RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 ABRACLQ9P1F3 81 aa14□□□□□ -0.17
SCN3B-201ENST00000299333 ANGPTL7O43827 346 aa14□□□□□ -0.17
SCN3B-201ENST00000299333 DUSP11O75319 330 aaKnown RBP14□□□□□ -0.17
SCN3B-201ENST00000299333 NDUFB2O95178 105 aa14□□□□□ -0.17
SCN3B-201ENST00000299333 SIX6O95475 246 aa14□□□□□ -0.17
SCN3B-201ENST00000299333 TYRP14679 529 aa14□□□□□ -0.17
SCN3B-201ENST00000299333 TAS2R30P59541 319 aa14□□□□□ -0.17
SCN3B-201ENST00000299333 ERVK-16P61578 105 aa14□□□□□ -0.17
SCN3B-201ENST00000299333 ADARB1P78563 741 aaKnown RBP14□□□□□ -0.17
SCN3B-201ENST00000299333 BAGE3Q86Y29 109 aa14□□□□□ -0.17
SCN3B-201ENST00000299333 BAGE2Q86Y30 109 aa14□□□□□ -0.17
SCN3B-201ENST00000299333 CMIPQ8IY22 773 aa14□□□□□ -0.17
SCN3B-201ENST00000299333 ADAMTS14Q8WXS8 1223 aa14□□□□□ -0.17
SCN3B-201ENST00000299333 MUL1Q969V5 352 aa14□□□□□ -0.17
SCN3B-201ENST00000299333 FUBP1Q96AE4 644 aaKnown RBP14□□□□□ -0.17
SCN3B-201ENST00000299333 SENP5Q96HI0 755 aaPredicted RBP14□□□□□ -0.17
SCN3B-201ENST00000299333 KCNK13Q9HB14 408 aa14□□□□□ -0.17
SCN3B-201ENST00000299333 FBXO7Q9Y3I1 522 aa14□□□□□ -0.17
SCN3B-201ENST00000299333 PCDHA9Q9Y5H5 950 aa14□□□□□ -0.17
SCN3B-201ENST00000299333 WNT6Q9Y6F9 365 aa14□□□□□ -0.17
SCN3B-201ENST00000299333 NPIPA5A0A0B4J1W7 369 aa14□□□□□ -0.17
SCN3B-201ENST00000299333 SURF4O15260 269 aa14□□□□□ -0.17
SCN3B-201ENST00000299333 FOXA1P55317 472 aa14□□□□□ -0.17
SCN3B-201ENST00000299333 PLA2G7Q13093 441 aa14□□□□□ -0.17
SCN3B-201ENST00000299333 FAM185AQ8N0U4 392 aa14□□□□□ -0.17
SCN3B-201ENST00000299333 BPIFB2Q8N4F0 458 aa14□□□□□ -0.17
SCN3B-201ENST00000299333 RAB39BQ96DA2 213 aa14□□□□□ -0.17
SCN3B-201ENST00000299333 INTS14Q96SY0 518 aa14□□□□□ -0.17
SCN3B-201ENST00000299333 MTHFD2LQ9H903 347 aaPredicted RBP14□□□□□ -0.17
SCN3B-201ENST00000299333 C11orf97A0A1B0GVM6 126 aaPredicted RBP14□□□□□ -0.17
SCN3B-201ENST00000299333 DFFBO76075 338 aa14□□□□□ -0.17
SCN3B-201ENST00000299333 GM2AP17900 193 aa14□□□□□ -0.17
SCN3B-201ENST00000299333 CYS1Q717R9 158 aa14□□□□□ -0.17
SCN3B-201ENST00000299333 GLB1L2Q8IW92 636 aa14□□□□□ -0.17
SCN3B-201ENST00000299333 IL17RCQ8NAC3 791 aa14□□□□□ -0.17
SCN3B-201ENST00000299333 OR10R2Q8NGX6 335 aa14□□□□□ -0.17
SCN3B-201ENST00000299333 ZNF768Q9H5H4 540 aaKnown RBP14□□□□□ -0.17
SCN3B-201ENST00000299333 ZNF891A8MT65 544 aaPredicted RBP13.99□□□□□ -0.17
SCN3B-201ENST00000299333 DLX2Q07687 328 aaPredicted RBP13.99□□□□□ -0.17
SCN3B-201ENST00000299333 HMGN3Q15651 99 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 OR52W1Q6IF63 320 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 CNKSR3Q6P9H4 555 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 TSTD1Q8NFU3 115 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 OR4M1Q8NGD0 313 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 CA5BP1Q8WTZ4 195 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 RBMXL1Q96E39 390 aaKnown RBP13.99□□□□□ -0.17
SCN3B-201ENST00000299333 TAS2R16Q9NYV7 291 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 VAPAQ9P0L0 249 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 IER3IP1Q9Y5U9 82 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 TCRBV3S1A0A5B6 114 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 FRS3O43559 492 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 CIDEAO60543 219 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 AK1P00568 194 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 TBCEQ15813 527 aaPredicted RBP13.99□□□□□ -0.17
SCN3B-201ENST00000299333 RAET1LQ5VY80 246 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 SIAH1Q8IUQ4 282 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 FAM213BQ8TBF2 198 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 ARNTL2Q8WYA1 636 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 TXLNGYQ9BZA5 131 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 SAP130Q9H0E3 1048 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 LILRB3O75022 631 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 TOX4O94842 621 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 INCA1Q0VD86 236 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 UPP1Q16831 310 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 FAM110CQ1W6H9 321 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 DAZAP1Q96EP5 407 aaKnown RBP13.99□□□□□ -0.17
SCN3B-201ENST00000299333 SORT1Q99523 831 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 OR11A1Q9GZK7 315 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 NXF5Q9H1B4 397 aaKnown RBP13.99□□□□□ -0.17
SCN3B-201ENST00000299333 CNOT2Q9NZN8 540 aaKnown RBP13.99□□□□□ -0.17
SCN3B-201ENST00000299333 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.99□□□□□ -0.17
SCN3B-201ENST00000299333 FZD7O75084 574 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 SCAF4O95104 1147 aaKnown RBP13.99□□□□□ -0.17
SCN3B-201ENST00000299333 GYPBP06028 91 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 PRSS56P0CW18 603 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 CXCR4P61073 352 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 LTBQ06643 244 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 ARHGAP1Q07960 439 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 SCAPQ12770 1279 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 GRM2Q14416 872 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 FCN2Q15485 313 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 LETMD1Q6P1Q0 360 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 FAM122BQ7Z309 247 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 COMMD6Q7Z4G1 85 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 MFSD6LQ8IWD5 586 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 TM9SF4Q92544 642 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 DPH7Q9BTV6 452 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 CWH43Q9H720 699 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 GALNT9Q9HCQ5 603 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 SLC22A23A1A5C7 686 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 GABRPO00591 440 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 TP53I11O14683 189 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 P2RX6O15547 441 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 DPM1O60762 260 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 LEFTY1O75610 366 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 RPP30P78346 268 aaKnown RBP13.99□□□□□ -0.17
SCN3B-201ENST00000299333 SIM1P81133 766 aaPredicted RBP13.99□□□□□ -0.17
SCN3B-201ENST00000299333 MLLT11Q13015 90 aaPredicted RBP13.99□□□□□ -0.17
SCN3B-201ENST00000299333 CCINQ13939 588 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 UBXN2BQ14CS0 331 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms