RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 LTB4RQ15722 352 aa13.65□□□□□ -0.22
COL6A2-201ENST00000300527 CST9Q5W186 159 aa13.65□□□□□ -0.22
COL6A2-201ENST00000300527 CD300LDQ6UXZ3 194 aa13.65□□□□□ -0.22
COL6A2-201ENST00000300527 FAM83HQ6ZRV2 1179 aaPredicted RBP13.65□□□□□ -0.22
COL6A2-201ENST00000300527 FGD2Q7Z6J4 655 aa13.65□□□□□ -0.22
COL6A2-201ENST00000300527 RFLNBQ8N5W9 214 aa13.65□□□□□ -0.22
COL6A2-201ENST00000300527 PRDM9Q9NQV7 894 aa13.65□□□□□ -0.22
COL6A2-201ENST00000300527 MARK1Q9P0L2 795 aa13.65□□□□□ -0.22
COL6A2-201ENST00000300527 AUP1Q9Y679 476 aa13.65□□□□□ -0.22
COL6A2-201ENST00000300527 NRG2O14511 850 aaPredicted RBP13.65□□□□□ -0.22
COL6A2-201ENST00000300527 CASC3O15234 703 aaKnown RBP13.65□□□□□ -0.22
COL6A2-201ENST00000300527 LATO43561 262 aa13.65□□□□□ -0.22
COL6A2-201ENST00000300527 GRPRP30550 384 aa13.65□□□□□ -0.22
COL6A2-201ENST00000300527 PITPNAQ00169 270 aa13.65□□□□□ -0.22
COL6A2-201ENST00000300527 DUSP2Q05923 314 aa13.65□□□□□ -0.22
COL6A2-201ENST00000300527 ZNF273Q14593 569 aa13.65□□□□□ -0.22
COL6A2-201ENST00000300527 Q6ZNB5 142 aa13.65□□□□□ -0.22
COL6A2-201ENST00000300527 ZNF620Q6ZNG0 422 aa13.65□□□□□ -0.22
COL6A2-201ENST00000300527 NPAS4Q8IUM7 802 aa13.65□□□□□ -0.22
COL6A2-201ENST00000300527 PFN4Q8NHR9 129 aa13.65□□□□□ -0.22
COL6A2-201ENST00000300527 ASB12Q8WXK4 309 aa13.65□□□□□ -0.22
COL6A2-201ENST00000300527 HGDQ93099 445 aa13.65□□□□□ -0.22
COL6A2-201ENST00000300527 OR14A2Q96R54 314 aa13.65□□□□□ -0.22
COL6A2-201ENST00000300527 PDCD1LG2Q9BQ51 273 aa13.65□□□□□ -0.22
COL6A2-201ENST00000300527 VN1R3Q9BXE9 311 aa13.65□□□□□ -0.22
COL6A2-201ENST00000300527 ZDHHC4Q9NPG8 344 aa13.65□□□□□ -0.22
COL6A2-201ENST00000300527 ENTPD4Q9Y227 616 aa13.65□□□□□ -0.22
COL6A2-201ENST00000300527 SCN10AQ9Y5Y9 1956 aa13.65□□□□□ -0.22
COL6A2-201ENST00000300527 TRAV27A0A087WT01 109 aa13.65□□□□□ -0.23
COL6A2-201ENST00000300527 ERI3O43414 337 aaKnown RBP13.65□□□□□ -0.23
COL6A2-201ENST00000300527 STX11O75558 287 aa13.65□□□□□ -0.23
COL6A2-201ENST00000300527 CBX7O95931 251 aa13.65□□□□□ -0.23
COL6A2-201ENST00000300527 HMGN1P05114 100 aa13.65□□□□□ -0.23
COL6A2-201ENST00000300527 NFYAP23511 347 aaPredicted RBP13.65□□□□□ -0.23
COL6A2-201ENST00000300527 TAS2R38P59533 333 aa13.65□□□□□ -0.23
COL6A2-201ENST00000300527 PRKCZQ05513 592 aa13.65□□□□□ -0.23
COL6A2-201ENST00000300527 GAREM2Q75VX8 874 aa13.65□□□□□ -0.23
COL6A2-201ENST00000300527 GDF7Q7Z4P5 450 aa13.65□□□□□ -0.23
COL6A2-201ENST00000300527 OR9A2Q8NGT5 310 aa13.65□□□□□ -0.23
COL6A2-201ENST00000300527 RGMAQ96B86 450 aa13.65□□□□□ -0.23
COL6A2-201ENST00000300527 ZMYND19Q96E35 227 aaPredicted RBP13.65□□□□□ -0.23
COL6A2-201ENST00000300527 OR1F2PQ96R84 312 aa13.65□□□□□ -0.23
COL6A2-201ENST00000300527 GAL3ST1Q99999 423 aa13.65□□□□□ -0.23
COL6A2-201ENST00000300527 MS4A8Q9BY19 250 aa13.65□□□□□ -0.23
COL6A2-201ENST00000300527 NOX3Q9HBY0 568 aa13.65□□□□□ -0.23
COL6A2-201ENST00000300527 TM7SF3Q9NS93 570 aa13.65□□□□□ -0.23
COL6A2-201ENST00000300527 PTTG3PQ9NZH4 202 aa13.65□□□□□ -0.23
COL6A2-201ENST00000300527 LEFTY2O00292 366 aa13.64□□□□□ -0.23
COL6A2-201ENST00000300527 LCMT2O60294 686 aaKnown RBP13.64□□□□□ -0.23
COL6A2-201ENST00000300527 TBX6O95947 436 aaPredicted RBP13.64□□□□□ -0.23
COL6A2-201ENST00000300527 PSMB1P20618 241 aaKnown RBP13.64□□□□□ -0.23
COL6A2-201ENST00000300527 C4BPBP20851 252 aa13.64□□□□□ -0.23
COL6A2-201ENST00000300527 PCBP4P57723 403 aaKnown RBP13.64□□□□□ -0.23
COL6A2-201ENST00000300527 FAM46CQ5VWP2 391 aa13.64□□□□□ -0.23
COL6A2-201ENST00000300527 ELP2Q6IA86 826 aa13.64□□□□□ -0.23
COL6A2-201ENST00000300527 MEPCEQ7L2J0 689 aaKnown RBP13.64□□□□□ -0.23
COL6A2-201ENST00000300527 SLC44A3Q8N4M1 653 aa13.64□□□□□ -0.23
COL6A2-201ENST00000300527 ZNF454Q8N9F8 522 aa13.64□□□□□ -0.23
COL6A2-201ENST00000300527 OR52H1Q8NGJ2 320 aa13.64□□□□□ -0.23
COL6A2-201ENST00000300527 C1orf216Q8TAB5 229 aa13.64□□□□□ -0.23
COL6A2-201ENST00000300527 ACOT11Q8WXI4 607 aaPredicted RBP13.64□□□□□ -0.23
COL6A2-201ENST00000300527 TFGQ92734 400 aaPredicted RBP13.64□□□□□ -0.23
COL6A2-201ENST00000300527 VOPP1Q96AW1 172 aa13.64□□□□□ -0.23
COL6A2-201ENST00000300527 UBL7Q96S82 380 aaPredicted RBP13.64□□□□□ -0.23
COL6A2-201ENST00000300527 ZNF649Q9BS31 505 aa13.64□□□□□ -0.23
COL6A2-201ENST00000300527 KLHL31Q9H511 634 aa13.64□□□□□ -0.23
COL6A2-201ENST00000300527 RP2O75695 350 aa13.64□□□□□ -0.23
COL6A2-201ENST00000300527 TPPPO94811 219 aa13.64□□□□□ -0.23
COL6A2-201ENST00000300527 STX4Q12846 297 aa13.64□□□□□ -0.23
COL6A2-201ENST00000300527 FAM74A1Q5RGS3 127 aa13.64□□□□□ -0.23
COL6A2-201ENST00000300527 C6orf132Q5T0Z8 1188 aa13.64□□□□□ -0.23
COL6A2-201ENST00000300527 CMTM4Q8IZR5 234 aa13.64□□□□□ -0.23
COL6A2-201ENST00000300527 VN1R2Q8NFZ6 395 aa13.64□□□□□ -0.23
COL6A2-201ENST00000300527 GRHL3Q8TE85 626 aa13.64□□□□□ -0.23
COL6A2-201ENST00000300527 CAMK1GQ96NX5 476 aa13.64□□□□□ -0.23
COL6A2-201ENST00000300527 GPR174Q9BXC1 333 aa13.64□□□□□ -0.23
COL6A2-201ENST00000300527 HRASLSQ9HDD0 168 aa13.64□□□□□ -0.23
COL6A2-201ENST00000300527 USP36Q9P275 1121 aaKnown RBP13.64□□□□□ -0.23
COL6A2-201ENST00000300527 COPZ2Q9P299 210 aa13.64□□□□□ -0.23
COL6A2-201ENST00000300527 INSL5Q9Y5Q6 135 aa13.64□□□□□ -0.23
COL6A2-201ENST00000300527 MEIS3P1A6NDR6 274 aa13.63□□□□□ -0.23
COL6A2-201ENST00000300527 ACOD1A6NK06 481 aa13.63□□□□□ -0.23
COL6A2-201ENST00000300527 FZD5Q13467 585 aa13.63□□□□□ -0.23
COL6A2-201ENST00000300527 HSD17B12Q53GQ0 312 aa13.63□□□□□ -0.23
COL6A2-201ENST00000300527 SLC22A10Q63ZE4 541 aa13.63□□□□□ -0.23
COL6A2-201ENST00000300527 NIPAL3Q6P499 406 aa13.63□□□□□ -0.23
COL6A2-201ENST00000300527 SSX6Q7RTT6 188 aa13.63□□□□□ -0.23
COL6A2-201ENST00000300527 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.63□□□□□ -0.23
COL6A2-201ENST00000300527 METTL3Q86U44 580 aaKnown RBP13.63□□□□□ -0.23
COL6A2-201ENST00000300527 OR13C2Q8NGS9 318 aa13.63□□□□□ -0.23
COL6A2-201ENST00000300527 ADAMTS15Q8TE58 950 aa13.63□□□□□ -0.23
COL6A2-201ENST00000300527 OTUB2Q96DC9 234 aa13.63□□□□□ -0.23
COL6A2-201ENST00000300527 OR7D2Q96RA2 312 aa13.63□□□□□ -0.23
COL6A2-201ENST00000300527 NTMQ9P121 344 aa13.63□□□□□ -0.23
COL6A2-201ENST00000300527 HS3ST2Q9Y278 367 aa13.63□□□□□ -0.23
COL6A2-201ENST00000300527 IGHA1P01876 353 aa13.63□□□□□ -0.23
COL6A2-201ENST00000300527 NMBP08949 121 aa13.63□□□□□ -0.23
COL6A2-201ENST00000300527 HOXB3P14651 431 aaPredicted RBP13.63□□□□□ -0.23
COL6A2-201ENST00000300527 STAT5AP42229 794 aa13.63□□□□□ -0.23
COL6A2-201ENST00000300527 CCR9P51686 369 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms