RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 PRR22Q8IZ63 422 aa12.9□□□□□ -0.34
SPAST-201ENST00000315285 DIO2Q92813 273 aa12.9□□□□□ -0.34
SPAST-201ENST00000315285 SLCO4A1Q96BD0 722 aa12.9□□□□□ -0.34
SPAST-201ENST00000315285 TMEM38AQ9H6F2 299 aa12.9□□□□□ -0.34
SPAST-201ENST00000315285 PCDH10Q9P2E7 1040 aa12.9□□□□□ -0.34
SPAST-201ENST00000315285 RARRES3Q9UL19 164 aa12.9□□□□□ -0.34
SPAST-201ENST00000315285 PPT2Q9UMR5 302 aa12.9□□□□□ -0.34
SPAST-201ENST00000315285 SLC7A11Q9UPY5 501 aa12.9□□□□□ -0.34
SPAST-201ENST00000315285 NUP205Q92621 2012 aa12.9□□□□□ -0.34
SPAST-201ENST00000315285 ZNF217O75362 1048 aa12.9□□□□□ -0.34
SPAST-201ENST00000315285 IL33O95760 270 aa12.9□□□□□ -0.34
SPAST-201ENST00000315285 APOC3P02656 99 aa12.9□□□□□ -0.34
SPAST-201ENST00000315285 TFP02787 698 aa12.9□□□□□ -0.34
SPAST-201ENST00000315285 SYPP08247 313 aa12.9□□□□□ -0.34
SPAST-201ENST00000315285 F3P13726 295 aa12.9□□□□□ -0.34
SPAST-201ENST00000315285 CD34P28906 385 aa12.9□□□□□ -0.34
SPAST-201ENST00000315285 MCATQ8IVS2 390 aaKnown RBP12.9□□□□□ -0.34
SPAST-201ENST00000315285 SERPINA12Q8IW75 414 aa12.9□□□□□ -0.34
SPAST-201ENST00000315285 PDZD9Q8IXQ8 264 aa12.9□□□□□ -0.34
SPAST-201ENST00000315285 MFSD9Q8NBP5 474 aa12.9□□□□□ -0.34
SPAST-201ENST00000315285 EPHX3Q9H6B9 360 aa12.9□□□□□ -0.34
SPAST-201ENST00000315285 HHATLQ9HCP6 504 aa12.9□□□□□ -0.34
SPAST-201ENST00000315285 ASB1Q9Y576 335 aa12.9□□□□□ -0.34
SPAST-201ENST00000315285 BORCS7-ASMTA0A0B4J1R7 106 aa12.9□□□□□ -0.34
SPAST-201ENST00000315285 A8MVJ9 347 aa12.9□□□□□ -0.34
SPAST-201ENST00000315285 ACOT7O00154 380 aa12.9□□□□□ -0.34
SPAST-201ENST00000315285 RAD1O60671 282 aa12.9□□□□□ -0.34
SPAST-201ENST00000315285 EGFP01133 1207 aa12.9□□□□□ -0.34
SPAST-201ENST00000315285 SCG5P05408 212 aa12.9□□□□□ -0.34
SPAST-201ENST00000315285 NPPBP16860 134 aa12.9□□□□□ -0.34
SPAST-201ENST00000315285 GJA4P35212 333 aa12.9□□□□□ -0.34
SPAST-201ENST00000315285 XCR1P46094 333 aa12.9□□□□□ -0.34
SPAST-201ENST00000315285 PLP2Q04941 152 aa12.9□□□□□ -0.34
SPAST-201ENST00000315285 PDE7AQ13946 482 aa12.9□□□□□ -0.34
SPAST-201ENST00000315285 CBFBQ13951 182 aa12.9□□□□□ -0.34
SPAST-201ENST00000315285 MRPL2Q5T653 305 aaKnown RBP12.9□□□□□ -0.34
SPAST-201ENST00000315285 HAGHLQ6PII5 290 aaPredicted RBP12.9□□□□□ -0.34
SPAST-201ENST00000315285 RSPO2Q6UXX9 243 aaPredicted RBP12.9□□□□□ -0.34
SPAST-201ENST00000315285 SPNS2Q8IVW8 549 aa12.9□□□□□ -0.34
SPAST-201ENST00000315285 ASB12Q8WXK4 309 aa12.9□□□□□ -0.34
SPAST-201ENST00000315285 MYADMQ96S97 322 aa12.9□□□□□ -0.34
SPAST-201ENST00000315285 CDCA3Q99618 268 aaPredicted RBP12.9□□□□□ -0.34
SPAST-201ENST00000315285 C1QTNF3Q9BXJ4 246 aa12.9□□□□□ -0.34
SPAST-201ENST00000315285 LOXHD1Q8IVV2 1947 aa12.9□□□□□ -0.34
SPAST-201ENST00000315285 COL16A1Q07092 1604 aaPredicted RBP12.9□□□□□ -0.34
SPAST-201ENST00000315285 H7C417 338 aa12.9□□□□□ -0.34
SPAST-201ENST00000315285 PRAF2O60831 178 aa12.9□□□□□ -0.34
SPAST-201ENST00000315285 PLATP00750 562 aa12.9□□□□□ -0.34
SPAST-201ENST00000315285 GABRA5P31644 462 aa12.9□□□□□ -0.34
SPAST-201ENST00000315285 CAV3P56539 151 aa12.9□□□□□ -0.34
SPAST-201ENST00000315285 TATDN3Q17R31 274 aa12.9□□□□□ -0.34
SPAST-201ENST00000315285 C3orf38Q5JPI3 329 aa12.9□□□□□ -0.34
SPAST-201ENST00000315285 OR5M11Q96RB7 305 aa12.9□□□□□ -0.34
SPAST-201ENST00000315285 CPNE7Q9UBL6 633 aa12.9□□□□□ -0.34
SPAST-201ENST00000315285 TESQ9UGI8 421 aaKnown RBP12.9□□□□□ -0.34
SPAST-201ENST00000315285 DCDC2BA2VCK2 349 aa12.89□□□□□ -0.35
SPAST-201ENST00000315285 SLC9B1P1A6NJY1 282 aa12.89□□□□□ -0.35
SPAST-201ENST00000315285 SC5DO75845 299 aa12.89□□□□□ -0.35
SPAST-201ENST00000315285 ELAVL4P26378 380 aaKnown RBP12.89□□□□□ -0.35
SPAST-201ENST00000315285 HTR2AP28223 471 aa12.89□□□□□ -0.35
SPAST-201ENST00000315285 CRABP1P29762 137 aa12.89□□□□□ -0.35
SPAST-201ENST00000315285 ISL1P61371 349 aa12.89□□□□□ -0.35
SPAST-201ENST00000315285 TLE3Q04726 772 aa12.89□□□□□ -0.35
SPAST-201ENST00000315285 FAM78AQ5JUQ0 283 aa12.89□□□□□ -0.35
SPAST-201ENST00000315285 STEAP3Q658P3 488 aa12.89□□□□□ -0.35
SPAST-201ENST00000315285 SLC7A5P1Q8MH63 180 aa12.89□□□□□ -0.35
SPAST-201ENST00000315285 FAM3CQ92520 227 aa12.89□□□□□ -0.35
SPAST-201ENST00000315285 DDIT4LQ96D03 193 aa12.89□□□□□ -0.35
SPAST-201ENST00000315285 ELMOD3Q96FG2 381 aa12.89□□□□□ -0.35
SPAST-201ENST00000315285 DUS3LQ96G46 650 aaKnown RBP12.89□□□□□ -0.35
SPAST-201ENST00000315285 TSNAXQ99598 290 aaKnown RBP12.89□□□□□ -0.35
SPAST-201ENST00000315285 LMF2Q9BU23 707 aaKnown RBP12.89□□□□□ -0.35
SPAST-201ENST00000315285 A0A0G2JMP0 313 aa12.89□□□□□ -0.35
SPAST-201ENST00000315285 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.89□□□□□ -0.35
SPAST-201ENST00000315285 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.89□□□□□ -0.35
SPAST-201ENST00000315285 TVP23AA6NH52 213 aa12.89□□□□□ -0.35
SPAST-201ENST00000315285 SLC1A3P43003 542 aa12.89□□□□□ -0.35
SPAST-201ENST00000315285 LSSP48449 732 aa12.89□□□□□ -0.35
SPAST-201ENST00000315285 ERVFC1P60507 584 aa12.89□□□□□ -0.35
SPAST-201ENST00000315285 REEP5Q00765 189 aa12.89□□□□□ -0.35
SPAST-201ENST00000315285 ADPRMQ3LIE5 342 aa12.89□□□□□ -0.35
SPAST-201ENST00000315285 OR4M2Q8NGB6 313 aa12.89□□□□□ -0.35
SPAST-201ENST00000315285 ADAMTS14Q8WXS8 1223 aa12.89□□□□□ -0.35
SPAST-201ENST00000315285 TM4SF18Q96CE8 201 aa12.89□□□□□ -0.35
SPAST-201ENST00000315285 COQ10AQ96MF6 247 aa12.89□□□□□ -0.35
SPAST-201ENST00000315285 LDAHQ9H6V9 325 aa12.89□□□□□ -0.35
SPAST-201ENST00000315285 MED17Q9NVC6 651 aa12.89□□□□□ -0.35
SPAST-201ENST00000315285 ARPC1BO15143 372 aaKnown RBP12.89□□□□□ -0.35
SPAST-201ENST00000315285 SYT7O43581 403 aa12.89□□□□□ -0.35
SPAST-201ENST00000315285 MRPS10P82664 201 aaKnown RBP12.89□□□□□ -0.35
SPAST-201ENST00000315285 EIF2B1Q14232 305 aaKnown RBP12.89□□□□□ -0.35
SPAST-201ENST00000315285 PLK5Q496M5 336 aa12.89□□□□□ -0.35
SPAST-201ENST00000315285 FAM69AQ5T7M9 428 aa12.89□□□□□ -0.35
SPAST-201ENST00000315285 AWAT2Q6E213 333 aa12.89□□□□□ -0.35
SPAST-201ENST00000315285 MTFR2Q6P444 385 aa12.89□□□□□ -0.35
SPAST-201ENST00000315285 LRRC69Q6ZNQ3 347 aa12.89□□□□□ -0.35
SPAST-201ENST00000315285 Q6ZNX1 250 aa12.89□□□□□ -0.35
SPAST-201ENST00000315285 SSX6Q7RTT6 188 aa12.89□□□□□ -0.35
SPAST-201ENST00000315285 KIF18BQ86Y91 864 aa12.89□□□□□ -0.35
SPAST-201ENST00000315285 LAX1Q8IWV1 398 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms