RNA–Protein interactions for RNA: ENST00000265993.13

TCTN3-201, Transcript of tectonic family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCTN3, Length 2,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-201ENST00000265993 TPMTP51580 245 aa10.07□□□□□ -0.8
TCTN3-201ENST00000265993 CCDC85BQ15834 202 aaPredicted RBP10.07□□□□□ -0.8
TCTN3-201ENST00000265993 NIPAL3Q6P499 406 aa10.07□□□□□ -0.8
TCTN3-201ENST00000265993 XKRXQ6PP77 449 aa10.07□□□□□ -0.8
TCTN3-201ENST00000265993 Q6ZSR6 202 aa10.07□□□□□ -0.8
TCTN3-201ENST00000265993 RANBP3LQ86VV4 465 aaPredicted RBP10.07□□□□□ -0.8
TCTN3-201ENST00000265993 SLC22A18ASQ8N1D0 253 aa10.07□□□□□ -0.8
TCTN3-201ENST00000265993 ZNF619Q8N2I2 560 aa10.07□□□□□ -0.8
TCTN3-201ENST00000265993 PIAS4Q8N2W9 510 aaPredicted RBP10.07□□□□□ -0.8
TCTN3-201ENST00000265993 Q8N402 240 aa10.07□□□□□ -0.8
TCTN3-201ENST00000265993 RPLP0P6Q8NHW5 317 aa10.07□□□□□ -0.8
TCTN3-201ENST00000265993 CNOT9Q92600 299 aaKnown RBP10.07□□□□□ -0.8
TCTN3-201ENST00000265993 RERGQ96A58 199 aaPredicted RBP10.07□□□□□ -0.8
TCTN3-201ENST00000265993 FAM131CQ96AQ9 280 aa10.07□□□□□ -0.8
TCTN3-201ENST00000265993 SLC22A18Q96BI1 424 aa10.07□□□□□ -0.8
TCTN3-201ENST00000265993 RIPOR3Q96MK2 946 aa10.07□□□□□ -0.8
TCTN3-201ENST00000265993 CD180Q99467 661 aa10.07□□□□□ -0.8
TCTN3-201ENST00000265993 ATF6BQ99941 703 aa10.07□□□□□ -0.8
TCTN3-201ENST00000265993 ALG8Q9BVK2 526 aa10.07□□□□□ -0.8
TCTN3-201ENST00000265993 IFT27Q9BW83 186 aa10.07□□□□□ -0.8
TCTN3-201ENST00000265993 LRRN3Q9H3W5 708 aa10.07□□□□□ -0.8
TCTN3-201ENST00000265993 ANKRD19PQ9H560 264 aa10.07□□□□□ -0.8
TCTN3-201ENST00000265993 CACYBPQ9HB71 228 aaKnown RBP10.07□□□□□ -0.8
TCTN3-201ENST00000265993 RANGRFQ9HD47 186 aaPredicted RBP10.07□□□□□ -0.8
TCTN3-201ENST00000265993 PLSCR3Q9NRY6 295 aa10.07□□□□□ -0.8
TCTN3-201ENST00000265993 ZNF223Q9UK11 482 aaPredicted RBP10.07□□□□□ -0.8
TCTN3-201ENST00000265993 C19orf53Q9UNZ5 99 aaPredicted RBP10.07□□□□□ -0.8
TCTN3-201ENST00000265993 WDFY4Q6ZS81 3184 aa10.07□□□□□ -0.8
TCTN3-201ENST00000265993 TRDV1A0A1B0GX56 115 aa10.07□□□□□ -0.8
TCTN3-201ENST00000265993 B4DXG7 233 aa10.07□□□□□ -0.8
TCTN3-201ENST00000265993 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.07□□□□□ -0.8
TCTN3-201ENST00000265993 CYR61O00622 381 aa10.07□□□□□ -0.8
TCTN3-201ENST00000265993 BHLHE40O14503 412 aa10.07□□□□□ -0.8
TCTN3-201ENST00000265993 IGHA1P01876 353 aa10.07□□□□□ -0.8
TCTN3-201ENST00000265993 NGFRP08138 427 aa10.07□□□□□ -0.8
TCTN3-201ENST00000265993 CHRNB1P11230 501 aa10.07□□□□□ -0.8
TCTN3-201ENST00000265993 NID1P14543 1247 aa10.07□□□□□ -0.8
TCTN3-201ENST00000265993 HNRNPA2B1P22626 353 aaKnown RBP10.07□□□□□ -0.8
TCTN3-201ENST00000265993 RAB25P57735 213 aa10.07□□□□□ -0.8
TCTN3-201ENST00000265993 OR10A3P58181 314 aa10.07□□□□□ -0.8
TCTN3-201ENST00000265993 RACK1P63244 317 aaKnown RBP10.07□□□□□ -0.8
TCTN3-201ENST00000265993 FAM53BQ14153 422 aa10.07□□□□□ -0.8
TCTN3-201ENST00000265993 ERV3-1Q14264 604 aa10.07□□□□□ -0.8
TCTN3-201ENST00000265993 KIR2DS3Q14952 304 aa10.07□□□□□ -0.8
TCTN3-201ENST00000265993 NDUFAF6Q330K2 333 aa10.07□□□□□ -0.8
TCTN3-201ENST00000265993 GXYLT1Q4G148 440 aa10.07□□□□□ -0.8
TCTN3-201ENST00000265993 C6orf183Q5T699 404 aa10.07□□□□□ -0.8
TCTN3-201ENST00000265993 ZNF544Q6NX49 715 aa10.07□□□□□ -0.8
TCTN3-201ENST00000265993 ARL9Q6T311 187 aa10.07□□□□□ -0.8
TCTN3-201ENST00000265993 C17orf47Q8NEP4 570 aa10.07□□□□□ -0.8
TCTN3-201ENST00000265993 OR13C5Q8NGS8 318 aa10.07□□□□□ -0.8
TCTN3-201ENST00000265993 OR9A4Q8NGU2 314 aa10.07□□□□□ -0.8
TCTN3-201ENST00000265993 CHAC2Q8WUX2 184 aa10.07□□□□□ -0.8
TCTN3-201ENST00000265993 RSC1A1Q92681 617 aa10.07□□□□□ -0.8
TCTN3-201ENST00000265993 BPIFA2Q96DR5 249 aa10.07□□□□□ -0.8
TCTN3-201ENST00000265993 NTMQ9P121 344 aa10.07□□□□□ -0.8
TCTN3-201ENST00000265993 PTGFRNQ9P2B2 879 aa10.07□□□□□ -0.8
TCTN3-201ENST00000265993 DTX4Q9Y2E6 619 aa10.07□□□□□ -0.8
TCTN3-201ENST00000265993 LRP4O75096 1905 aa10.07□□□□□ -0.8
TCTN3-201ENST00000265993 A0A1W2PPK0 400 aa10.06□□□□□ -0.8
TCTN3-201ENST00000265993 HLA-DPB1P04440 258 aa10.06□□□□□ -0.8
TCTN3-201ENST00000265993 SLC2A2P11168 524 aaPredicted RBP10.06□□□□□ -0.8
TCTN3-201ENST00000265993 PSKH1P11801 424 aa10.06□□□□□ -0.8
TCTN3-201ENST00000265993 BMP7P18075 431 aa10.06□□□□□ -0.8
TCTN3-201ENST00000265993 NDUFS1P28331 727 aa10.06□□□□□ -0.8
TCTN3-201ENST00000265993 ACVR1BP36896 505 aa10.06□□□□□ -0.8
TCTN3-201ENST00000265993 ARFIP1P53367 373 aa10.06□□□□□ -0.8
TCTN3-201ENST00000265993 KIAA1024LP59773 190 aa10.06□□□□□ -0.8
TCTN3-201ENST00000265993 E2F1Q01094 437 aa10.06□□□□□ -0.8
TCTN3-201ENST00000265993 CD83Q01151 205 aa10.06□□□□□ -0.8
TCTN3-201ENST00000265993 PRICKLE4Q2TBC4 344 aa10.06□□□□□ -0.8
TCTN3-201ENST00000265993 ABHD13Q7L211 337 aa10.06□□□□□ -0.8
TCTN3-201ENST00000265993 SYT9Q86SS6 491 aa10.06□□□□□ -0.8
TCTN3-201ENST00000265993 ARL14Q8N4G2 192 aa10.06□□□□□ -0.8
TCTN3-201ENST00000265993 FAM181AQ8N9Y4 354 aa10.06□□□□□ -0.8
TCTN3-201ENST00000265993 CAMKVQ8NCB2 501 aa10.06□□□□□ -0.8
TCTN3-201ENST00000265993 SLC37A3Q8NCC5 494 aa10.06□□□□□ -0.8
TCTN3-201ENST00000265993 SETD6Q8TBK2 473 aa10.06□□□□□ -0.8
TCTN3-201ENST00000265993 HMGB4Q8WW32 186 aa10.06□□□□□ -0.8
TCTN3-201ENST00000265993 KISS1RQ969F8 398 aaPredicted RBP10.06□□□□□ -0.8
TCTN3-201ENST00000265993 NECTIN4Q96NY8 510 aa10.06□□□□□ -0.8
TCTN3-201ENST00000265993 DZANK1Q9NVP4 752 aa10.06□□□□□ -0.8
TCTN3-201ENST00000265993 CLEC1BQ9P126 229 aa10.06□□□□□ -0.8
TCTN3-201ENST00000265993 CPNE7Q9UBL6 633 aa10.06□□□□□ -0.8
TCTN3-201ENST00000265993 GRIP1Q9Y3R0 1128 aa10.06□□□□□ -0.8
TCTN3-201ENST00000265993 PCNX3Q9H6A9 2034 aa10.06□□□□□ -0.8
TCTN3-201ENST00000265993 THADAQ6YHU6 1953 aa10.06□□□□□ -0.8
TCTN3-201ENST00000265993 COL6A3P12111 3177 aa10.06□□□□□ -0.8
TCTN3-201ENST00000265993 SPAG17Q6Q759 2223 aa10.06□□□□□ -0.8
TCTN3-201ENST00000265993 CCDC182A6NF36 153 aa10.06□□□□□ -0.8
TCTN3-201ENST00000265993 GTPBP1O00178 669 aaKnown RBP10.06□□□□□ -0.8
TCTN3-201ENST00000265993 IMPA2O14732 288 aa10.06□□□□□ -0.8
TCTN3-201ENST00000265993 LYPD3O95274 346 aa10.06□□□□□ -0.8
TCTN3-201ENST00000265993 PPP1R3DO95685 299 aa10.06□□□□□ -0.8
TCTN3-201ENST00000265993 SHC1P29353 583 aa10.06□□□□□ -0.8
TCTN3-201ENST00000265993 EMDP50402 254 aa10.06□□□□□ -0.8
TCTN3-201ENST00000265993 FOXK2Q01167 660 aa10.06□□□□□ -0.8
TCTN3-201ENST00000265993 SLC3A1Q07837 685 aa10.06□□□□□ -0.8
TCTN3-201ENST00000265993 CRMP1Q14194 572 aa10.06□□□□□ -0.8
TCTN3-201ENST00000265993 IDNKQ5T6J7 187 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms