RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 NEURL3Q96EH8 262 aa8.59□□□□□ -1.03
PTPRE-202ENST00000306042 PRRC1Q96M27 445 aa8.59□□□□□ -1.03
PTPRE-202ENST00000306042 STACQ99469 402 aa8.59□□□□□ -1.03
PTPRE-202ENST00000306042 TTYH2Q9BSA4 534 aa8.59□□□□□ -1.03
PTPRE-202ENST00000306042 POLE3Q9NRF9 147 aa8.59□□□□□ -1.03
PTPRE-202ENST00000306042 DUSP22Q9NRW4 184 aa8.59□□□□□ -1.03
PTPRE-202ENST00000306042 CCM2LQ9NUG4 571 aaPredicted RBP8.59□□□□□ -1.03
PTPRE-202ENST00000306042 FBXL4Q9UKA2 621 aa8.59□□□□□ -1.03
PTPRE-202ENST00000306042 NOSIPQ9Y314 301 aaKnown RBP8.59□□□□□ -1.03
PTPRE-202ENST00000306042 WIF1Q9Y5W5 379 aa8.59□□□□□ -1.03
PTPRE-202ENST00000306042 GPR171O14626 319 aa8.59□□□□□ -1.03
PTPRE-202ENST00000306042 B4GAT1O43505 415 aa8.59□□□□□ -1.03
PTPRE-202ENST00000306042 ADAP00813 363 aa8.59□□□□□ -1.03
PTPRE-202ENST00000306042 IL2RAP01589 272 aa8.59□□□□□ -1.03
PTPRE-202ENST00000306042 PNLIPP16233 465 aa8.59□□□□□ -1.03
PTPRE-202ENST00000306042 POU3F1Q03052 451 aaPredicted RBP8.59□□□□□ -1.03
PTPRE-202ENST00000306042 DDI2Q5TDH0 399 aa8.59□□□□□ -1.03
PTPRE-202ENST00000306042 LRFN4Q6PJG9 635 aa8.59□□□□□ -1.03
PTPRE-202ENST00000306042 AAED1Q7RTV5 226 aa8.59□□□□□ -1.03
PTPRE-202ENST00000306042 DTWD1Q8N5C7 304 aa8.59□□□□□ -1.03
PTPRE-202ENST00000306042 SETD6Q8TBK2 473 aa8.59□□□□□ -1.03
PTPRE-202ENST00000306042 SPRYD4Q8WW59 207 aaPredicted RBP8.59□□□□□ -1.03
PTPRE-202ENST00000306042 FBXL20Q96IG2 436 aa8.59□□□□□ -1.03
PTPRE-202ENST00000306042 SLC45A3Q96JT2 553 aa8.59□□□□□ -1.03
PTPRE-202ENST00000306042 TTTY10Q9BZA0 68 aa8.59□□□□□ -1.03
PTPRE-202ENST00000306042 ULBP2Q9BZM5 246 aa8.59□□□□□ -1.03
PTPRE-202ENST00000306042 TMEM74BQ9NUR3 256 aa8.59□□□□□ -1.03
PTPRE-202ENST00000306042 TMEM184BQ9Y519 407 aaPredicted RBP8.59□□□□□ -1.03
PTPRE-202ENST00000306042 UNC13CQ8NB66 2214 aa8.59□□□□□ -1.03
PTPRE-202ENST00000306042 MGAMO43451 1857 aa8.59□□□□□ -1.03
PTPRE-202ENST00000306042 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.59□□□□□ -1.03
PTPRE-202ENST00000306042 KLK8O60259 260 aa8.59□□□□□ -1.03
PTPRE-202ENST00000306042 ENPP1P22413 925 aa8.59□□□□□ -1.03
PTPRE-202ENST00000306042 GPR107Q5VW38 600 aa8.59□□□□□ -1.03
PTPRE-202ENST00000306042 ADNP2Q6IQ32 1131 aa8.59□□□□□ -1.03
PTPRE-202ENST00000306042 RHBDD2Q6NTF9 364 aa8.59□□□□□ -1.03
PTPRE-202ENST00000306042 TCTN3Q6NUS6 607 aa8.59□□□□□ -1.03
PTPRE-202ENST00000306042 PAMR1Q6UXH9 720 aa8.59□□□□□ -1.03
PTPRE-202ENST00000306042 ANKK1Q8NFD2 765 aa8.59□□□□□ -1.03
PTPRE-202ENST00000306042 C9orf43Q8TAL5 461 aaPredicted RBP8.59□□□□□ -1.03
PTPRE-202ENST00000306042 WDR20Q8TBZ3 569 aa8.59□□□□□ -1.03
PTPRE-202ENST00000306042 SLC38A5Q8WUX1 472 aa8.59□□□□□ -1.03
PTPRE-202ENST00000306042 BPIFA2Q96DR5 249 aa8.59□□□□□ -1.03
PTPRE-202ENST00000306042 C1QTNF3Q9BXJ4 246 aa8.59□□□□□ -1.03
PTPRE-202ENST00000306042 LHPPQ9H008 270 aa8.59□□□□□ -1.03
PTPRE-202ENST00000306042 UCK1Q9HA47 277 aa8.59□□□□□ -1.03
PTPRE-202ENST00000306042 DDX28Q9NUL7 540 aaKnown RBP8.59□□□□□ -1.03
PTPRE-202ENST00000306042 LUZP4Q9P127 313 aa8.59□□□□□ -1.03
PTPRE-202ENST00000306042 CACNA1EQ15878 2313 aa8.59□□□□□ -1.03
PTPRE-202ENST00000306042 SEC16AO15027 2179 aa8.59□□□□□ -1.03
PTPRE-202ENST00000306042 A0A075B6Q4 140 aa8.59□□□□□ -1.04
PTPRE-202ENST00000306042 GGT3PA6NGU5 568 aa8.59□□□□□ -1.04
PTPRE-202ENST00000306042 EIF1BO60739 113 aaKnown RBP8.59□□□□□ -1.04
PTPRE-202ENST00000306042 SLC43A1O75387 559 aa8.59□□□□□ -1.04
PTPRE-202ENST00000306042 GP1BAP07359 652 aa8.59□□□□□ -1.04
PTPRE-202ENST00000306042 BSGP35613 385 aa8.59□□□□□ -1.04
PTPRE-202ENST00000306042 RGS19P49795 217 aa8.59□□□□□ -1.04
PTPRE-202ENST00000306042 CRISP1P54107 249 aa8.59□□□□□ -1.04
PTPRE-202ENST00000306042 AQP4P55087 323 aa8.59□□□□□ -1.04
PTPRE-202ENST00000306042 PPP2R2BQ00005 443 aa8.59□□□□□ -1.04
PTPRE-202ENST00000306042 ECH1Q13011 328 aa8.59□□□□□ -1.04
PTPRE-202ENST00000306042 GAS6Q14393 721 aa8.59□□□□□ -1.04
PTPRE-202ENST00000306042 ENTPD8Q5MY95 495 aa8.59□□□□□ -1.04
PTPRE-202ENST00000306042 GFRALQ6UXV0 394 aa8.59□□□□□ -1.04
PTPRE-202ENST00000306042 PRSS42Q7Z5A4 293 aa8.59□□□□□ -1.04
PTPRE-202ENST00000306042 YRDCQ86U90 279 aaKnown RBP8.59□□□□□ -1.04
PTPRE-202ENST00000306042 ZNF101Q8IZC7 436 aa8.59□□□□□ -1.04
PTPRE-202ENST00000306042 MZB1Q8WU39 189 aa8.59□□□□□ -1.04
PTPRE-202ENST00000306042 CT55Q8WUE5 264 aa8.59□□□□□ -1.04
PTPRE-202ENST00000306042 GAL3ST1Q99999 423 aa8.59□□□□□ -1.04
PTPRE-202ENST00000306042 CALHM2Q9HA72 323 aa8.59□□□□□ -1.04
PTPRE-202ENST00000306042 CXorf21Q9HAI6 301 aa8.59□□□□□ -1.04
PTPRE-202ENST00000306042 ZNF71Q9NQZ8 489 aaPredicted RBP8.59□□□□□ -1.04
PTPRE-202ENST00000306042 PCDHB16Q9NRJ7 776 aa8.59□□□□□ -1.04
PTPRE-202ENST00000306042 CNIH4Q9P003 139 aa8.59□□□□□ -1.04
PTPRE-202ENST00000306042 IL20RAQ9UHF4 553 aa8.59□□□□□ -1.04
PTPRE-202ENST00000306042 PCOLCE2Q9UKZ9 415 aa8.59□□□□□ -1.04
PTPRE-202ENST00000306042 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.58□□□□□ -1.04
PTPRE-202ENST00000306042 A0A1W2PQ72 361 aa8.58□□□□□ -1.04
PTPRE-202ENST00000306042 hCG_1807616A0A1W2PRN6 198 aa8.58□□□□□ -1.04
PTPRE-202ENST00000306042 LNP1A1A4G5 178 aa8.58□□□□□ -1.04
PTPRE-202ENST00000306042 SLC22A31A6NKX4 558 aa8.58□□□□□ -1.04
PTPRE-202ENST00000306042 H3BSH0 61 aa8.58□□□□□ -1.04
PTPRE-202ENST00000306042 WNT1P04628 370 aa8.58□□□□□ -1.04
PTPRE-202ENST00000306042 CDKN2CP42773 168 aa8.58□□□□□ -1.04
PTPRE-202ENST00000306042 RPL5P46777 297 aaKnown RBP8.58□□□□□ -1.04
PTPRE-202ENST00000306042 C9orf135Q5VTT2 229 aa8.58□□□□□ -1.04
PTPRE-202ENST00000306042 LCN8Q6JVE9 175 aa8.58□□□□□ -1.04
PTPRE-202ENST00000306042 JAGN1Q8N5M9 183 aa8.58□□□□□ -1.04
PTPRE-202ENST00000306042 ANKRD53Q8N9V6 530 aa8.58□□□□□ -1.04
PTPRE-202ENST00000306042 SAP25Q8TEE9 199 aa8.58□□□□□ -1.04
PTPRE-202ENST00000306042 ZNF300Q96RE9 604 aaPredicted RBP8.58□□□□□ -1.04
PTPRE-202ENST00000306042 FEVQ99581 238 aa8.58□□□□□ -1.04
PTPRE-202ENST00000306042 CHCHD6Q9BRQ6 235 aa8.58□□□□□ -1.04
PTPRE-202ENST00000306042 C20orf27Q9GZN8 174 aa8.58□□□□□ -1.04
PTPRE-202ENST00000306042 QRSL1Q9H0R6 528 aaKnown RBP8.58□□□□□ -1.04
PTPRE-202ENST00000306042 SLC7A11Q9UPY5 501 aa8.58□□□□□ -1.04
PTPRE-202ENST00000306042 PCDHGA7Q9Y5G6 932 aa8.58□□□□□ -1.04
PTPRE-202ENST00000306042 TMED7-TICAM2A0A0A6YYA0 188 aa8.58□□□□□ -1.04
PTPRE-202ENST00000306042 PPP1R3DO95685 299 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms