RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 EDN3P14138 238 aa11.33□□□□□ -0.6
SMG6-201ENST00000263073 SERPINA2P20848 420 aa11.33□□□□□ -0.6
SMG6-201ENST00000263073 LSMEM2Q8N112 164 aa11.33□□□□□ -0.6
SMG6-201ENST00000263073 LTB4R2Q9NPC1 389 aa11.33□□□□□ -0.6
SMG6-201ENST00000263073 TOPAZ1Q8N9V7 1692 aa11.33□□□□□ -0.6
SMG6-201ENST00000263073 TTLL8A6PVC2 850 aa11.33□□□□□ -0.6
SMG6-201ENST00000263073 NDUFB2O95178 105 aa11.33□□□□□ -0.6
SMG6-201ENST00000263073 CSF1P09603 554 aa11.33□□□□□ -0.6
SMG6-201ENST00000263073 PDSS1Q5T2R2 415 aa11.33□□□□□ -0.6
SMG6-201ENST00000263073 FIGLAQ6QHK4 219 aa11.33□□□□□ -0.6
SMG6-201ENST00000263073 HSD11B1LQ7Z5J1 315 aa11.33□□□□□ -0.6
SMG6-201ENST00000263073 SCD5Q86SK9 330 aa11.33□□□□□ -0.6
SMG6-201ENST00000263073 SERPINA11Q86U17 422 aa11.33□□□□□ -0.6
SMG6-201ENST00000263073 ARHGAP12Q8IWW6 846 aa11.33□□□□□ -0.6
SMG6-201ENST00000263073 RSC1A1Q92681 617 aa11.33□□□□□ -0.6
SMG6-201ENST00000263073 DIO2Q92813 273 aa11.33□□□□□ -0.6
SMG6-201ENST00000263073 PRR14Q9BWN1 585 aa11.33□□□□□ -0.6
SMG6-201ENST00000263073 C11orf54Q9H0W9 315 aaPredicted RBP11.33□□□□□ -0.6
SMG6-201ENST00000263073 LINC00597Q9H2U6 94 aa11.33□□□□□ -0.6
SMG6-201ENST00000263073 MEPEQ9NQ76 525 aaPredicted RBP11.33□□□□□ -0.6
SMG6-201ENST00000263073 GPR34Q9UPC5 381 aa11.33□□□□□ -0.6
SMG6-201ENST00000263073 MED16Q9Y2X0 877 aa11.33□□□□□ -0.6
SMG6-201ENST00000263073 PUS1Q9Y606 427 aaKnown RBP eCLIP11.33□□□□□ -0.6
SMG6-201ENST00000263073 A0A1B0GTW7 788 aa11.33□□□□□ -0.6
SMG6-201ENST00000263073 ACOT7O00154 380 aa11.33□□□□□ -0.6
SMG6-201ENST00000263073 RNASET2O00584 256 aaKnown RBP11.33□□□□□ -0.6
SMG6-201ENST00000263073 BDH1Q02338 343 aa11.33□□□□□ -0.6
SMG6-201ENST00000263073 DLX2Q07687 328 aaPredicted RBP11.33□□□□□ -0.6
SMG6-201ENST00000263073 PM20D1Q6GTS8 502 aa11.33□□□□□ -0.6
SMG6-201ENST00000263073 COX15Q7KZN9 410 aa11.33□□□□□ -0.6
SMG6-201ENST00000263073 TRAPPC6BQ86SZ2 158 aa11.33□□□□□ -0.6
SMG6-201ENST00000263073 ZNF619Q8N2I2 560 aa11.33□□□□□ -0.6
SMG6-201ENST00000263073 SLC2A12Q8TD20 617 aa11.33□□□□□ -0.6
SMG6-201ENST00000263073 ADAMTS16Q8TE57 1224 aa11.33□□□□□ -0.6
SMG6-201ENST00000263073 OR52D1Q9H346 318 aa11.33□□□□□ -0.6
SMG6-201ENST00000263073 SH3BGRL2Q9UJC5 107 aa11.33□□□□□ -0.6
SMG6-201ENST00000263073 PCDHGA2Q9Y5H1 932 aa11.33□□□□□ -0.6
SMG6-201ENST00000263073 V9GY05 133 aa11.33□□□□□ -0.6
SMG6-201ENST00000263073 LILRB3O75022 631 aa11.33□□□□□ -0.6
SMG6-201ENST00000263073 OMGP23515 440 aa11.33□□□□□ -0.6
SMG6-201ENST00000263073 CD79BP40259 229 aa11.33□□□□□ -0.6
SMG6-201ENST00000263073 RPS5P46782 204 aaKnown RBP11.33□□□□□ -0.6
SMG6-201ENST00000263073 HBA1P69905 142 aa11.33□□□□□ -0.6
SMG6-201ENST00000263073 NTHL1P78549 312 aa11.33□□□□□ -0.6
SMG6-201ENST00000263073 LTBQ06643 244 aa11.33□□□□□ -0.6
SMG6-201ENST00000263073 ZNF169Q14929 603 aaPredicted RBP11.33□□□□□ -0.6
SMG6-201ENST00000263073 SGPP2Q8IWX5 399 aa11.33□□□□□ -0.6
SMG6-201ENST00000263073 TMEM163Q8TC26 289 aa11.33□□□□□ -0.6
SMG6-201ENST00000263073 ZNF681Q96N22 645 aa11.33□□□□□ -0.6
SMG6-201ENST00000263073 NUDT22Q9BRQ3 303 aa11.33□□□□□ -0.6
SMG6-201ENST00000263073 DEFB126Q9BYW3 111 aa11.33□□□□□ -0.6
SMG6-201ENST00000263073 CLMPQ9H6B4 373 aa11.33□□□□□ -0.6
SMG6-201ENST00000263073 PLCXD1Q9NUJ7 323 aa11.33□□□□□ -0.6
SMG6-201ENST00000263073 INSL6Q9Y581 213 aa11.33□□□□□ -0.6
SMG6-201ENST00000263073 VSTM2BA6NLU5 285 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 SYNGR4O95473 234 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 PPT1P50897 306 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 AFF3P51826 1226 aaKnown RBP11.32□□□□□ -0.6
SMG6-201ENST00000263073 WDR5P61964 334 aaKnown RBP11.32□□□□□ -0.6
SMG6-201ENST00000263073 GSTM4Q03013 218 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 TUBB3Q13509 450 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 FCN2Q15485 313 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 ARSJQ5FYB0 599 aaPredicted RBP11.32□□□□□ -0.6
SMG6-201ENST00000263073 RAB41Q5JT25 222 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 ZNF765Q7L2R6 523 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 C12orf45Q8N5I9 185 aaPredicted RBP11.32□□□□□ -0.6
SMG6-201ENST00000263073 SIMC1Q8NDZ2 872 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 POC1BQ8TC44 478 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 IL1F10Q8WWZ1 152 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 BPIFA2Q96DR5 249 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 MRPL22Q9NWU5 206 aaKnown RBP11.32□□□□□ -0.6
SMG6-201ENST00000263073 KDM4EB2RXH2 506 aaPredicted RBP11.32□□□□□ -0.6
SMG6-201ENST00000263073 PRKRAO75569 313 aaKnown RBP11.32□□□□□ -0.6
SMG6-201ENST00000263073 F13BP05160 661 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 RNH1P13489 461 aaKnown RBP11.32□□□□□ -0.6
SMG6-201ENST00000263073 DDCP20711 480 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 SHC1P29353 583 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 CCR7P32248 378 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 RORAP35398 523 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 RGRP47804 291 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 ZNF91Q05481 1191 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 RING1Q06587 406 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 TSSK4Q6SA08 328 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 MAMDC2Q7Z304 686 aaPredicted RBP11.32□□□□□ -0.6
SMG6-201ENST00000263073 RADILQ96JH8 1075 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 OR14A2Q96R54 314 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 GLS2Q9UI32 602 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 TACR1P25103 407 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 TLE3Q04726 772 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 OR7A5Q15622 319 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 EOGTQ5NDL2 527 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 PXDC1Q5TGL8 231 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 FBXW12Q6X9E4 464 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 ZNF836Q6ZNA1 936 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 CPT1CQ8TCG5 803 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 ELP4Q96EB1 424 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 WDR92Q96MX6 357 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 CIB4A0PJX0 185 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 HSPB6O14558 160 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 LILRB5O75023 590 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms