RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 MARCH3Q86UD3 253 aa8.6□□□□□ -1.03
SSR3-201ENST00000265044 CACTIN-AS1Q8N1I8 211 aa8.6□□□□□ -1.03
SSR3-201ENST00000265044 TOR1AIP2Q8NFQ8 470 aa8.6□□□□□ -1.03
SSR3-201ENST00000265044 OR4K17Q8NGC6 315 aa8.6□□□□□ -1.03
SSR3-201ENST00000265044 DNAJA4Q8WW22 397 aaPredicted RBP8.6□□□□□ -1.03
SSR3-201ENST00000265044 HSPBAP1Q96EW2 488 aa8.6□□□□□ -1.03
SSR3-201ENST00000265044 GABARAPL1Q9H0R8 117 aa8.6□□□□□ -1.03
SSR3-201ENST00000265044 OR52D1Q9H346 318 aa8.6□□□□□ -1.03
SSR3-201ENST00000265044 TPK1Q9H3S4 243 aa8.6□□□□□ -1.03
SSR3-201ENST00000265044 PRAMEF25A6NGN4 478 aa8.6□□□□□ -1.03
SSR3-201ENST00000265044 XKRYO14609 159 aa8.6□□□□□ -1.03
SSR3-201ENST00000265044 ZNF3P17036 446 aa8.6□□□□□ -1.03
SSR3-201ENST00000265044 ACVR2AP27037 513 aa8.6□□□□□ -1.03
SSR3-201ENST00000265044 B3GNT7Q8NFL0 401 aa8.6□□□□□ -1.03
SSR3-201ENST00000265044 OR51G2Q8NGK0 314 aa8.6□□□□□ -1.03
SSR3-201ENST00000265044 PFN4Q8NHR9 129 aa8.6□□□□□ -1.03
SSR3-201ENST00000265044 SLC22A8Q8TCC7 542 aa8.6□□□□□ -1.03
SSR3-201ENST00000265044 C1GALT1C1Q96EU7 318 aa8.6□□□□□ -1.03
SSR3-201ENST00000265044 C6orf62Q9GZU0 229 aaPredicted RBP8.6□□□□□ -1.03
SSR3-201ENST00000265044 LHPPQ9H008 270 aa8.6□□□□□ -1.03
SSR3-201ENST00000265044 TMEM9BQ9NQ34 198 aa8.6□□□□□ -1.03
SSR3-201ENST00000265044 POLE3Q9NRF9 147 aa8.6□□□□□ -1.03
SSR3-201ENST00000265044 KLK4Q9Y5K2 254 aa8.6□□□□□ -1.03
SSR3-201ENST00000265044 CACNA1GO43497 2377 aa8.6□□□□□ -1.03
SSR3-201ENST00000265044 TEX51A0A1B0GUA7 166 aa8.59□□□□□ -1.03
SSR3-201ENST00000265044 A0A1W2PPW3 197 aa8.59□□□□□ -1.03
SSR3-201ENST00000265044 C4orf47A7E2U8 309 aa8.59□□□□□ -1.03
SSR3-201ENST00000265044 PLD2O14939 933 aa8.59□□□□□ -1.03
SSR3-201ENST00000265044 AIREO43918 545 aa8.59□□□□□ -1.03
SSR3-201ENST00000265044 FUT1P19526 365 aa8.59□□□□□ -1.03
SSR3-201ENST00000265044 FUT4P22083 530 aa8.59□□□□□ -1.03
SSR3-201ENST00000265044 SLC6A6P31641 620 aa8.59□□□□□ -1.03
SSR3-201ENST00000265044 S100A5P33763 92 aa8.59□□□□□ -1.03
SSR3-201ENST00000265044 LGALS3BPQ08380 585 aa8.59□□□□□ -1.03
SSR3-201ENST00000265044 TIMM50Q3ZCQ8 353 aa8.59□□□□□ -1.03
SSR3-201ENST00000265044 ARMCX4Q5H9R4 360 aa8.59□□□□□ -1.03
SSR3-201ENST00000265044 MBOAT2Q6ZWT7 520 aa8.59□□□□□ -1.03
SSR3-201ENST00000265044 OR13C2Q8NGS9 318 aa8.59□□□□□ -1.03
SSR3-201ENST00000265044 TAPBPLQ9BX59 468 aa8.59□□□□□ -1.03
SSR3-201ENST00000265044 SIDT1Q9NXL6 827 aaKnown RBP8.59□□□□□ -1.03
SSR3-201ENST00000265044 PPP4R1LQ9P1A2 415 aa8.59□□□□□ -1.03
SSR3-201ENST00000265044 NSG1A0A0A6YYJ2 146 aa8.59□□□□□ -1.03
SSR3-201ENST00000265044 KIAA0513O60268 411 aa8.59□□□□□ -1.03
SSR3-201ENST00000265044 NTN1O95631 604 aa8.59□□□□□ -1.03
SSR3-201ENST00000265044 EMX1Q04741 257 aaPredicted RBP8.59□□□□□ -1.03
SSR3-201ENST00000265044 ZSWIM7Q19AV6 140 aa8.59□□□□□ -1.03
SSR3-201ENST00000265044 PLBD1Q6P4A8 553 aa8.59□□□□□ -1.03
SSR3-201ENST00000265044 DHRS13Q6UX07 377 aa8.59□□□□□ -1.03
SSR3-201ENST00000265044 IL20RBQ6UXL0 311 aa8.59□□□□□ -1.03
SSR3-201ENST00000265044 LHFPL3Q86UP9 236 aa8.59□□□□□ -1.03
SSR3-201ENST00000265044 C17orf82Q86X59 251 aaPredicted RBP8.59□□□□□ -1.03
SSR3-201ENST00000265044 CPOQ8IVL8 374 aa8.59□□□□□ -1.03
SSR3-201ENST00000265044 OR51L1Q8NGJ5 315 aa8.59□□□□□ -1.03
SSR3-201ENST00000265044 RHOXF1Q8NHV9 184 aa8.59□□□□□ -1.03
SSR3-201ENST00000265044 RAB2BQ8WUD1 216 aa8.59□□□□□ -1.03
SSR3-201ENST00000265044 TMEM203Q969S6 136 aa8.59□□□□□ -1.03
SSR3-201ENST00000265044 VSTM2LQ96N03 204 aa8.59□□□□□ -1.03
SSR3-201ENST00000265044 RHNO1Q9BSD3 238 aa8.59□□□□□ -1.03
SSR3-201ENST00000265044 KLHL1Q9NR64 748 aa8.59□□□□□ -1.03
SSR3-201ENST00000265044 TNFRSF10DQ9UBN6 386 aa8.59□□□□□ -1.03
SSR3-201ENST00000265044 LOXL2Q9Y4K0 774 aa8.59□□□□□ -1.03
SSR3-201ENST00000265044 PCNX2A6NKB5 2137 aa8.59□□□□□ -1.03
SSR3-201ENST00000265044 MN1Q10571 1320 aaPredicted RBP8.59□□□□□ -1.03
SSR3-201ENST00000265044 TP53I11O14683 189 aa8.59□□□□□ -1.03
SSR3-201ENST00000265044 AHSA1O95433 338 aa8.59□□□□□ -1.03
SSR3-201ENST00000265044 PPP1R3DO95685 299 aa8.59□□□□□ -1.03
SSR3-201ENST00000265044 MRPL3P09001 348 aaKnown RBP8.59□□□□□ -1.03
SSR3-201ENST00000265044 PSMA1P25786 263 aaKnown RBP8.59□□□□□ -1.03
SSR3-201ENST00000265044 CLDN6P56747 220 aa8.59□□□□□ -1.03
SSR3-201ENST00000265044 GABARAPL2P60520 117 aa8.59□□□□□ -1.03
SSR3-201ENST00000265044 MVKQ03426 396 aa8.59□□□□□ -1.03
SSR3-201ENST00000265044 MEDAGQ5VYS4 303 aa8.59□□□□□ -1.03
SSR3-201ENST00000265044 ZNF574Q6ZN55 896 aaPredicted RBP8.59□□□□□ -1.03
SSR3-201ENST00000265044 OR4K13Q8NH42 304 aa8.59□□□□□ -1.03
SSR3-201ENST00000265044 PTPMT1Q8WUK0 201 aaPredicted RBP8.59□□□□□ -1.03
SSR3-201ENST00000265044 ISOC1Q96CN7 298 aa8.59□□□□□ -1.03
SSR3-201ENST00000265044 TMEM80Q96HE8 168 aa8.59□□□□□ -1.03
SSR3-201ENST00000265044 TTTY10Q9BZA0 68 aa8.59□□□□□ -1.03
SSR3-201ENST00000265044 SDHAF3Q9NRP4 125 aa8.59□□□□□ -1.03
SSR3-201ENST00000265044 NPFFR2Q9Y5X5 522 aa8.59□□□□□ -1.03
SSR3-201ENST00000265044 REV3LO60673 3130 aa8.59□□□□□ -1.03
SSR3-201ENST00000265044 GDF9O60383 454 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 ICOSLGO75144 302 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 PPM1BO75688 479 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 ADORA3P0DMS8 318 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 PNLIPP16233 465 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 ZNF41P51814 821 aaPredicted RBP8.58□□□□□ -1.04
SSR3-201ENST00000265044 HMGA2P52926 109 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 RPS3AP61247 264 aaKnown RBP8.58□□□□□ -1.04
SSR3-201ENST00000265044 SHBQ15464 509 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 CEBPEQ15744 281 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 GXYLT1Q4G148 440 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 GTF2IRD2BQ6EKJ0 949 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 SLC23A3Q6PIS1 610 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 B3GLCTQ6Y288 498 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 USP51Q70EK9 711 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 CXXC5Q7LFL8 322 aaKnown RBP8.58□□□□□ -1.04
SSR3-201ENST00000265044 PRSS48Q7RTY5 328 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 GPR155Q7Z3F1 870 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 CPEB2Q7Z5Q1 589 aaKnown RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms