RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 PRR23D1E9PI22 279 aaPredicted RBP14.13□□□□□ -0.15
DDX56-201ENST00000258772 E9PI62 339 aa14.13□□□□□ -0.15
DDX56-201ENST00000258772 INMT-MINDY4F8WBC2 141 aa14.13□□□□□ -0.15
DDX56-201ENST00000258772 PLPP2O43688 288 aa14.13□□□□□ -0.15
DDX56-201ENST00000258772 C1QBP02746 253 aa14.13□□□□□ -0.15
DDX56-201ENST00000258772 MT-ND5P03915 603 aa14.13□□□□□ -0.15
DDX56-201ENST00000258772 PRR23D2P0DMB1 279 aaPredicted RBP14.13□□□□□ -0.15
DDX56-201ENST00000258772 THBS2P35442 1172 aa14.13□□□□□ -0.15
DDX56-201ENST00000258772 AGFG1P52594 562 aaKnown RBP14.13□□□□□ -0.15
DDX56-201ENST00000258772 ADPRHP54922 357 aa14.13□□□□□ -0.15
DDX56-201ENST00000258772 RRAS2P62070 204 aaPredicted RBP14.13□□□□□ -0.15
DDX56-201ENST00000258772 GPM6BQ13491 265 aa14.13□□□□□ -0.15
DDX56-201ENST00000258772 FAM27D1Q5T7N8 215 aa14.13□□□□□ -0.15
DDX56-201ENST00000258772 RPL13AP3Q6NVV1 102 aa14.13□□□□□ -0.15
DDX56-201ENST00000258772 ARL9Q6T311 187 aa14.13□□□□□ -0.15
DDX56-201ENST00000258772 TMPRSS11FQ6ZWK6 438 aa14.13□□□□□ -0.15
DDX56-201ENST00000258772 CDK20Q8IZL9 346 aa14.13□□□□□ -0.15
DDX56-201ENST00000258772 GRPEL2Q8TAA5 225 aa14.13□□□□□ -0.15
DDX56-201ENST00000258772 KCTD12Q96CX2 325 aaKnown RBP14.13□□□□□ -0.15
DDX56-201ENST00000258772 BPIFA2Q96DR5 249 aa14.13□□□□□ -0.15
DDX56-201ENST00000258772 NDC1Q9BTX1 674 aa14.13□□□□□ -0.15
DDX56-201ENST00000258772 GON7Q9BXV9 100 aa14.13□□□□□ -0.15
DDX56-201ENST00000258772 NIPAL2Q9H841 368 aa14.13□□□□□ -0.15
DDX56-201ENST00000258772 ENAMQ9NRM1 1142 aa14.13□□□□□ -0.15
DDX56-201ENST00000258772 INPP5EQ9NRR6 644 aa14.13□□□□□ -0.15
DDX56-201ENST00000258772 ING3Q9NXR8 418 aa14.13□□□□□ -0.15
DDX56-201ENST00000258772 SIGLEC7Q9Y286 467 aa14.13□□□□□ -0.15
DDX56-201ENST00000258772 ARHGEF17Q96PE2 2063 aaPredicted RBP14.13□□□□□ -0.15
DDX56-201ENST00000258772 URADA6NGE7 173 aa14.12□□□□□ -0.15
DDX56-201ENST00000258772 LANCL1O43813 399 aa14.12□□□□□ -0.15
DDX56-201ENST00000258772 EIF4EP06730 217 aaKnown RBP14.12□□□□□ -0.15
DDX56-201ENST00000258772 CD53P19397 219 aa14.12□□□□□ -0.15
DDX56-201ENST00000258772 KIR2DL1P43626 348 aaPredicted RBP14.12□□□□□ -0.15
DDX56-201ENST00000258772 RFX3P48380 749 aa14.12□□□□□ -0.15
DDX56-201ENST00000258772 SLC16A1P53985 500 aa14.12□□□□□ -0.15
DDX56-201ENST00000258772 RPS7P62081 194 aaKnown RBP14.12□□□□□ -0.15
DDX56-201ENST00000258772 GPR176Q14439 515 aa14.12□□□□□ -0.15
DDX56-201ENST00000258772 CCDC85BQ15834 202 aaPredicted RBP14.12□□□□□ -0.15
DDX56-201ENST00000258772 GARNL3Q5VVW2 1013 aa14.12□□□□□ -0.15
DDX56-201ENST00000258772 ENPP7Q6UWV6 458 aa14.12□□□□□ -0.15
DDX56-201ENST00000258772 IL20RBQ6UXL0 311 aa14.12□□□□□ -0.15
DDX56-201ENST00000258772 RD3Q7Z3Z2 195 aa14.12□□□□□ -0.15
DDX56-201ENST00000258772 OR4M1Q8NGD0 313 aa14.12□□□□□ -0.15
DDX56-201ENST00000258772 OR13C2Q8NGS9 318 aa14.12□□□□□ -0.15
DDX56-201ENST00000258772 CCL4L1Q8NHW4 92 aa14.12□□□□□ -0.15
DDX56-201ENST00000258772 OR1E3Q8WZA6 343 aa14.12□□□□□ -0.15
DDX56-201ENST00000258772 FAM131CQ96AQ9 280 aa14.12□□□□□ -0.15
DDX56-201ENST00000258772 CREB3L1Q96BA8 519 aa14.12□□□□□ -0.15
DDX56-201ENST00000258772 THAP7Q9BT49 309 aaPredicted RBP14.12□□□□□ -0.15
DDX56-201ENST00000258772 OR51V1Q9H2C8 321 aa14.12□□□□□ -0.15
DDX56-201ENST00000258772 PRDM9Q9NQV7 894 aa14.12□□□□□ -0.15
DDX56-201ENST00000258772 DUSP22Q9NRW4 184 aa14.12□□□□□ -0.15
DDX56-201ENST00000258772 MCUBQ9NWR8 336 aa14.12□□□□□ -0.15
DDX56-201ENST00000258772 SATB2Q9UPW6 733 aa14.12□□□□□ -0.15
DDX56-201ENST00000258772 TNFSF14O43557 240 aa14.12□□□□□ -0.15
DDX56-201ENST00000258772 PLOD3O60568 738 aa14.12□□□□□ -0.15
DDX56-201ENST00000258772 FMO6PO60774 539 aa14.12□□□□□ -0.15
DDX56-201ENST00000258772 LDB3O75112 727 aa14.12□□□□□ -0.15
DDX56-201ENST00000258772 ALX3O95076 343 aa14.12□□□□□ -0.15
DDX56-201ENST00000258772 PAHP00439 452 aa14.12□□□□□ -0.15
DDX56-201ENST00000258772 TFPIP10646 304 aa14.12□□□□□ -0.15
DDX56-201ENST00000258772 IL9P15248 144 aa14.12□□□□□ -0.15
DDX56-201ENST00000258772 SLC6A1P30531 599 aa14.12□□□□□ -0.15
DDX56-201ENST00000258772 TALDO1P37837 337 aa14.12□□□□□ -0.15
DDX56-201ENST00000258772 E2F1Q01094 437 aa14.12□□□□□ -0.15
DDX56-201ENST00000258772 GALK2Q01415 458 aa14.12□□□□□ -0.15
DDX56-201ENST00000258772 TNK1Q13470 666 aa14.12□□□□□ -0.15
DDX56-201ENST00000258772 KIR2DS3Q14952 304 aa14.12□□□□□ -0.15
DDX56-201ENST00000258772 OAFQ86UD1 273 aa14.12□□□□□ -0.15
DDX56-201ENST00000258772 PLCZ1Q86YW0 608 aa14.12□□□□□ -0.15
DDX56-201ENST00000258772 GPALPP1Q8IXQ4 340 aa14.12□□□□□ -0.15
DDX56-201ENST00000258772 TMEFF1Q8IYR6 380 aa14.12□□□□□ -0.15
DDX56-201ENST00000258772 SHISA5Q8N114 240 aa14.12□□□□□ -0.15
DDX56-201ENST00000258772 SAMD12Q8N8I0 201 aa14.12□□□□□ -0.15
DDX56-201ENST00000258772 COX18Q8N8Q8 333 aa14.12□□□□□ -0.15
DDX56-201ENST00000258772 CDRT4Q8N9R6 151 aa14.12□□□□□ -0.15
DDX56-201ENST00000258772 ABHD4Q8TB40 342 aa14.12□□□□□ -0.15
DDX56-201ENST00000258772 GFM1Q96RP9 751 aaKnown RBP14.12□□□□□ -0.15
DDX56-201ENST00000258772 GALNT9Q9HCQ5 603 aa14.12□□□□□ -0.15
DDX56-201ENST00000258772 RASD1Q9Y272 281 aa14.12□□□□□ -0.15
DDX56-201ENST00000258772 LOC105369274A0A096LPK9 316 aa14.11□□□□□ -0.15
DDX56-201ENST00000258772 ZNF860A6NHJ4 632 aa14.11□□□□□ -0.15
DDX56-201ENST00000258772 LRRC72A6NJI9 287 aa14.11□□□□□ -0.15
DDX56-201ENST00000258772 K7EQS6 105 aa14.11□□□□□ -0.15
DDX56-201ENST00000258772 CPNE3O75131 537 aaKnown RBP14.11□□□□□ -0.15
DDX56-201ENST00000258772 MRPL3P09001 348 aaKnown RBP14.11□□□□□ -0.15
DDX56-201ENST00000258772 SBK2P0C263 348 aa14.11□□□□□ -0.15
DDX56-201ENST00000258772 SAGP10523 405 aaPredicted RBP14.11□□□□□ -0.15
DDX56-201ENST00000258772 NOS3P29474 1203 aa14.11□□□□□ -0.15
DDX56-201ENST00000258772 BMP8BP34820 402 aa14.11□□□□□ -0.15
DDX56-201ENST00000258772 ATP12AP54707 1039 aa14.11□□□□□ -0.15
DDX56-201ENST00000258772 OR10A3P58181 314 aa14.11□□□□□ -0.15
DDX56-201ENST00000258772 PPP2CBP62714 309 aa14.11□□□□□ -0.15
DDX56-201ENST00000258772 PPP2CAP67775 309 aa14.11□□□□□ -0.15
DDX56-201ENST00000258772 SHC2P98077 582 aa14.11□□□□□ -0.15
DDX56-201ENST00000258772 TRAM1Q15629 374 aa14.11□□□□□ -0.15
DDX56-201ENST00000258772 FCRLBQ6BAA4 426 aa14.11□□□□□ -0.15
DDX56-201ENST00000258772 FCRL6Q6DN72 434 aa14.11□□□□□ -0.15
DDX56-201ENST00000258772 SFXN4Q6P4A7 337 aa14.11□□□□□ -0.15
DDX56-201ENST00000258772 FIGNL1Q6PIW4 674 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms