RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 ACKR1Q16570 336 aa22.52■■□□□ 1.2
U2AF1-201ENST00000291552 WDR93Q6P2C0 686 aa22.52■■□□□ 1.2
U2AF1-201ENST00000291552 CLECL1Q8IZS7 167 aa22.52■■□□□ 1.2
U2AF1-201ENST00000291552 CLEC4FQ8N1N0 589 aa22.52■■□□□ 1.2
U2AF1-201ENST00000291552 GPR119Q8TDV5 335 aa22.52■■□□□ 1.2
U2AF1-201ENST00000291552 ABHD3Q8WU67 409 aa22.52■■□□□ 1.2
U2AF1-201ENST00000291552 GLRX2Q9NS18 164 aa22.52■■□□□ 1.2
U2AF1-201ENST00000291552 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.52■■□□□ 1.2
U2AF1-201ENST00000291552 V9GYY5 206 aaPredicted RBP22.52■■□□□ 1.2
U2AF1-201ENST00000291552 CADP27708 2225 aa22.51■■□□□ 1.19
U2AF1-201ENST00000291552 CENPVL1A0A0U1RR11 272 aa22.51■■□□□ 1.19
U2AF1-201ENST00000291552 TUBBP07437 444 aa22.51■■□□□ 1.19
U2AF1-201ENST00000291552 KRT16P08779 473 aa22.51■■□□□ 1.19
U2AF1-201ENST00000291552 SOAT1P35610 550 aa22.51■■□□□ 1.19
U2AF1-201ENST00000291552 SUMO3P55854 103 aaPredicted RBP22.51■■□□□ 1.19
U2AF1-201ENST00000291552 CLDN8P56748 225 aa22.51■■□□□ 1.19
U2AF1-201ENST00000291552 CARD18P57730 90 aa22.51■■□□□ 1.19
U2AF1-201ENST00000291552 ZNF844Q08AG5 666 aa22.51■■□□□ 1.19
U2AF1-201ENST00000291552 PDCD2Q16342 344 aaPredicted RBP22.51■■□□□ 1.19
U2AF1-201ENST00000291552 Q5PR19 223 aa22.51■■□□□ 1.19
U2AF1-201ENST00000291552 SHEQ5VZ18 495 aa22.51■■□□□ 1.19
U2AF1-201ENST00000291552 OR4F3Q6IEY1 312 aa22.51■■□□□ 1.19
U2AF1-201ENST00000291552 OLIG3Q7RTU3 272 aa22.51■■□□□ 1.19
U2AF1-201ENST00000291552 NUDCD3Q8IVD9 361 aa22.51■■□□□ 1.19
U2AF1-201ENST00000291552 ZNF781Q8N8C0 355 aa22.51■■□□□ 1.19
U2AF1-201ENST00000291552 ZNF527Q8NB42 609 aa22.51■■□□□ 1.19
U2AF1-201ENST00000291552 PPP1R14CQ8TAE6 165 aa22.51■■□□□ 1.19
U2AF1-201ENST00000291552 MOAP1Q96BY2 351 aa22.51■■□□□ 1.19
U2AF1-201ENST00000291552 ARSGQ96EG1 525 aa22.51■■□□□ 1.19
U2AF1-201ENST00000291552 PRPF18Q99633 342 aaKnown RBP22.51■■□□□ 1.19
U2AF1-201ENST00000291552 C20orf27Q9GZN8 174 aa22.51■■□□□ 1.19
U2AF1-201ENST00000291552 HOXD1Q9GZZ0 328 aa22.51■■□□□ 1.19
U2AF1-201ENST00000291552 C12orf49Q9H741 205 aa22.51■■□□□ 1.19
U2AF1-201ENST00000291552 KCNE5Q9UJ90 142 aa22.51■■□□□ 1.19
U2AF1-201ENST00000291552 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP22.5■■□□□ 1.19
U2AF1-201ENST00000291552 ESPNB1AK53 854 aa22.5■■□□□ 1.19
U2AF1-201ENST00000291552 ZNF195O14628 629 aa22.5■■□□□ 1.19
U2AF1-201ENST00000291552 CFLARO15519 480 aa22.5■■□□□ 1.19
U2AF1-201ENST00000291552 PRKCAP17252 672 aa22.5■■□□□ 1.19
U2AF1-201ENST00000291552 PGS1Q32NB8 556 aa22.5■■□□□ 1.19
U2AF1-201ENST00000291552 MREGQ8N565 214 aa22.5■■□□□ 1.19
U2AF1-201ENST00000291552 C18orf12Q96KH6 178 aa22.5■■□□□ 1.19
U2AF1-201ENST00000291552 PPP1R36Q96LQ0 422 aa22.5■■□□□ 1.19
U2AF1-201ENST00000291552 SDF2Q99470 211 aa22.5■■□□□ 1.19
U2AF1-201ENST00000291552 DTNAQ9Y4J8 743 aa22.5■■□□□ 1.19
U2AF1-201ENST00000291552 GPC6Q9Y625 555 aaPredicted RBP22.5■■□□□ 1.19
U2AF1-201ENST00000291552 WDR91A4D1P6 747 aa22.49■■□□□ 1.19
U2AF1-201ENST00000291552 NUDT14O95848 222 aa22.49■■□□□ 1.19
U2AF1-201ENST00000291552 SERPINE1P05121 402 aa22.49■■□□□ 1.19
U2AF1-201ENST00000291552 ADH6P28332 368 aa22.49■■□□□ 1.19
U2AF1-201ENST00000291552 CHI3L2Q15782 390 aa22.49■■□□□ 1.19
U2AF1-201ENST00000291552 KRT71Q3SY84 523 aa22.49■■□□□ 1.19
U2AF1-201ENST00000291552 PDSS1Q5T2R2 415 aa22.49■■□□□ 1.19
U2AF1-201ENST00000291552 PDZK1Q5T2W1 519 aa22.49■■□□□ 1.19
U2AF1-201ENST00000291552 NUFIP2Q7Z417 695 aaKnown RBP22.49■■□□□ 1.19
U2AF1-201ENST00000291552 BIVMQ86UB2 503 aa22.49■■□□□ 1.19
U2AF1-201ENST00000291552 LRRC75A-AS1Q8N1F1 130 aa22.49■■□□□ 1.19
U2AF1-201ENST00000291552 ZNF614Q8N883 585 aa22.49■■□□□ 1.19
U2AF1-201ENST00000291552 IGFBPL1Q8WX77 278 aa22.49■■□□□ 1.19
U2AF1-201ENST00000291552 SORT1Q99523 831 aa22.49■■□□□ 1.19
U2AF1-201ENST00000291552 CCL19Q99731 98 aa22.49■■□□□ 1.19
U2AF1-201ENST00000291552 AKTIPQ9H8T0 292 aa22.49■■□□□ 1.19
U2AF1-201ENST00000291552 NOP53Q9NZM5 478 aaKnown RBP22.49■■□□□ 1.19
U2AF1-201ENST00000291552 UQCRHLA0A096LP55 91 aa22.48■■□□□ 1.19
U2AF1-201ENST00000291552 ETV2O00321 342 aaPredicted RBP22.48■■□□□ 1.19
U2AF1-201ENST00000291552 SMPD2O60906 423 aa22.48■■□□□ 1.19
U2AF1-201ENST00000291552 SCN2BO60939 215 aa22.48■■□□□ 1.19
U2AF1-201ENST00000291552 DHRS4L1P0CG22 281 aa22.48■■□□□ 1.19
U2AF1-201ENST00000291552 PPP3CBP16298 524 aa22.48■■□□□ 1.19
U2AF1-201ENST00000291552 MAD2L1Q13257 205 aaPredicted RBP22.48■■□□□ 1.19
U2AF1-201ENST00000291552 SMU1Q2TAY7 513 aa22.48■■□□□ 1.19
U2AF1-201ENST00000291552 TMEM176BQ3YBM2 270 aaPredicted RBP22.48■■□□□ 1.19
U2AF1-201ENST00000291552 SLC25A53Q5H9E4 307 aa22.48■■□□□ 1.19
U2AF1-201ENST00000291552 BEX5Q5H9J7 111 aa22.48■■□□□ 1.19
U2AF1-201ENST00000291552 TFAP2EQ6VUC0 442 aa22.48■■□□□ 1.19
U2AF1-201ENST00000291552 BEND4Q6ZU67 534 aa22.48■■□□□ 1.19
U2AF1-201ENST00000291552 C6orf120Q7Z4R8 191 aa22.48■■□□□ 1.19
U2AF1-201ENST00000291552 PIGTQ969N2 578 aa22.48■■□□□ 1.19
U2AF1-201ENST00000291552 CPNE4Q96A23 557 aaPredicted RBP22.48■■□□□ 1.19
U2AF1-201ENST00000291552 ZIM3Q96PE6 472 aa22.48■■□□□ 1.19
U2AF1-201ENST00000291552 ACTR6Q9GZN1 396 aa22.48■■□□□ 1.19
U2AF1-201ENST00000291552 NMUR2Q9GZQ4 415 aa22.48■■□□□ 1.19
U2AF1-201ENST00000291552 CSPG4Q6UVK1 2322 aa22.48■■□□□ 1.19
U2AF1-201ENST00000291552 RNF103-CHMP3A0A140T963 221 aa22.47■■□□□ 1.19
U2AF1-201ENST00000291552 H3BNH8 94 aa22.47■■□□□ 1.19
U2AF1-201ENST00000291552 GTPBP1O00178 669 aaKnown RBP22.47■■□□□ 1.19
U2AF1-201ENST00000291552 FCMRO60667 390 aa22.47■■□□□ 1.19
U2AF1-201ENST00000291552 GCM2O75603 506 aaPredicted RBP22.47■■□□□ 1.19
U2AF1-201ENST00000291552 SOX30O94993 753 aa22.47■■□□□ 1.19
U2AF1-201ENST00000291552 PLAUP00749 431 aa22.47■■□□□ 1.19
U2AF1-201ENST00000291552 INHBBP09529 407 aa22.47■■□□□ 1.19
U2AF1-201ENST00000291552 PSMB1P20618 241 aaKnown RBP22.47■■□□□ 1.19
U2AF1-201ENST00000291552 FPR1P21462 350 aa22.47■■□□□ 1.19
U2AF1-201ENST00000291552 ABCE1P61221 599 aaKnown RBP22.47■■□□□ 1.19
U2AF1-201ENST00000291552 PHC1P78364 1004 aa22.47■■□□□ 1.19
U2AF1-201ENST00000291552 SKP2Q13309 424 aa22.47■■□□□ 1.19
U2AF1-201ENST00000291552 C20orf204Q6ZNR8 217 aa22.47■■□□□ 1.19
U2AF1-201ENST00000291552 Q71RC1 249 aaPredicted RBP22.47■■□□□ 1.19
U2AF1-201ENST00000291552 ATP6V1C2Q8NEY4 427 aa22.47■■□□□ 1.19
U2AF1-201ENST00000291552 OR5W2Q8NH69 310 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms