RNA–Protein interactions for RNA: ENST00000268720.9

CPNE7-201, Transcript of copine 7, humanhuman

TSL 1 (best) BASIC

Gene CPNE7, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-201ENST00000268720 ST3GAL3Q11203 375 aa17.69■□□□□ 0.42
CPNE7-201ENST00000268720 TSPAN31Q12999 210 aa17.69■□□□□ 0.42
CPNE7-201ENST00000268720 PRAMEF8Q5VWM4 474 aa17.69■□□□□ 0.42
CPNE7-201ENST00000268720 PRAMEF7Q5VXH5 474 aa17.69■□□□□ 0.42
CPNE7-201ENST00000268720 HEPHL1Q6MZM0 1159 aa17.69■□□□□ 0.42
CPNE7-201ENST00000268720 ZNF836Q6ZNA1 936 aa17.69■□□□□ 0.42
CPNE7-201ENST00000268720 LINC00471Q8N535 108 aa17.69■□□□□ 0.42
CPNE7-201ENST00000268720 ZNF485Q8NCK3 441 aa17.69■□□□□ 0.42
CPNE7-201ENST00000268720 GALNT6Q8NCL4 622 aa17.69■□□□□ 0.42
CPNE7-201ENST00000268720 PIGXQ8TBF5 258 aa17.69■□□□□ 0.42
CPNE7-201ENST00000268720 MRPL38Q96DV4 380 aaKnown RBP17.69■□□□□ 0.42
CPNE7-201ENST00000268720 RNF32Q9H0A6 362 aa17.69■□□□□ 0.42
CPNE7-201ENST00000268720 EVA1BQ9NVM1 165 aa17.69■□□□□ 0.42
CPNE7-201ENST00000268720 MAT2BQ9NZL9 334 aa17.69■□□□□ 0.42
CPNE7-201ENST00000268720 MUC3AQ02505 3323 aa17.68■□□□□ 0.42
CPNE7-201ENST00000268720 GTPBP1O00178 669 aaKnown RBP17.68■□□□□ 0.42
CPNE7-201ENST00000268720 PSMD9O00233 223 aa17.68■□□□□ 0.42
CPNE7-201ENST00000268720 SURF4O15260 269 aa17.68■□□□□ 0.42
CPNE7-201ENST00000268720 SEC14L5O43304 696 aa17.68■□□□□ 0.42
CPNE7-201ENST00000268720 LYRM1O43325 122 aa17.68■□□□□ 0.42
CPNE7-201ENST00000268720 TRAPPC2P0DI81 140 aa17.68■□□□□ 0.42
CPNE7-201ENST00000268720 TRAPPC2BP0DI82 140 aa17.68■□□□□ 0.42
CPNE7-201ENST00000268720 NDUFV2P19404 249 aa17.68■□□□□ 0.42
CPNE7-201ENST00000268720 GSTM3P21266 225 aa17.68■□□□□ 0.42
CPNE7-201ENST00000268720 HTR2BP41595 481 aa17.68■□□□□ 0.42
CPNE7-201ENST00000268720 PPP3R1P63098 170 aa17.68■□□□□ 0.42
CPNE7-201ENST00000268720 DEFB110Q30KQ9 67 aa17.68■□□□□ 0.42
CPNE7-201ENST00000268720 PUS10Q3MIT2 529 aaKnown RBP17.68■□□□□ 0.42
CPNE7-201ENST00000268720 OR4K14Q8NGD5 310 aa17.68■□□□□ 0.42
CPNE7-201ENST00000268720 OR13C2Q8NGS9 318 aa17.68■□□□□ 0.42
CPNE7-201ENST00000268720 GNPDA2Q8TDQ7 276 aa17.68■□□□□ 0.42
CPNE7-201ENST00000268720 CITED4Q96RK1 184 aa17.68■□□□□ 0.42
CPNE7-201ENST00000268720 ZNF559Q9BR84 538 aa17.68■□□□□ 0.42
CPNE7-201ENST00000268720 SLC28A3Q9HAS3 691 aa17.68■□□□□ 0.42
CPNE7-201ENST00000268720 MCUBQ9NWR8 336 aa17.68■□□□□ 0.42
CPNE7-201ENST00000268720 PCOLCE2Q9UKZ9 415 aa17.68■□□□□ 0.42
CPNE7-201ENST00000268720 EXOSC1Q9Y3B2 195 aaKnown RBP17.68■□□□□ 0.42
CPNE7-201ENST00000268720 HCRTR1O43613 425 aa17.68■□□□□ 0.42
CPNE7-201ENST00000268720 TSC22D2O75157 780 aa17.68■□□□□ 0.42
CPNE7-201ENST00000268720 SMIM10L1P0DMW3 83 aa17.68■□□□□ 0.42
CPNE7-201ENST00000268720 NDUFS1P28331 727 aa17.68■□□□□ 0.42
CPNE7-201ENST00000268720 SHC1P29353 583 aa17.68■□□□□ 0.42
CPNE7-201ENST00000268720 EVX1P49640 407 aa17.68■□□□□ 0.42
CPNE7-201ENST00000268720 FXYD6P3P58550 94 aa17.68■□□□□ 0.42
CPNE7-201ENST00000268720 E2F1Q01094 437 aa17.68■□□□□ 0.42
CPNE7-201ENST00000268720 FAPQ12884 760 aa17.68■□□□□ 0.42
CPNE7-201ENST00000268720 FZD5Q13467 585 aa17.68■□□□□ 0.42
CPNE7-201ENST00000268720 ALG11Q2TAA5 492 aa17.68■□□□□ 0.42
CPNE7-201ENST00000268720 FIGLAQ6QHK4 219 aa17.68■□□□□ 0.42
CPNE7-201ENST00000268720 SMIM10Q96HG1 83 aa17.68■□□□□ 0.42
CPNE7-201ENST00000268720 MS4A4EQ96PG1 132 aa17.68■□□□□ 0.42
CPNE7-201ENST00000268720 TCEAL2Q9H3H9 227 aaPredicted RBP17.68■□□□□ 0.42
CPNE7-201ENST00000268720 BEX1Q9HBH7 125 aa17.68■□□□□ 0.42
CPNE7-201ENST00000268720 PTGFRNQ9P2B2 879 aa17.68■□□□□ 0.42
CPNE7-201ENST00000268720 CBLCQ9ULV8 474 aa17.68■□□□□ 0.42
CPNE7-201ENST00000268720 WDR45Q9Y484 360 aa17.68■□□□□ 0.42
CPNE7-201ENST00000268720 KDM4EB2RXH2 506 aaPredicted RBP17.67■□□□□ 0.42
CPNE7-201ENST00000268720 HTR2AP28223 471 aa17.67■□□□□ 0.42
CPNE7-201ENST00000268720 PRKAR1BP31321 381 aa17.67■□□□□ 0.42
CPNE7-201ENST00000268720 MAGEB1P43366 347 aa17.67■□□□□ 0.42
CPNE7-201ENST00000268720 TPMTP51580 245 aa17.67■□□□□ 0.42
CPNE7-201ENST00000268720 ARIH2OSQ8N7S6 290 aa17.67■□□□□ 0.42
CPNE7-201ENST00000268720 NT5CQ8TCD5 201 aa17.67■□□□□ 0.42
CPNE7-201ENST00000268720 FAM3CQ92520 227 aa17.67■□□□□ 0.42
CPNE7-201ENST00000268720 PTCHD1Q96NR3 888 aa17.67■□□□□ 0.42
CPNE7-201ENST00000268720 SLA2Q9H6Q3 261 aa17.67■□□□□ 0.42
CPNE7-201ENST00000268720 ACOXLQ9NUZ1 547 aa17.67■□□□□ 0.42
CPNE7-201ENST00000268720 RBFOX1Q9NWB1 397 aaKnown RBP17.67■□□□□ 0.42
CPNE7-201ENST00000268720 KCNE5Q9UJ90 142 aa17.67■□□□□ 0.42
CPNE7-201ENST00000268720 ZNF443Q9Y2A4 671 aaPredicted RBP17.67■□□□□ 0.42
CPNE7-201ENST00000268720 NCKAP1Q9Y2A7 1128 aa17.67■□□□□ 0.42
CPNE7-201ENST00000268720 MRPS7Q9Y2R9 242 aaKnown RBP17.67■□□□□ 0.42
CPNE7-201ENST00000268720 TRDV1A0A1B0GX56 115 aa17.67■□□□□ 0.42
CPNE7-201ENST00000268720 PLOD3O60568 738 aa17.67■□□□□ 0.42
CPNE7-201ENST00000268720 ALX3O95076 343 aa17.67■□□□□ 0.42
CPNE7-201ENST00000268720 INPP1P49441 399 aa17.67■□□□□ 0.42
CPNE7-201ENST00000268720 AGFG1P52594 562 aaKnown RBP17.67■□□□□ 0.42
CPNE7-201ENST00000268720 SUZ12Q15022 739 aaKnown RBP17.67■□□□□ 0.42
CPNE7-201ENST00000268720 TMEM91Q6ZNR0 172 aa17.67■□□□□ 0.42
CPNE7-201ENST00000268720 OR2L13Q8N349 312 aa17.67■□□□□ 0.42
CPNE7-201ENST00000268720 SLC22A18Q96BI1 424 aa17.67■□□□□ 0.42
CPNE7-201ENST00000268720 IRF2BPLQ9H1B7 796 aa17.67■□□□□ 0.42
CPNE7-201ENST00000268720 MRPS18AQ9NVS2 196 aaKnown RBP17.67■□□□□ 0.42
CPNE7-201ENST00000268720 CALML5Q9NZT1 146 aa17.67■□□□□ 0.42
CPNE7-201ENST00000268720 TDRD6O60522 2096 aaKnown RBP17.67■□□□□ 0.42
CPNE7-201ENST00000268720 TFPIP10646 304 aa17.66■□□□□ 0.42
CPNE7-201ENST00000268720 IFI30P13284 250 aa17.66■□□□□ 0.42
CPNE7-201ENST00000268720 ELK1P19419 428 aa17.66■□□□□ 0.42
CPNE7-201ENST00000268720 FGF9P31371 208 aaPredicted RBP17.66■□□□□ 0.42
CPNE7-201ENST00000268720 EVI2BP34910 448 aa17.66■□□□□ 0.42
CPNE7-201ENST00000268720 SRP54P61011 504 aaKnown RBP17.66■□□□□ 0.42
CPNE7-201ENST00000268720 OTPQ5XKR4 325 aa17.66■□□□□ 0.42
CPNE7-201ENST00000268720 CD200R1LQ6Q8B3 271 aa17.66■□□□□ 0.42
CPNE7-201ENST00000268720 RASSF6Q6ZTQ3 369 aa17.66■□□□□ 0.42
CPNE7-201ENST00000268720 MRGPREQ86SM8 312 aa17.66■□□□□ 0.42
CPNE7-201ENST00000268720 C17orf47Q8NEP4 570 aa17.66■□□□□ 0.42
CPNE7-201ENST00000268720 GCDHQ92947 438 aaPredicted RBP17.66■□□□□ 0.42
CPNE7-201ENST00000268720 SOSTQ9BQB4 213 aa17.66■□□□□ 0.42
CPNE7-201ENST00000268720 HDHD2Q9H0R4 259 aa17.66■□□□□ 0.42
CPNE7-201ENST00000268720 TRPV5Q9NQA5 729 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms