RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 HSD17B12Q53GQ0 312 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 TRMT12Q53H54 448 aaKnown RBP4.42□□□□□ -1.7
USP44-201ENST00000258499 FAM78AQ5JUQ0 283 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 SLC48A1Q6P1K1 146 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 ZNF613Q6PF04 617 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 LYPD8Q6UX82 237 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 ZNF620Q6ZNG0 422 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 MEPCEQ7L2J0 689 aaKnown RBP4.42□□□□□ -1.7
USP44-201ENST00000258499 JAZF1Q86VZ6 243 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 PLCZ1Q86YW0 608 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 GPALPP1Q8IXQ4 340 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 FTMTQ8N4E7 242 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 ARL14Q8N4G2 192 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 SIRT6Q8N6T7 355 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 TMIEQ8NEW7 156 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 CHAC2Q8WUX2 184 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 ACOT12Q8WYK0 555 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 HERVK_113Q902F9 699 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 FGF13Q92913 245 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 GCDHQ92947 438 aaPredicted RBP4.42□□□□□ -1.7
USP44-201ENST00000258499 UPRTQ96BW1 309 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 SLC35A4Q96G79 324 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 TMEM43Q9BTV4 400 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 C1QTNF2Q9BXJ5 285 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 KRTAP3-3Q9BYR6 98 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 KRTAP3-2Q9BYR7 98 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 SLC17A9Q9BYT1 436 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 MTIF3Q9H2K0 278 aaKnown RBP4.42□□□□□ -1.7
USP44-201ENST00000258499 MKKSQ9NPJ1 570 aaPredicted RBP4.42□□□□□ -1.7
USP44-201ENST00000258499 PRSS16Q9NQE7 514 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 OR6C2Q9NZP2 312 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 NFKBIL1Q9UBC1 381 aaPredicted RBP4.42□□□□□ -1.7
USP44-201ENST00000258499 TMEM5Q9Y2B1 443 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 CHD5Q8TDI0 1954 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 FXYD6-FXYD2A0A087WZ82 144 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 PRAMEF27A3QJZ7 478 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 CDHR4A6H8M9 788 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 ACOD1A6NK06 481 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 ANXA2P2A6NMY6 339 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 A8MUA0 341 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 TEX46H3BTG2 121 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 GATBO75879 557 aaKnown RBP4.42□□□□□ -1.7
USP44-201ENST00000258499 SOD1P00441 154 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 SERPINA3P01011 423 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 HIST1H2ABP04908 130 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 CSN2P05814 226 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 ANXA2P07355 339 aaKnown RBP4.42□□□□□ -1.7
USP44-201ENST00000258499 PEPDP12955 493 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 AHCYP23526 432 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 HTR1FP30939 366 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 SLC6A6P31641 620 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 ADH7P40394 386 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 PCBP4P57723 403 aaKnown RBP4.42□□□□□ -1.7
USP44-201ENST00000258499 FBXW4P57775 412 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 DOC2BQ14184 412 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 LILRA6Q6PI73 481 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 MBOAT2Q6ZWT7 520 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 HIST3H2AQ7L7L0 130 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 TAF8Q7Z7C8 310 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 LRRC28Q86X40 367 aaPredicted RBP4.42□□□□□ -1.7
USP44-201ENST00000258499 ZNF676Q8N7Q3 588 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 OR7G2Q8NG99 324 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 ZNF563Q8TA94 476 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 THAP4Q8WY91 577 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 SMARCD2Q92925 531 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 HIST1H2ACQ93077 130 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 LRRC3BQ96PB8 259 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 HHIPQ96QV1 700 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 OR2M4Q96R27 311 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 TNFRSF13CQ96RJ3 184 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 DCLRE1CQ96SD1 692 aaKnown RBP4.42□□□□□ -1.7
USP44-201ENST00000258499 PDCD1LG2Q9BQ51 273 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 TRPM6Q9BX84 2022 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 MKRN2Q9H000 416 aaKnown RBP4.42□□□□□ -1.7
USP44-201ENST00000258499 FXYD6Q9H0Q3 95 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 TTYH1Q9H313 450 aaPredicted RBP4.42□□□□□ -1.7
USP44-201ENST00000258499 SRA1Q9HD15 236 aaKnown RBP4.42□□□□□ -1.7
USP44-201ENST00000258499 SOHLH2Q9NX45 425 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 TAS2R10Q9NYW0 307 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 MAFFQ9ULX9 164 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 IER3IP1Q9Y5U9 82 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 SESN1Q9Y6P5 492 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 ANKRD61A6NGH8 418 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 M0R233 179 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 STK25O00506 426 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 CDC42EP2O14613 210 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 RAD1O60671 282 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 ICMTO60725 284 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 RNGTTO60942 597 aaKnown RBP4.41□□□□□ -1.7
USP44-201ENST00000258499 ZNF780AO75290 641 aaPredicted RBP4.41□□□□□ -1.7
USP44-201ENST00000258499 RFPL3O75679 317 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 SCO1O75880 301 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 GNRH1P01148 92 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 IFNA7P01567 189 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 EIF4EP06730 217 aaKnown RBP4.41□□□□□ -1.7
USP44-201ENST00000258499 FBXO45P0C2W1 286 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 F3P13726 295 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 FPR3P25089 353 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 LCN1P31025 176 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 OR3A3P47888 321 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms