RNA–Protein interactions for RNA: ENST00000297615.9

TTC39B-201, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-201ENST00000297615 ACTRT3Q9BYD9 372 aa12.56□□□□□ -0.4
TTC39B-201ENST00000297615 HDHD2Q9H0R4 259 aa12.56□□□□□ -0.4
TTC39B-201ENST00000297615 PLEKHB1Q9UF11 243 aaPredicted RBP12.56□□□□□ -0.4
TTC39B-201ENST00000297615 GRIP1Q9Y3R0 1128 aa12.56□□□□□ -0.4
TTC39B-201ENST00000297615 CNOT1A5YKK6 2376 aaKnown RBP12.56□□□□□ -0.4
TTC39B-201ENST00000297615 CXorf51AA0A1B0GTR3 108 aa12.56□□□□□ -0.4
TTC39B-201ENST00000297615 SHISA3A0PJX4 238 aa12.56□□□□□ -0.4
TTC39B-201ENST00000297615 CHST10O43529 356 aa12.56□□□□□ -0.4
TTC39B-201ENST00000297615 CSF3P09919 207 aa12.56□□□□□ -0.4
TTC39B-201ENST00000297615 MAKP20794 623 aa12.56□□□□□ -0.4
TTC39B-201ENST00000297615 HTR3AP46098 478 aa12.56□□□□□ -0.4
TTC39B-201ENST00000297615 BNC1Q01954 994 aa12.56□□□□□ -0.4
TTC39B-201ENST00000297615 ST3GAL3Q11203 375 aa12.56□□□□□ -0.4
TTC39B-201ENST00000297615 KLHL22Q53GT1 634 aa12.56□□□□□ -0.4
TTC39B-201ENST00000297615 MRM1Q6IN84 353 aaKnown RBP12.56□□□□□ -0.4
TTC39B-201ENST00000297615 C1orf94Q6P1W5 598 aa12.56□□□□□ -0.4
TTC39B-201ENST00000297615 THSD4Q6ZMP0 1018 aa12.56□□□□□ -0.4
TTC39B-201ENST00000297615 PEX5LQ8IYB4 626 aa12.56□□□□□ -0.4
TTC39B-201ENST00000297615 FAM26EQ8N5C1 309 aa12.56□□□□□ -0.4
TTC39B-201ENST00000297615 ZNF655Q8N720 491 aaPredicted RBP12.56□□□□□ -0.4
TTC39B-201ENST00000297615 OR13C5Q8NGS8 318 aa12.56□□□□□ -0.4
TTC39B-201ENST00000297615 TMCO6Q96DC7 493 aa12.56□□□□□ -0.4
TTC39B-201ENST00000297615 LMAN1LQ9HAT1 526 aa12.56□□□□□ -0.4
TTC39B-201ENST00000297615 TRPV4Q9HBA0 871 aa12.56□□□□□ -0.4
TTC39B-201ENST00000297615 DIMT1Q9UNQ2 313 aaKnown RBP12.56□□□□□ -0.4
TTC39B-201ENST00000297615 GSTK1Q9Y2Q3 226 aa12.56□□□□□ -0.4
TTC39B-201ENST00000297615 TICRRQ7Z2Z1 1910 aa12.55□□□□□ -0.4
TTC39B-201ENST00000297615 RFPL3O75679 317 aa12.55□□□□□ -0.4
TTC39B-201ENST00000297615 TNFP01375 233 aa12.55□□□□□ -0.4
TTC39B-201ENST00000297615 SLC2A2P11168 524 aaPredicted RBP12.55□□□□□ -0.4
TTC39B-201ENST00000297615 SLC1A3P43003 542 aa12.55□□□□□ -0.4
TTC39B-201ENST00000297615 SNRPD2P62316 118 aaKnown RBP12.55□□□□□ -0.4
TTC39B-201ENST00000297615 TMEM35AQ53FP2 167 aa12.55□□□□□ -0.4
TTC39B-201ENST00000297615 OOSP2Q86WS3 158 aa12.55□□□□□ -0.4
TTC39B-201ENST00000297615 Q8N402 240 aa12.55□□□□□ -0.4
TTC39B-201ENST00000297615 ZDHHC1Q8WTX9 485 aa12.55□□□□□ -0.4
TTC39B-201ENST00000297615 SLC25A46Q96AG3 418 aa12.55□□□□□ -0.4
TTC39B-201ENST00000297615 SRRQ9GZT4 340 aa12.55□□□□□ -0.4
TTC39B-201ENST00000297615 HINT3Q9NQE9 182 aaKnown RBP12.55□□□□□ -0.4
TTC39B-201ENST00000297615 UCKL1Q9NWZ5 548 aa12.55□□□□□ -0.4
TTC39B-201ENST00000297615 LRIT1Q9P2V4 623 aa12.55□□□□□ -0.4
TTC39B-201ENST00000297615 CENPXA8MT69 81 aa12.55□□□□□ -0.4
TTC39B-201ENST00000297615 C12orf71A8MTZ7 269 aa12.55□□□□□ -0.4
TTC39B-201ENST00000297615 DOK2O60496 412 aa12.55□□□□□ -0.4
TTC39B-201ENST00000297615 TSC22D2O75157 780 aa12.55□□□□□ -0.4
TTC39B-201ENST00000297615 GUCY1B2O75343 617 aa12.55□□□□□ -0.4
TTC39B-201ENST00000297615 IGHV4-34P06331 123 aa12.55□□□□□ -0.4
TTC39B-201ENST00000297615 EMDP50402 254 aa12.55□□□□□ -0.4
TTC39B-201ENST00000297615 IFITM2Q01629 132 aa12.55□□□□□ -0.4
TTC39B-201ENST00000297615 EIF2B5Q13144 721 aaKnown RBP12.55□□□□□ -0.4
TTC39B-201ENST00000297615 GAS6Q14393 721 aa12.55□□□□□ -0.4
TTC39B-201ENST00000297615 CCDC157Q569K6 752 aa12.55□□□□□ -0.4
TTC39B-201ENST00000297615 CHRDL2Q6WN34 429 aa12.55□□□□□ -0.4
TTC39B-201ENST00000297615 SIRT6Q8N6T7 355 aa12.55□□□□□ -0.4
TTC39B-201ENST00000297615 TTLQ8NG68 377 aa12.55□□□□□ -0.4
TTC39B-201ENST00000297615 OR56A1Q8NGH5 318 aa12.55□□□□□ -0.4
TTC39B-201ENST00000297615 OR4K13Q8NH42 304 aa12.55□□□□□ -0.4
TTC39B-201ENST00000297615 C10orf90Q96M02 699 aa12.55□□□□□ -0.4
TTC39B-201ENST00000297615 OR8D2Q9GZM6 311 aa12.55□□□□□ -0.4
TTC39B-201ENST00000297615 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.54□□□□□ -0.4
TTC39B-201ENST00000297615 A0A0G2JPF8 293 aa12.54□□□□□ -0.4
TTC39B-201ENST00000297615 HNRNPCL2B2RXH8 293 aa12.54□□□□□ -0.4
TTC39B-201ENST00000297615 HNRNPCL3B7ZW38 293 aa12.54□□□□□ -0.4
TTC39B-201ENST00000297615 PLOD3O60568 738 aa12.54□□□□□ -0.4
TTC39B-201ENST00000297615 OPN1LWP04000 364 aa12.54□□□□□ -0.4
TTC39B-201ENST00000297615 HNRNPCL4P0DMR1 293 aa12.54□□□□□ -0.4
TTC39B-201ENST00000297615 PIPP12273 146 aaPredicted RBP12.54□□□□□ -0.4
TTC39B-201ENST00000297615 HTR2AP28223 471 aa12.54□□□□□ -0.4
TTC39B-201ENST00000297615 TNFRSF4P43489 277 aa12.54□□□□□ -0.4
TTC39B-201ENST00000297615 ANXA11P50995 505 aaKnown RBP12.54□□□□□ -0.4
TTC39B-201ENST00000297615 CDK5Q00535 292 aa12.54□□□□□ -0.4
TTC39B-201ENST00000297615 TNFRSF17Q02223 184 aa12.54□□□□□ -0.4
TTC39B-201ENST00000297615 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.54□□□□□ -0.4
TTC39B-201ENST00000297615 CCDC92Q53HC0 331 aaPredicted RBP12.54□□□□□ -0.4
TTC39B-201ENST00000297615 DCST2Q5T1A1 773 aa12.54□□□□□ -0.4
TTC39B-201ENST00000297615 TTLL10Q6ZVT0 673 aa12.54□□□□□ -0.4
TTC39B-201ENST00000297615 RTL10Q7L3V2 364 aa12.54□□□□□ -0.4
TTC39B-201ENST00000297615 PIGKQ92643 395 aa12.54□□□□□ -0.4
TTC39B-201ENST00000297615 SLC35B4Q969S0 331 aa12.54□□□□□ -0.4
TTC39B-201ENST00000297615 GIMAP5Q96F15 307 aa12.54□□□□□ -0.4
TTC39B-201ENST00000297615 NDEL1Q9GZM8 345 aa12.54□□□□□ -0.4
TTC39B-201ENST00000297615 TNFRSF10DQ9UBN6 386 aa12.54□□□□□ -0.4
TTC39B-201ENST00000297615 ERVK-19Q9WJR5 959 aa12.54□□□□□ -0.4
TTC39B-201ENST00000297615 ZNF443Q9Y2A4 671 aaPredicted RBP12.54□□□□□ -0.4
TTC39B-201ENST00000297615 TMEM184BQ9Y519 407 aaPredicted RBP12.54□□□□□ -0.4
TTC39B-201ENST00000297615 A0A1B0GVT2 93 aa12.54□□□□□ -0.4
TTC39B-201ENST00000297615 PAHP00439 452 aa12.54□□□□□ -0.4
TTC39B-201ENST00000297615 TBXA2RP21731 343 aa12.54□□□□□ -0.4
TTC39B-201ENST00000297615 COX10Q12887 443 aa12.54□□□□□ -0.4
TTC39B-201ENST00000297615 OCLNQ16625 522 aa12.54□□□□□ -0.4
TTC39B-201ENST00000297615 ZNF544Q6NX49 715 aa12.54□□□□□ -0.4
TTC39B-201ENST00000297615 KRT74Q7RTS7 529 aa12.54□□□□□ -0.4
TTC39B-201ENST00000297615 GNPDA2Q8TDQ7 276 aa12.54□□□□□ -0.4
TTC39B-201ENST00000297615 KLHDC7BQ96G42 594 aa12.54□□□□□ -0.4
TTC39B-201ENST00000297615 SLC38A3Q99624 504 aa12.54□□□□□ -0.4
TTC39B-201ENST00000297615 SPRTNQ9H040 489 aaPredicted RBP12.54□□□□□ -0.4
TTC39B-201ENST00000297615 FLRT3Q9NZU0 649 aa12.54□□□□□ -0.4
TTC39B-201ENST00000297615 ADAM18Q9Y3Q7 739 aa12.54□□□□□ -0.4
TTC39B-201ENST00000297615 A0A0B4J203 849 aa12.53□□□□□ -0.4
TTC39B-201ENST00000297615 IGHV3-20A0A0C4DH32 117 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms