RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 OR13C5Q8NGS8 318 aa13.11□□□□□ -0.31
SDC2-201ENST00000302190 OR5W2Q8NH69 310 aa13.11□□□□□ -0.31
SDC2-201ENST00000302190 ACOT11Q8WXI4 607 aaPredicted RBP13.11□□□□□ -0.31
SDC2-201ENST00000302190 GCDHQ92947 438 aaPredicted RBP13.11□□□□□ -0.31
SDC2-201ENST00000302190 ACTRT3Q9BYD9 372 aa13.11□□□□□ -0.31
SDC2-201ENST00000302190 IGLV3-16A0A075B6K0 115 aa13.11□□□□□ -0.31
SDC2-201ENST00000302190 TRIM64A6NGJ6 449 aa13.11□□□□□ -0.31
SDC2-201ENST00000302190 RNGTTO60942 597 aaKnown RBP13.11□□□□□ -0.31
SDC2-201ENST00000302190 GCM2O75603 506 aaPredicted RBP13.11□□□□□ -0.31
SDC2-201ENST00000302190 SLC25A12O75746 678 aa13.11□□□□□ -0.31
SDC2-201ENST00000302190 PLK5Q496M5 336 aa13.11□□□□□ -0.31
SDC2-201ENST00000302190 FAM78AQ5JUQ0 283 aa13.11□□□□□ -0.31
SDC2-201ENST00000302190 PRSS45Q7RTY3 260 aa13.11□□□□□ -0.31
SDC2-201ENST00000302190 OR2L5Q8NG80 312 aa13.11□□□□□ -0.31
SDC2-201ENST00000302190 SLC7A6Q92536 515 aa13.11□□□□□ -0.31
SDC2-201ENST00000302190 SMARCD2Q92925 531 aa13.11□□□□□ -0.31
SDC2-201ENST00000302190 TRMT61AQ96FX7 289 aaKnown RBP13.11□□□□□ -0.31
SDC2-201ENST00000302190 UQCC2Q9BRT2 126 aa13.11□□□□□ -0.31
SDC2-201ENST00000302190 CDCA4Q9BXL8 241 aa13.11□□□□□ -0.31
SDC2-201ENST00000302190 MKKSQ9NPJ1 570 aaPredicted RBP13.11□□□□□ -0.31
SDC2-201ENST00000302190 LIPT1Q9Y234 373 aa13.11□□□□□ -0.31
SDC2-201ENST00000302190 ELOA3DA6NLF2 546 aaPredicted RBP13.11□□□□□ -0.31
SDC2-201ENST00000302190 A8MVJ9 347 aa13.11□□□□□ -0.31
SDC2-201ENST00000302190 KDM4BO94953 1096 aa13.11□□□□□ -0.31
SDC2-201ENST00000302190 CSF3P09919 207 aa13.11□□□□□ -0.31
SDC2-201ENST00000302190 ATP5A1P25705 553 aaKnown RBP13.11□□□□□ -0.31
SDC2-201ENST00000302190 ENPP2Q13822 863 aa13.11□□□□□ -0.31
SDC2-201ENST00000302190 POU4F3Q15319 338 aa13.11□□□□□ -0.31
SDC2-201ENST00000302190 PGGHGQ32M88 737 aa13.11□□□□□ -0.31
SDC2-201ENST00000302190 ELOA3BQ3SY89 546 aa13.11□□□□□ -0.31
SDC2-201ENST00000302190 ACSM3Q53FZ2 586 aa13.11□□□□□ -0.31
SDC2-201ENST00000302190 ZNF547Q8IVP9 402 aa13.11□□□□□ -0.31
SDC2-201ENST00000302190 ADGRF3Q8IZF5 1079 aa13.11□□□□□ -0.31
SDC2-201ENST00000302190 ARL14Q8N4G2 192 aa13.11□□□□□ -0.31
SDC2-201ENST00000302190 POMGNT2Q8NAT1 580 aa13.11□□□□□ -0.31
SDC2-201ENST00000302190 LSM14AQ8ND56 463 aaKnown RBP13.11□□□□□ -0.31
SDC2-201ENST00000302190 ELOA3Q8NG57 546 aa13.11□□□□□ -0.31
SDC2-201ENST00000302190 METTL2AQ96IZ6 378 aaKnown RBP13.11□□□□□ -0.31
SDC2-201ENST00000302190 OR8D2Q9GZM6 311 aa13.11□□□□□ -0.31
SDC2-201ENST00000302190 MAS1P04201 325 aa13.1□□□□□ -0.31
SDC2-201ENST00000302190 ERP29P30040 261 aaKnown RBP13.1□□□□□ -0.31
SDC2-201ENST00000302190 STAT5AP42229 794 aa13.1□□□□□ -0.31
SDC2-201ENST00000302190 RUNX3Q13761 415 aa13.1□□□□□ -0.31
SDC2-201ENST00000302190 GFOD2Q3B7J2 385 aa13.1□□□□□ -0.31
SDC2-201ENST00000302190 UBQLNLQ8IYU4 475 aa13.1□□□□□ -0.31
SDC2-201ENST00000302190 CHST4Q8NCG5 386 aa13.1□□□□□ -0.31
SDC2-201ENST00000302190 TMEM239Q8WW34 195 aa13.1□□□□□ -0.31
SDC2-201ENST00000302190 PATE1Q8WXA2 126 aa13.1□□□□□ -0.31
SDC2-201ENST00000302190 AHCYL2Q96HN2 611 aaKnown RBP13.1□□□□□ -0.31
SDC2-201ENST00000302190 OR2A14Q96R47 310 aa13.1□□□□□ -0.31
SDC2-201ENST00000302190 POLDIP3Q9BY77 421 aaKnown RBP13.1□□□□□ -0.31
SDC2-201ENST00000302190 FN3KQ9H479 309 aa13.1□□□□□ -0.31
SDC2-201ENST00000302190 C6orf106Q9H6K1 298 aaPredicted RBP13.1□□□□□ -0.31
SDC2-201ENST00000302190 ATXN7L1Q9ULK2 861 aaPredicted RBP13.1□□□□□ -0.31
SDC2-201ENST00000302190 MYLKQ15746 1914 aa13.1□□□□□ -0.31
SDC2-201ENST00000302190 CARNS1A5YM72 827 aa13.1□□□□□ -0.31
SDC2-201ENST00000302190 RAB3BP20337 219 aa13.1□□□□□ -0.31
SDC2-201ENST00000302190 EIF1AXP47813 144 aaKnown RBP13.1□□□□□ -0.31
SDC2-201ENST00000302190 CCR6P51684 374 aa13.1□□□□□ -0.31
SDC2-201ENST00000302190 OR10A3P58181 314 aa13.1□□□□□ -0.31
SDC2-201ENST00000302190 AMZ1Q400G9 498 aa13.1□□□□□ -0.31
SDC2-201ENST00000302190 TRMT12Q53H54 448 aaKnown RBP13.1□□□□□ -0.31
SDC2-201ENST00000302190 MRPL2Q5T653 305 aaKnown RBP13.1□□□□□ -0.31
SDC2-201ENST00000302190 LNX2Q8N448 690 aa13.1□□□□□ -0.31
SDC2-201ENST00000302190 FBXL6Q8N531 539 aa13.1□□□□□ -0.31
SDC2-201ENST00000302190 IL17RDQ8NFM7 739 aa13.1□□□□□ -0.31
SDC2-201ENST00000302190 BPIFA2Q96DR5 249 aa13.1□□□□□ -0.31
SDC2-201ENST00000302190 CNRIP1Q96F85 164 aaPredicted RBP13.1□□□□□ -0.31
SDC2-201ENST00000302190 OR2M4Q96R27 311 aa13.1□□□□□ -0.31
SDC2-201ENST00000302190 RAB11FIP5Q9BXF6 653 aa13.1□□□□□ -0.31
SDC2-201ENST00000302190 CHST8Q9H2A9 424 aa13.1□□□□□ -0.31
SDC2-201ENST00000302190 ISG20L2Q9H9L3 353 aaKnown RBP13.1□□□□□ -0.31
SDC2-201ENST00000302190 SLC28A3Q9HAS3 691 aa13.1□□□□□ -0.31
SDC2-201ENST00000302190 HINT3Q9NQE9 182 aaKnown RBP13.1□□□□□ -0.31
SDC2-201ENST00000302190 STOML2Q9UJZ1 356 aa13.1□□□□□ -0.31
SDC2-201ENST00000302190 ACOD1A6NK06 481 aa13.1□□□□□ -0.31
SDC2-201ENST00000302190 SGK494L7N484 410 aa13.1□□□□□ -0.31
SDC2-201ENST00000302190 LINC01565O15544 149 aa13.1□□□□□ -0.31
SDC2-201ENST00000302190 RGS9O75916 674 aaPredicted RBP13.1□□□□□ -0.31
SDC2-201ENST00000302190 PLGP00747 810 aaPredicted RBP13.1□□□□□ -0.31
SDC2-201ENST00000302190 SYPP08247 313 aa13.1□□□□□ -0.31
SDC2-201ENST00000302190 CLUP10909 449 aa13.1□□□□□ -0.31
SDC2-201ENST00000302190 FNTBP49356 437 aa13.1□□□□□ -0.31
SDC2-201ENST00000302190 CRMP1Q14194 572 aa13.1□□□□□ -0.31
SDC2-201ENST00000302190 ZNF776Q68DI1 518 aaPredicted RBP13.1□□□□□ -0.31
SDC2-201ENST00000302190 OR5T3Q8NGG3 340 aa13.1□□□□□ -0.31
SDC2-201ENST00000302190 PFN4Q8NHR9 129 aa13.1□□□□□ -0.31
SDC2-201ENST00000302190 PEX11GQ96HA9 241 aa13.1□□□□□ -0.31
SDC2-201ENST00000302190 SGPP1Q9BX95 441 aa13.1□□□□□ -0.31
SDC2-201ENST00000302190 SYNPO2LQ9H987 977 aa13.1□□□□□ -0.31
SDC2-201ENST00000302190 TAS2R10Q9NYW0 307 aa13.1□□□□□ -0.31
SDC2-201ENST00000302190 MKL2Q9ULH7 1088 aa13.1□□□□□ -0.31
SDC2-201ENST00000302190 EXO1Q9UQ84 846 aaKnown RBP13.1□□□□□ -0.31
SDC2-201ENST00000302190 MRPS33Q9Y291 106 aaKnown RBP13.1□□□□□ -0.31
SDC2-201ENST00000302190 GPR55Q9Y2T6 319 aaPredicted RBP13.1□□□□□ -0.31
SDC2-201ENST00000302190 IER3IP1Q9Y5U9 82 aa13.1□□□□□ -0.31
SDC2-201ENST00000302190 AHCTF1Q8WYP5 2266 aa13.1□□□□□ -0.31
SDC2-201ENST00000302190 LRIT2A6NDA9 550 aa13.09□□□□□ -0.31
SDC2-201ENST00000302190 PRAMEF25A6NGN4 478 aa13.09□□□□□ -0.31
SDC2-201ENST00000302190 LRRN3E7EW58 273 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms