RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 CLDN22Q8N7P3 220 aa20.28■□□□□ 0.84
CCDC7-201ENST00000277657 TEX47Q8TBZ9 253 aa20.28■□□□□ 0.84
CCDC7-201ENST00000277657 GRHL3Q8TE85 626 aa20.28■□□□□ 0.84
CCDC7-201ENST00000277657 GGHQ92820 318 aa20.28■□□□□ 0.84
CCDC7-201ENST00000277657 MUL1Q969V5 352 aa20.28■□□□□ 0.84
CCDC7-201ENST00000277657 MPP4Q96JB8 637 aa20.28■□□□□ 0.84
CCDC7-201ENST00000277657 WDR77Q9BQA1 342 aaPredicted RBP20.28■□□□□ 0.84
CCDC7-201ENST00000277657 POLDIP3Q9BY77 421 aaKnown RBP20.28■□□□□ 0.84
CCDC7-201ENST00000277657 CLN6Q9NWW5 311 aa20.28■□□□□ 0.84
CCDC7-201ENST00000277657 CDC14CA4D256 554 aa20.27■□□□□ 0.84
CCDC7-201ENST00000277657 B4E171 279 aa20.27■□□□□ 0.84
CCDC7-201ENST00000277657 SCDO00767 359 aa20.27■□□□□ 0.84
CCDC7-201ENST00000277657 CDC42EP2O14613 210 aa20.27■□□□□ 0.84
CCDC7-201ENST00000277657 MT-ND2P03891 347 aa20.27■□□□□ 0.84
CCDC7-201ENST00000277657 TSPAN7P41732 249 aa20.27■□□□□ 0.84
CCDC7-201ENST00000277657 EFNB1P98172 346 aa20.27■□□□□ 0.84
CCDC7-201ENST00000277657 TUBA3CQ13748 450 aa20.27■□□□□ 0.84
CCDC7-201ENST00000277657 SF3A2Q15428 464 aaKnown RBP20.27■□□□□ 0.84
CCDC7-201ENST00000277657 CD226Q15762 336 aa20.27■□□□□ 0.84
CCDC7-201ENST00000277657 APOOLQ6UXV4 268 aa20.27■□□□□ 0.84
CCDC7-201ENST00000277657 LINC00114Q6XXX2 140 aa20.27■□□□□ 0.84
CCDC7-201ENST00000277657 ZNF620Q6ZNG0 422 aa20.27■□□□□ 0.84
CCDC7-201ENST00000277657 IL4I1Q96RQ9 567 aa20.27■□□□□ 0.84
CCDC7-201ENST00000277657 COPS4Q9BT78 406 aa20.27■□□□□ 0.84
CCDC7-201ENST00000277657 CRB3Q9BUF7 120 aa20.27■□□□□ 0.84
CCDC7-201ENST00000277657 LHPPQ9H008 270 aa20.27■□□□□ 0.84
CCDC7-201ENST00000277657 AMBNQ9NP70 447 aa20.27■□□□□ 0.84
CCDC7-201ENST00000277657 EXOSC3Q9NQT5 275 aaKnown RBP20.27■□□□□ 0.84
CCDC7-201ENST00000277657 RSL24D1Q9UHA3 163 aaKnown RBP20.27■□□□□ 0.84
CCDC7-201ENST00000277657 REM1O75628 298 aa20.26■□□□□ 0.83
CCDC7-201ENST00000277657 HPGDP15428 266 aa20.26■□□□□ 0.83
CCDC7-201ENST00000277657 RBM34P42696 430 aaKnown RBP20.26■□□□□ 0.83
CCDC7-201ENST00000277657 PCYT1AP49585 367 aa20.26■□□□□ 0.83
CCDC7-201ENST00000277657 NUDT6P53370 316 aa20.26■□□□□ 0.83
CCDC7-201ENST00000277657 CTBP2P56545 445 aa20.26■□□□□ 0.83
CCDC7-201ENST00000277657 RNF4P78317 190 aa20.26■□□□□ 0.83
CCDC7-201ENST00000277657 SLC25A30Q5SVS4 291 aa20.26■□□□□ 0.83
CCDC7-201ENST00000277657 SLC27A4Q6P1M0 643 aa20.26■□□□□ 0.83
CCDC7-201ENST00000277657 ULK3Q6PHR2 472 aa20.26■□□□□ 0.83
CCDC7-201ENST00000277657 KIRREL2Q6UWL6 708 aa20.26■□□□□ 0.83
CCDC7-201ENST00000277657 PFN4Q8NHR9 129 aa20.26■□□□□ 0.83
CCDC7-201ENST00000277657 FAR1Q8WVX9 515 aa20.26■□□□□ 0.83
CCDC7-201ENST00000277657 OSTF1Q92882 214 aa20.26■□□□□ 0.83
CCDC7-201ENST00000277657 FGF11Q92914 225 aa20.26■□□□□ 0.83
CCDC7-201ENST00000277657 PMEPA1Q969W9 287 aa20.26■□□□□ 0.83
CCDC7-201ENST00000277657 TP53INP1Q96A56 240 aa20.26■□□□□ 0.83
CCDC7-201ENST00000277657 C20orf141Q9NUB4 165 aa20.26■□□□□ 0.83
CCDC7-201ENST00000277657 NXT1Q9UKK6 140 aaKnown RBP20.26■□□□□ 0.83
CCDC7-201ENST00000277657 FAM86C2PA6NEL3 165 aa20.26■□□□□ 0.83
CCDC7-201ENST00000277657 ZNF701M0R085 212 aaPredicted RBP20.26■□□□□ 0.83
CCDC7-201ENST00000277657 CBFA2T3O75081 653 aa20.26■□□□□ 0.83
CCDC7-201ENST00000277657 ICOSLGO75144 302 aa20.26■□□□□ 0.83
CCDC7-201ENST00000277657 NGFRP08138 427 aa20.26■□□□□ 0.83
CCDC7-201ENST00000277657 UBL4AP11441 157 aa20.26■□□□□ 0.83
CCDC7-201ENST00000277657 PTNP21246 168 aa20.26■□□□□ 0.83
CCDC7-201ENST00000277657 ABCD3P28288 659 aa20.26■□□□□ 0.83
CCDC7-201ENST00000277657 IL12BP29460 328 aa20.26■□□□□ 0.83
CCDC7-201ENST00000277657 MASP1P48740 699 aa20.26■□□□□ 0.83
CCDC7-201ENST00000277657 PLCXD2Q0VAA5 305 aa20.26■□□□□ 0.83
CCDC7-201ENST00000277657 SKP2Q13309 424 aa20.26■□□□□ 0.83
CCDC7-201ENST00000277657 ALG10BQ5I7T1 473 aa20.26■□□□□ 0.83
CCDC7-201ENST00000277657 PAPD4Q6PIY7 484 aaKnown RBP20.26■□□□□ 0.83
CCDC7-201ENST00000277657 TMPRSS11FQ6ZWK6 438 aa20.26■□□□□ 0.83
CCDC7-201ENST00000277657 CPEB2Q7Z5Q1 589 aaKnown RBP20.26■□□□□ 0.83
CCDC7-201ENST00000277657 NAXDQ8IW45 347 aa20.26■□□□□ 0.83
CCDC7-201ENST00000277657 AMER2Q8N7J2 671 aa20.26■□□□□ 0.83
CCDC7-201ENST00000277657 MYDGFQ969H8 173 aa20.26■□□□□ 0.83
CCDC7-201ENST00000277657 OMA1Q96E52 524 aa20.26■□□□□ 0.83
CCDC7-201ENST00000277657 MEPEQ9NQ76 525 aaPredicted RBP20.26■□□□□ 0.83
CCDC7-201ENST00000277657 TVP23BQ9NYZ1 205 aa20.26■□□□□ 0.83
CCDC7-201ENST00000277657 TMEM5Q9Y2B1 443 aa20.26■□□□□ 0.83
CCDC7-201ENST00000277657 MED31Q9Y3C7 131 aa20.26■□□□□ 0.83
CCDC7-201ENST00000277657 CDH10Q9Y6N8 788 aa20.26■□□□□ 0.83
CCDC7-201ENST00000277657 HEATR5AQ86XA9 2040 aa20.26■□□□□ 0.83
CCDC7-201ENST00000277657 KLK3P07288 261 aaPredicted RBP20.25■□□□□ 0.83
CCDC7-201ENST00000277657 MAKP20794 623 aa20.25■□□□□ 0.83
CCDC7-201ENST00000277657 NUBP1P53384 320 aa20.25■□□□□ 0.83
CCDC7-201ENST00000277657 PNLIPRP2P54317 469 aa20.25■□□□□ 0.83
CCDC7-201ENST00000277657 MVKQ03426 396 aa20.25■□□□□ 0.83
CCDC7-201ENST00000277657 OCLNQ16625 522 aa20.25■□□□□ 0.83
CCDC7-201ENST00000277657 HSDL2Q6YN16 418 aa20.25■□□□□ 0.83
CCDC7-201ENST00000277657 ZNF517Q6ZMY9 492 aaPredicted RBP20.25■□□□□ 0.83
CCDC7-201ENST00000277657 CLVS1Q8IUQ0 354 aaPredicted RBP20.25■□□□□ 0.83
CCDC7-201ENST00000277657 SVOPQ8N4V2 548 aa20.25■□□□□ 0.83
CCDC7-201ENST00000277657 FAM26EQ8N5C1 309 aa20.25■□□□□ 0.83
CCDC7-201ENST00000277657 TCEANCQ8N8B7 351 aa20.25■□□□□ 0.83
CCDC7-201ENST00000277657 RNF217Q8TC41 542 aa20.25■□□□□ 0.83
CCDC7-201ENST00000277657 Q96MT0 163 aa20.25■□□□□ 0.83
CCDC7-201ENST00000277657 CMKLR1Q99788 373 aa20.25■□□□□ 0.83
CCDC7-201ENST00000277657 SLC39A1Q9NY26 324 aa20.25■□□□□ 0.83
CCDC7-201ENST00000277657 PRKYO43930 277 aa20.24■□□□□ 0.83
CCDC7-201ENST00000277657 ENTPD6O75354 484 aa20.24■□□□□ 0.83
CCDC7-201ENST00000277657 CDK1P06493 297 aa20.24■□□□□ 0.83
CCDC7-201ENST00000277657 IFI30P13284 250 aa20.24■□□□□ 0.83
CCDC7-201ENST00000277657 DCKP27707 260 aa20.24■□□□□ 0.83
CCDC7-201ENST00000277657 GSTT1P30711 240 aa20.24■□□□□ 0.83
CCDC7-201ENST00000277657 SLC15A1P46059 708 aa20.24■□□□□ 0.83
CCDC7-201ENST00000277657 DESI1Q6ICB0 168 aa20.24■□□□□ 0.83
CCDC7-201ENST00000277657 CADM2Q8N3J6 435 aa20.24■□□□□ 0.83
CCDC7-201ENST00000277657 GATSQ8NAP1 163 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms