202ENST00000321117 AK1P00568 194 aa11.89□□□□□ -0.51
DNMT3A-202ENST00000321117 NRG3P56975 720 aa11.89□□□□□ -0.51
DNMT3A-202ENST00000321117 RPS15AP62244 130 aaKnown RBP11.89□□□□□ -0.51
DNMT3A-202ENST00000321117 OPCMLQ14982 345 aa11.89□□□□□ -0.51
DNMT3A-202ENST00000321117 OR1Q1Q15612 314 aa11.89□□□□□ -0.51
DNMT3A-202ENST00000321117 ZNF628Q5EBL2 1059 aa11.89□□□□□ -0.51
DNMT3A-202ENST00000321117 ZNF620Q6ZNG0 422 aa11.89□□□□□ -0.51
DNMT3A-202ENST00000321117 ZNF619Q8N2I2 560 aa11.89□□□□□ -0.51
DNMT3A-202ENST00000321117 LAMP5Q9UJQ1 280 aa11.89□□□□□ -0.51
DNMT3A-202ENST00000321117 NPFFR2Q9Y5X5 522 aa11.89□□□□□ -0.51
DNMT3A-202ENST00000321117 TRABD2BA6NFA1 517 aa11.89□□□□□ -0.51
DNMT3A-202ENST00000321117 ENDOUP21128 410 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms