RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 ATG4BQ9Y4P1 393 aa12.42□□□□□ -0.42
DDX54-201ENST00000306014 NUPL2O15504 423 aaKnown RBP12.42□□□□□ -0.42
DDX54-201ENST00000306014 CYB5AP00167 134 aa12.42□□□□□ -0.42
DDX54-201ENST00000306014 AK1P00568 194 aa12.42□□□□□ -0.42
DDX54-201ENST00000306014 HNRNPA1P09651 372 aaKnown RBP eCLIP12.42□□□□□ -0.42
DDX54-201ENST00000306014 IFITM3Q01628 133 aa12.42□□□□□ -0.42
DDX54-201ENST00000306014 EXOSC7Q15024 291 aaKnown RBP12.42□□□□□ -0.42
DDX54-201ENST00000306014 OR1Q1Q15612 314 aa12.42□□□□□ -0.42
DDX54-201ENST00000306014 ZNF542PQ5EBM4 170 aa12.42□□□□□ -0.42
DDX54-201ENST00000306014 METTL11BQ5VVY1 283 aa12.42□□□□□ -0.42
DDX54-201ENST00000306014 SFXN4Q6P4A7 337 aa12.42□□□□□ -0.42
DDX54-201ENST00000306014 SPAG16Q8N0X2 631 aa12.42□□□□□ -0.42
DDX54-201ENST00000306014 GALNT6Q8NCL4 622 aa12.42□□□□□ -0.42
DDX54-201ENST00000306014 SFXN5Q8TD22 340 aa12.42□□□□□ -0.42
DDX54-201ENST00000306014 SMARCD2Q92925 531 aa12.42□□□□□ -0.42
DDX54-201ENST00000306014 IL21RQ9HBE5 538 aa12.42□□□□□ -0.42
DDX54-201ENST00000306014 PRTFDC1Q9NRG1 225 aa12.42□□□□□ -0.42
DDX54-201ENST00000306014 HPF1Q9NWY4 346 aa12.42□□□□□ -0.42
DDX54-201ENST00000306014 CCL27Q9Y4X3 112 aa12.42□□□□□ -0.42
DDX54-201ENST00000306014 NOX1Q9Y5S8 564 aa12.42□□□□□ -0.42
DDX54-201ENST00000306014 A8MVJ9 347 aa12.42□□□□□ -0.42
DDX54-201ENST00000306014 C2orf74A8MZ97 194 aa12.42□□□□□ -0.42
DDX54-201ENST00000306014 HCRTR2O43614 444 aa12.42□□□□□ -0.42
DDX54-201ENST00000306014 PRKACBP22694 351 aa12.42□□□□□ -0.42
DDX54-201ENST00000306014 ATP5A1P25705 553 aaKnown RBP12.42□□□□□ -0.42
DDX54-201ENST00000306014 LIM2P55344 173 aa12.42□□□□□ -0.42
DDX54-201ENST00000306014 PDE7AQ13946 482 aa12.42□□□□□ -0.42
DDX54-201ENST00000306014 ZNF761Q86XN6 746 aaPredicted RBP12.42□□□□□ -0.42
DDX54-201ENST00000306014 POGLUT1Q8NBL1 392 aa12.42□□□□□ -0.42
DDX54-201ENST00000306014 IL17RDQ8NFM7 739 aa12.42□□□□□ -0.42
DDX54-201ENST00000306014 ZDHHC1Q8WTX9 485 aa12.42□□□□□ -0.42
DDX54-201ENST00000306014 APH1BQ8WW43 257 aa12.42□□□□□ -0.42
DDX54-201ENST00000306014 GIMAP1Q8WWP7 306 aa12.42□□□□□ -0.42
DDX54-201ENST00000306014 GHSRQ92847 366 aa12.42□□□□□ -0.42
DDX54-201ENST00000306014 KIAA1143Q96AT1 154 aaPredicted RBP12.42□□□□□ -0.42
DDX54-201ENST00000306014 MMABQ96EY8 250 aaPredicted RBP12.42□□□□□ -0.42
DDX54-201ENST00000306014 METTL17Q9H7H0 456 aaPredicted RBP12.42□□□□□ -0.42
DDX54-201ENST00000306014 NIPAL2Q9H841 368 aa12.42□□□□□ -0.42
DDX54-201ENST00000306014 TREM1Q9NP99 234 aa12.42□□□□□ -0.42
DDX54-201ENST00000306014 TRAV18A0A075B6X5 111 aa12.41□□□□□ -0.42
DDX54-201ENST00000306014 SLC9B1P1A6NJY1 282 aa12.41□□□□□ -0.42
DDX54-201ENST00000306014 TNFP01375 233 aa12.41□□□□□ -0.42
DDX54-201ENST00000306014 CA3P07451 260 aa12.41□□□□□ -0.42
DDX54-201ENST00000306014 CSRP3P50461 194 aa12.41□□□□□ -0.42
DDX54-201ENST00000306014 DEFB110Q30KQ9 67 aa12.41□□□□□ -0.42
DDX54-201ENST00000306014 DCST2Q5T1A1 773 aa12.41□□□□□ -0.42
DDX54-201ENST00000306014 MRPL2Q5T653 305 aaKnown RBP12.41□□□□□ -0.42
DDX54-201ENST00000306014 FAAH2Q6GMR7 532 aa12.41□□□□□ -0.42
DDX54-201ENST00000306014 NKAIN4Q8IVV8 208 aa12.41□□□□□ -0.42
DDX54-201ENST00000306014 ZNF615Q8N8J6 731 aa12.41□□□□□ -0.42
DDX54-201ENST00000306014 OR4M1Q8NGD0 313 aa12.41□□□□□ -0.42
DDX54-201ENST00000306014 TRIM43Q96BQ3 446 aaPredicted RBP12.41□□□□□ -0.42
DDX54-201ENST00000306014 WDR92Q96MX6 357 aa12.41□□□□□ -0.42
DDX54-201ENST00000306014 SRRQ9GZT4 340 aa12.41□□□□□ -0.42
DDX54-201ENST00000306014 ADAM29Q9UKF5 820 aa12.41□□□□□ -0.42
DDX54-201ENST00000306014 TMEM129A0AVI4 362 aa12.41□□□□□ -0.42
DDX54-201ENST00000306014 SOX1O00570 391 aaPredicted RBP12.41□□□□□ -0.42
DDX54-201ENST00000306014 TMPRSS11DO60235 418 aa12.41□□□□□ -0.42
DDX54-201ENST00000306014 RAD1O60671 282 aa12.41□□□□□ -0.42
DDX54-201ENST00000306014 ALX3O95076 343 aa12.41□□□□□ -0.42
DDX54-201ENST00000306014 RBMS1P29558 406 aaKnown RBP12.41□□□□□ -0.42
DDX54-201ENST00000306014 PCGF3Q3KNV8 242 aa12.41□□□□□ -0.42
DDX54-201ENST00000306014 GLCCI1Q86VQ1 547 aa12.41□□□□□ -0.42
DDX54-201ENST00000306014 NLGN4YQ8NFZ3 816 aaPredicted RBP12.41□□□□□ -0.42
DDX54-201ENST00000306014 OR5M3Q8NGP4 307 aa12.41□□□□□ -0.42
DDX54-201ENST00000306014 TBC1D20Q96BZ9 403 aa12.41□□□□□ -0.42
DDX54-201ENST00000306014 OR2M2Q96R28 347 aa12.41□□□□□ -0.42
DDX54-201ENST00000306014 G6PC3Q9BUM1 346 aa12.41□□□□□ -0.42
DDX54-201ENST00000306014 POTEKPQ9BYX7 375 aa12.41□□□□□ -0.42
DDX54-201ENST00000306014 PITHD1Q9GZP4 211 aaPredicted RBP12.41□□□□□ -0.42
DDX54-201ENST00000306014 SIDT1Q9NXL6 827 aaKnown RBP12.41□□□□□ -0.42
DDX54-201ENST00000306014 DSCR3O14972 297 aa12.41□□□□□ -0.42
DDX54-201ENST00000306014 TRAPPC2P0DI81 140 aa12.41□□□□□ -0.42
DDX54-201ENST00000306014 TRAPPC2BP0DI82 140 aa12.41□□□□□ -0.42
DDX54-201ENST00000306014 FUT1P19526 365 aa12.41□□□□□ -0.42
DDX54-201ENST00000306014 CTXN1P60606 82 aa12.41□□□□□ -0.42
DDX54-201ENST00000306014 C1orf61Q13536 156 aa12.41□□□□□ -0.42
DDX54-201ENST00000306014 BCL2L14Q9BZR8 327 aa12.41□□□□□ -0.42
DDX54-201ENST00000306014 SPNS1Q9H2V7 528 aa12.41□□□□□ -0.42
DDX54-201ENST00000306014 PLATP00750 562 aa12.41□□□□□ -0.42
DDX54-201ENST00000306014 CLDN12P56749 244 aa12.41□□□□□ -0.42
DDX54-201ENST00000306014 FXYD6P3P58550 94 aa12.41□□□□□ -0.42
DDX54-201ENST00000306014 HYAL4Q2M3T9 481 aa12.41□□□□□ -0.42
DDX54-201ENST00000306014 GLT8D1Q68CQ7 371 aa12.41□□□□□ -0.42
DDX54-201ENST00000306014 SLC16A11Q8NCK7 471 aa12.41□□□□□ -0.42
DDX54-201ENST00000306014 OR5AK2Q8NH90 309 aa12.41□□□□□ -0.42
DDX54-201ENST00000306014 RIT1Q92963 219 aa12.41□□□□□ -0.42
DDX54-201ENST00000306014 BTBD2Q9BX70 525 aa12.41□□□□□ -0.42
DDX54-201ENST00000306014 SEC61A2Q9H9S3 476 aa12.41□□□□□ -0.42
DDX54-201ENST00000306014 SLC52A3Q9NQ40 469 aa12.41□□□□□ -0.42
DDX54-201ENST00000306014 SEMA4GQ9NTN9 838 aa12.41□□□□□ -0.42
DDX54-201ENST00000306014 DNMT3BQ9UBC3 853 aaKnown RBP12.41□□□□□ -0.42
DDX54-201ENST00000306014 POLHQ9Y253 713 aa12.41□□□□□ -0.42
DDX54-201ENST00000306014 SLC35A3Q9Y2D2 325 aa12.41□□□□□ -0.42
DDX54-201ENST00000306014 F5H0A9 414 aaPredicted RBP12.4□□□□□ -0.42
DDX54-201ENST00000306014 ICMTO60725 284 aa12.4□□□□□ -0.42
DDX54-201ENST00000306014 PGAM2P15259 253 aa12.4□□□□□ -0.42
DDX54-201ENST00000306014 HTR1FP30939 366 aa12.4□□□□□ -0.42
DDX54-201ENST00000306014 FABP5Q01469 135 aa12.4□□□□□ -0.42
DDX54-201ENST00000306014 PDZD9Q8IXQ8 264 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms