RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 TRPC1P48995 793 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 TDGF1P3P51864 188 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 CDH12P55289 794 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 PTGES3Q15185 160 aaKnown RBP5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.08□□□□□ -1.68e-6■■■■■ 36.9
TOPBP1-201ENST00000260810 CD300LDQ6UXZ3 194 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 DHDDSQ86SQ9 333 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 NAA40Q86UY6 237 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 CBR4Q8N4T8 237 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 ICA1LQ8NDH6 482 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 OR51A4Q8NGJ6 313 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 OR10AC1Q8NH08 325 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 DACT3Q96B18 629 aaPredicted RBP5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 TUBGCP3Q96CW5 907 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 MUC13Q9H3R2 512 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 USE1Q9NZ43 259 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 TNFRSF10DQ9UBN6 386 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 GPN3Q9UHW5 284 aaPredicted RBP5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 TMCC3Q9ULS5 477 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 MRPS33Q9Y291 106 aaKnown RBP5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 FESP07332 822 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 GUSBP08236 651 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 GP1BBP13224 206 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 IDO1P14902 403 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 TOP3AQ13472 1001 aaPredicted RBP5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 DUOXA1Q1HG43 343 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 ARHGAP11BQ3KRB8 267 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 TMEM201Q5SNT2 666 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 CD200R1LQ6Q8B3 271 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 LRRC74BQ6ZQY2 392 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 NPEPL1Q8NDH3 523 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 NR4A3Q92570 626 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 MAGED4Q96JG8 741 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 FEVQ99581 238 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 SLIRPQ9GZT3 109 aaKnown RBP5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 U3KQV3 271 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 VSTM5A8MXK1 200 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 B4DGG1 531 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 MRASO14807 208 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 ZNF217O75362 1048 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 ANXA4P09525 319 aaPredicted RBP5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 CCL3P10147 92 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 R3HCC1LQ7Z5L2 792 aaKnown RBP5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 BCORP1Q8N888 145 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 SRFBP1Q8NEF9 429 aaKnown RBP5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 NFKBIDQ8NI38 313 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 ZNF519Q8TB69 540 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 ROPN1LQ96C74 230 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 ORAI1Q96D31 301 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 TSSK2Q96PF2 358 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 TBCDQ9BTW9 1192 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 SLITRK2Q9H156 845 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 FAM118AQ9NWS6 357 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 TAS2R9Q9NYW1 312 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 SPATA7Q9P0W8 599 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 ADAM29Q9UKF5 820 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 ADAM18Q9Y3Q7 739 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 HSPG2P98160 4391 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 LRP1BQ9NZR2 4599 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 OR6C68A6NDL8 312 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 FOXI3A8MTJ6 420 aaPredicted RBP5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 OR1F1O43749 312 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 PFDN1O60925 122 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 MPZL1O95297 269 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 BAG2O95816 211 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 SERPINA1P01009 418 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 LDLRP01130 860 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 ANXA5P08758 320 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 CCKBRP32239 447 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 NUDT1P36639 197 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 CDKN2AP42771 156 aaKnown RBP5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 C21orf59P57076 290 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 VSX2P58304 361 aaPredicted RBP5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 MC2RQ01718 297 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 FAM27D1Q5T7N8 215 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 SFRP4Q6FHJ7 346 aaPredicted RBP5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 Q6ZSR3 168 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 KRT74Q7RTS7 529 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 FAM46DQ8NEK8 389 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 RHOXF1Q8NHV9 184 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 CXorf40AQ8TE69 158 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 SELENOMQ8WWX9 145 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 CNBD2Q96M20 576 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 NPLQ9BXD5 320 aaPredicted RBP5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 SRXN1Q9BYN0 137 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 GP6Q9HCN6 339 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 BATF3Q9NR55 127 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 ACSS1Q9NUB1 689 aaPredicted RBP5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 IL20Q9NYY1 176 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 WWOXQ9NZC7 414 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 ATRQ13535 2644 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 hCG_2039718K7EN88 272 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 ERI3O43414 337 aaKnown RBP5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 ICOSLGO75144 302 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 ZNF883P0CG24 379 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 GAAP10253 952 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 VEGFCP49767 419 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 KIR2DS3Q14952 304 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 FAM189A2Q15884 450 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 TBC1D25Q3MII6 688 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms