RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 SLC38A6Q8IZM9 456 aa12.87□□□□□ -0.35
MKS1-201ENST00000313863 LRRC25Q8N386 305 aaPredicted RBP12.87□□□□□ -0.35
MKS1-201ENST00000313863 RPLP0P6Q8NHW5 317 aa12.87□□□□□ -0.35
MKS1-201ENST00000313863 TMEM239Q8WW34 195 aa12.87□□□□□ -0.35
MKS1-201ENST00000313863 YIPF5Q969M3 257 aa12.87□□□□□ -0.35
MKS1-201ENST00000313863 NXPE3Q969Y0 559 aa12.87□□□□□ -0.35
MKS1-201ENST00000313863 NXPE2Q96DL1 559 aa12.87□□□□□ -0.35
MKS1-201ENST00000313863 MAP6Q96JE9 813 aa12.87□□□□□ -0.35
MKS1-201ENST00000313863 SORCS2Q96PQ0 1159 aa12.87□□□□□ -0.35
MKS1-201ENST00000313863 TIMP4Q99727 224 aa12.87□□□□□ -0.35
MKS1-201ENST00000313863 TIMM29Q9BSF4 260 aa12.87□□□□□ -0.35
MKS1-201ENST00000313863 ERVMER34-1Q9H9K5 563 aa12.87□□□□□ -0.35
MKS1-201ENST00000313863 UBQLN2Q9UHD9 624 aa12.87□□□□□ -0.35
MKS1-201ENST00000313863 IL20RAQ9UHF4 553 aa12.87□□□□□ -0.35
MKS1-201ENST00000313863 ZNF223Q9UK11 482 aaPredicted RBP12.87□□□□□ -0.35
MKS1-201ENST00000313863 SLC35A3Q9Y2D2 325 aa12.87□□□□□ -0.35
MKS1-201ENST00000313863 SPEF1Q9Y4P9 236 aa12.87□□□□□ -0.35
MKS1-201ENST00000313863 DVL2O14641 736 aa12.86□□□□□ -0.35
MKS1-201ENST00000313863 FCMRO60667 390 aa12.86□□□□□ -0.35
MKS1-201ENST00000313863 KCNJ13O60928 360 aa12.86□□□□□ -0.35
MKS1-201ENST00000313863 SC5DO75845 299 aa12.86□□□□□ -0.35
MKS1-201ENST00000313863 DBIP07108 87 aaKnown RBP12.86□□□□□ -0.35
MKS1-201ENST00000313863 PRG2P13727 222 aa12.86□□□□□ -0.35
MKS1-201ENST00000313863 GIFP27352 417 aa12.86□□□□□ -0.35
MKS1-201ENST00000313863 EPHA4P54764 986 aa12.86□□□□□ -0.35
MKS1-201ENST00000313863 EEF1A1P68104 462 aaKnown RBP12.86□□□□□ -0.35
MKS1-201ENST00000313863 SNTA1Q13424 505 aa12.86□□□□□ -0.35
MKS1-201ENST00000313863 ACSM3Q53FZ2 586 aa12.86□□□□□ -0.35
MKS1-201ENST00000313863 CLLU1Q5K131 121 aa12.86□□□□□ -0.35
MKS1-201ENST00000313863 SIAH3Q8IW03 269 aa12.86□□□□□ -0.35
MKS1-201ENST00000313863 SUSD6Q92537 303 aa12.86□□□□□ -0.35
MKS1-201ENST00000313863 KAT2AQ92830 837 aa12.86□□□□□ -0.35
MKS1-201ENST00000313863 CDS1Q92903 461 aa12.86□□□□□ -0.35
MKS1-201ENST00000313863 KISS1RQ969F8 398 aaPredicted RBP12.86□□□□□ -0.35
MKS1-201ENST00000313863 TEAD3Q99594 435 aa12.86□□□□□ -0.35
MKS1-201ENST00000313863 IFT27Q9BW83 186 aa12.86□□□□□ -0.35
MKS1-201ENST00000313863 TEX101Q9BY14 249 aa12.86□□□□□ -0.35
MKS1-201ENST00000313863 DPH1Q9BZG8 443 aa12.86□□□□□ -0.35
MKS1-201ENST00000313863 POLMQ9NP87 494 aaPredicted RBP12.86□□□□□ -0.35
MKS1-201ENST00000313863 SLCO1C1Q9NYB5 712 aa12.86□□□□□ -0.35
MKS1-201ENST00000313863 HAO2Q9NYQ3 351 aa12.86□□□□□ -0.35
MKS1-201ENST00000313863 MAT2BQ9NZL9 334 aa12.86□□□□□ -0.35
MKS1-201ENST00000313863 DEC1Q9P2X7 70 aa12.86□□□□□ -0.35
MKS1-201ENST00000313863 FBXL21Q9UKT6 434 aa12.86□□□□□ -0.35
MKS1-201ENST00000313863 GOLGA4Q13439 2230 aaKnown RBP12.86□□□□□ -0.35
MKS1-201ENST00000313863 TUBAL3A6NHL2 446 aa12.85□□□□□ -0.35
MKS1-201ENST00000313863 C4orf51C9J302 202 aa12.85□□□□□ -0.35
MKS1-201ENST00000313863 PRRT4C9JH25 899 aa12.85□□□□□ -0.35
MKS1-201ENST00000313863 J3QLW9 94 aa12.85□□□□□ -0.35
MKS1-201ENST00000313863 FLRT2O43155 660 aa12.85□□□□□ -0.35
MKS1-201ENST00000313863 SSNA1O43805 119 aa12.85□□□□□ -0.35
MKS1-201ENST00000313863 TMEM127O75204 238 aa12.85□□□□□ -0.35
MKS1-201ENST00000313863 CLTBP09497 229 aa12.85□□□□□ -0.35
MKS1-201ENST00000313863 HNRNPA1P09651 372 aaKnown RBP eCLIP12.85□□□□□ -0.35
MKS1-201ENST00000313863 SBK2P0C263 348 aa12.85□□□□□ -0.35
MKS1-201ENST00000313863 ZNF19P17023 458 aa12.85□□□□□ -0.35
MKS1-201ENST00000313863 ZNF3P17036 446 aa12.85□□□□□ -0.35
MKS1-201ENST00000313863 POU3F3P20264 500 aaPredicted RBP12.85□□□□□ -0.35
MKS1-201ENST00000313863 DNASE1P24855 282 aa12.85□□□□□ -0.35
MKS1-201ENST00000313863 BMP8BP34820 402 aa12.85□□□□□ -0.35
MKS1-201ENST00000313863 OR10A3P58181 314 aa12.85□□□□□ -0.35
MKS1-201ENST00000313863 RAB8AP61006 207 aa12.85□□□□□ -0.35
MKS1-201ENST00000313863 FOXK2Q01167 660 aa12.85□□□□□ -0.35
MKS1-201ENST00000313863 MLF2Q15773 248 aaPredicted RBP12.85□□□□□ -0.35
MKS1-201ENST00000313863 GSG1Q2KHT4 349 aa12.85□□□□□ -0.35
MKS1-201ENST00000313863 FAM69AQ5T7M9 428 aa12.85□□□□□ -0.35
MKS1-201ENST00000313863 GARNL3Q5VVW2 1013 aa12.85□□□□□ -0.35
MKS1-201ENST00000313863 GPR139Q6DWJ6 353 aa12.85□□□□□ -0.35
MKS1-201ENST00000313863 DMKNQ6E0U4 476 aaPredicted RBP12.85□□□□□ -0.35
MKS1-201ENST00000313863 TMPRSS11FQ6ZWK6 438 aa12.85□□□□□ -0.35
MKS1-201ENST00000313863 BMP8AQ7Z5Y6 402 aa12.85□□□□□ -0.35
MKS1-201ENST00000313863 C12orf40Q86WS4 652 aa12.85□□□□□ -0.35
MKS1-201ENST00000313863 ETFBKMTQ8IXQ9 262 aa12.85□□□□□ -0.35
MKS1-201ENST00000313863 LSMEM1Q8N8F7 131 aa12.85□□□□□ -0.35
MKS1-201ENST00000313863 OR4C6Q8NH72 309 aa12.85□□□□□ -0.35
MKS1-201ENST00000313863 GAL3ST3Q96A11 431 aa12.85□□□□□ -0.35
MKS1-201ENST00000313863 DACT3Q96B18 629 aaPredicted RBP12.85□□□□□ -0.35
MKS1-201ENST00000313863 OMA1Q96E52 524 aa12.85□□□□□ -0.35
MKS1-201ENST00000313863 C4orf36Q96KX1 117 aa12.85□□□□□ -0.35
MKS1-201ENST00000313863 SPRTNQ9H040 489 aaPredicted RBP12.85□□□□□ -0.35
MKS1-201ENST00000313863 XKR8Q9H6D3 395 aa12.85□□□□□ -0.35
MKS1-201ENST00000313863 WDR26Q9H7D7 661 aa12.85□□□□□ -0.35
MKS1-201ENST00000313863 MED20Q9H944 212 aa12.85□□□□□ -0.35
MKS1-201ENST00000313863 SLC6A20Q9NP91 592 aa12.85□□□□□ -0.35
MKS1-201ENST00000313863 C14orf105Q9NVL8 296 aa12.85□□□□□ -0.35
MKS1-201ENST00000313863 TBX21Q9UL17 535 aa12.85□□□□□ -0.35
MKS1-201ENST00000313863 PRELID1Q9Y255 219 aa12.85□□□□□ -0.35
MKS1-201ENST00000313863 NAP1L6A6NFF2 107 aa12.85□□□□□ -0.35
MKS1-201ENST00000313863 GPR171O14626 319 aa12.85□□□□□ -0.35
MKS1-201ENST00000313863 HYAL3O43820 417 aaPredicted RBP12.85□□□□□ -0.35
MKS1-201ENST00000313863 GATBO75879 557 aaKnown RBP12.85□□□□□ -0.35
MKS1-201ENST00000313863 ZIC2O95409 532 aaPredicted RBP12.85□□□□□ -0.35
MKS1-201ENST00000313863 IFNGP01579 166 aa12.85□□□□□ -0.35
MKS1-201ENST00000313863 ASGR2P07307 311 aa12.85□□□□□ -0.35
MKS1-201ENST00000313863 SRP9P49458 86 aaKnown RBP12.85□□□□□ -0.35
MKS1-201ENST00000313863 ZNF136P52737 540 aa12.85□□□□□ -0.35
MKS1-201ENST00000313863 SLC16A1P53985 500 aa12.85□□□□□ -0.35
MKS1-201ENST00000313863 ZNF234Q14588 700 aa12.85□□□□□ -0.35
MKS1-201ENST00000313863 SLC51BQ86UW2 128 aa12.85□□□□□ -0.35
MKS1-201ENST00000313863 LSM14AQ8ND56 463 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms