RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 C3orf30Q96M34 536 aa18.81■□□□□ 0.6
NEDD8-201ENST00000250495 C1orf50Q9BV19 199 aa18.81■□□□□ 0.6
NEDD8-201ENST00000250495 CXorf36Q9H7Y0 433 aa18.81■□□□□ 0.6
NEDD8-201ENST00000250495 ZDHHC2Q9UIJ5 367 aa18.81■□□□□ 0.6
NEDD8-201ENST00000250495 ACTL7BQ9Y614 415 aa18.81■□□□□ 0.6
NEDD8-201ENST00000250495 GPC6Q9Y625 555 aaPredicted RBP18.81■□□□□ 0.6
NEDD8-201ENST00000250495 ZNF195O14628 629 aa18.8■□□□□ 0.6
NEDD8-201ENST00000250495 CFLARO15519 480 aa18.8■□□□□ 0.6
NEDD8-201ENST00000250495 C6orf47O95873 294 aa18.8■□□□□ 0.6
NEDD8-201ENST00000250495 PSMB1P20618 241 aaKnown RBP18.8■□□□□ 0.6
NEDD8-201ENST00000250495 AGTR1P30556 359 aa18.8■□□□□ 0.6
NEDD8-201ENST00000250495 FOXF1Q12946 379 aa18.8■□□□□ 0.6
NEDD8-201ENST00000250495 RNPS1Q15287 305 aaKnown RBP18.8■□□□□ 0.6
NEDD8-201ENST00000250495 DCST2Q5T1A1 773 aa18.8■□□□□ 0.6
NEDD8-201ENST00000250495 BHLHB9Q6PI77 547 aa18.8■□□□□ 0.6
NEDD8-201ENST00000250495 CBLN3Q6UW01 205 aa18.8■□□□□ 0.6
NEDD8-201ENST00000250495 YTHDF3Q7Z739 585 aaKnown RBP18.8■□□□□ 0.6
NEDD8-201ENST00000250495 FBXO27Q8NI29 283 aa18.8■□□□□ 0.6
NEDD8-201ENST00000250495 SFXN5Q8TD22 340 aa18.8■□□□□ 0.6
NEDD8-201ENST00000250495 PERPQ96FX8 193 aa18.8■□□□□ 0.6
NEDD8-201ENST00000250495 Q96MF0 132 aa18.8■□□□□ 0.6
NEDD8-201ENST00000250495 KLHDC3Q9BQ90 382 aa18.8■□□□□ 0.6
NEDD8-201ENST00000250495 HDHD5Q9BXW7 423 aa18.8■□□□□ 0.6
NEDD8-201ENST00000250495 BHLHE41Q9C0J9 482 aaPredicted RBP18.8■□□□□ 0.6
NEDD8-201ENST00000250495 ACTR6Q9GZN1 396 aa18.8■□□□□ 0.6
NEDD8-201ENST00000250495 C12orf49Q9H741 205 aa18.8■□□□□ 0.6
NEDD8-201ENST00000250495 GPATCH2Q9NW75 528 aa18.8■□□□□ 0.6
NEDD8-201ENST00000250495 ICAM5Q9UMF0 924 aa18.8■□□□□ 0.6
NEDD8-201ENST00000250495 CARD8Q9Y2G2 431 aa18.8■□□□□ 0.6
NEDD8-201ENST00000250495 DTNAQ9Y4J8 743 aa18.8■□□□□ 0.6
NEDD8-201ENST00000250495 HEXAP06865 529 aa18.79■□□□□ 0.6
NEDD8-201ENST00000250495 MAD2L1Q13257 205 aaPredicted RBP18.79■□□□□ 0.6
NEDD8-201ENST00000250495 ZNF239Q16600 458 aaKnown RBP18.79■□□□□ 0.6
NEDD8-201ENST00000250495 TMEM176BQ3YBM2 270 aaPredicted RBP18.79■□□□□ 0.6
NEDD8-201ENST00000250495 HDXQ7Z353 690 aa18.79■□□□□ 0.6
NEDD8-201ENST00000250495 STEAP2Q8NFT2 490 aa18.79■□□□□ 0.6
NEDD8-201ENST00000250495 GPR119Q8TDV5 335 aa18.79■□□□□ 0.6
NEDD8-201ENST00000250495 RNF128Q8TEB7 428 aa18.79■□□□□ 0.6
NEDD8-201ENST00000250495 TUBGCP3Q96CW5 907 aa18.79■□□□□ 0.6
NEDD8-201ENST00000250495 DUSP26Q9BV47 211 aa18.79■□□□□ 0.6
NEDD8-201ENST00000250495 GSX2Q9BZM3 304 aa18.79■□□□□ 0.6
NEDD8-201ENST00000250495 GP6Q9HCN6 339 aa18.79■□□□□ 0.6
NEDD8-201ENST00000250495 KCNE3Q9Y6H6 103 aa18.79■□□□□ 0.6
NEDD8-201ENST00000250495 RAI1Q7Z5J4 1906 aaPredicted RBP18.78■□□□□ 0.6
NEDD8-201ENST00000250495 NPIPA5A0A0B4J1W7 369 aa18.78■□□□□ 0.6
NEDD8-201ENST00000250495 DUXAA6NLW8 204 aa18.78■□□□□ 0.6
NEDD8-201ENST00000250495 NPIPA7E9PJI5 369 aa18.78■□□□□ 0.6
NEDD8-201ENST00000250495 EFNA2O43921 213 aa18.78■□□□□ 0.6
NEDD8-201ENST00000250495 SKAP2O75563 359 aaPredicted RBP18.78■□□□□ 0.6
NEDD8-201ENST00000250495 PRKD3O94806 890 aa18.78■□□□□ 0.6
NEDD8-201ENST00000250495 NPIPA8P0DM63 369 aa18.78■□□□□ 0.6
NEDD8-201ENST00000250495 SHC1P29353 583 aa18.78■□□□□ 0.6
NEDD8-201ENST00000250495 ZNF704Q6ZNC4 412 aaPredicted RBP18.78■□□□□ 0.6
NEDD8-201ENST00000250495 WFDC8Q8IUA0 241 aa18.78■□□□□ 0.6
NEDD8-201ENST00000250495 RIMKLAQ8IXN7 391 aa18.78■□□□□ 0.6
NEDD8-201ENST00000250495 KRTCAP2Q8N6L1 136 aa18.78■□□□□ 0.6
NEDD8-201ENST00000250495 PPP1R14CQ8TAE6 165 aa18.78■□□□□ 0.6
NEDD8-201ENST00000250495 TMEM171Q8WVE6 324 aa18.78■□□□□ 0.6
NEDD8-201ENST00000250495 ARL8AQ96BM9 186 aa18.78■□□□□ 0.6
NEDD8-201ENST00000250495 PLPPR2Q96GM1 343 aa18.78■□□□□ 0.6
NEDD8-201ENST00000250495 COX4I2Q96KJ9 171 aa18.78■□□□□ 0.6
NEDD8-201ENST00000250495 MRGPRX4Q96LA9 322 aa18.78■□□□□ 0.6
NEDD8-201ENST00000250495 OR7D2Q96RA2 312 aa18.78■□□□□ 0.6
NEDD8-201ENST00000250495 NPIPB9F8W1W9 429 aa18.77■□□□□ 0.6
NEDD8-201ENST00000250495 H7C1Q1 480 aa18.77■□□□□ 0.6
NEDD8-201ENST00000250495 OIP5O43482 229 aa18.77■□□□□ 0.6
NEDD8-201ENST00000250495 EIF4E2O60573 245 aaKnown RBP18.77■□□□□ 0.6
NEDD8-201ENST00000250495 TMCC2O75069 709 aa18.77■□□□□ 0.6
NEDD8-201ENST00000250495 BPGMP07738 259 aa18.77■□□□□ 0.6
NEDD8-201ENST00000250495 NID1P14543 1247 aa18.77■□□□□ 0.6
NEDD8-201ENST00000250495 PRKCAP17252 672 aa18.77■□□□□ 0.6
NEDD8-201ENST00000250495 ARRB2P32121 409 aa18.77■□□□□ 0.6
NEDD8-201ENST00000250495 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.77■□□□□ 0.6
NEDD8-201ENST00000250495 FCRLAQ7L513 359 aa18.77■□□□□ 0.6
NEDD8-201ENST00000250495 TUSC5Q8IXB3 177 aa18.77■□□□□ 0.6
NEDD8-201ENST00000250495 SLC43A2Q8N370 569 aa18.77■□□□□ 0.6
NEDD8-201ENST00000250495 ZNF614Q8N883 585 aa18.77■□□□□ 0.6
NEDD8-201ENST00000250495 TOR1AIP2Q8NFQ8 470 aa18.77■□□□□ 0.6
NEDD8-201ENST00000250495 ABHD3Q8WU67 409 aa18.77■□□□□ 0.6
NEDD8-201ENST00000250495 NUDT8Q8WV74 236 aa18.77■□□□□ 0.6
NEDD8-201ENST00000250495 SDF2Q99470 211 aa18.77■□□□□ 0.6
NEDD8-201ENST00000250495 VIPAS39Q9H9C1 493 aa18.77■□□□□ 0.6
NEDD8-201ENST00000250495 KLHL13Q9P2N7 655 aa18.77■□□□□ 0.6
NEDD8-201ENST00000250495 ZNF264O43296 627 aa18.76■□□□□ 0.59
NEDD8-201ENST00000250495 LY6G6DO95868 133 aa18.76■□□□□ 0.59
NEDD8-201ENST00000250495 YES1P07947 543 aa18.76■□□□□ 0.59
NEDD8-201ENST00000250495 G6PDP11413 515 aa18.76■□□□□ 0.59
NEDD8-201ENST00000250495 PTH2RP49190 550 aa18.76■□□□□ 0.59
NEDD8-201ENST00000250495 CLDN8P56748 225 aa18.76■□□□□ 0.59
NEDD8-201ENST00000250495 C21orf58P58505 322 aa18.76■□□□□ 0.59
NEDD8-201ENST00000250495 HBA1P69905 142 aa18.76■□□□□ 0.59
NEDD8-201ENST00000250495 EMX2Q04743 252 aa18.76■□□□□ 0.59
NEDD8-201ENST00000250495 TOMM34Q15785 309 aaPredicted RBP18.76■□□□□ 0.59
NEDD8-201ENST00000250495 NUDCD3Q8IVD9 361 aa18.76■□□□□ 0.59
NEDD8-201ENST00000250495 ATP6V1C2Q8NEY4 427 aa18.76■□□□□ 0.59
NEDD8-201ENST00000250495 OR5W2Q8NH69 310 aa18.76■□□□□ 0.59
NEDD8-201ENST00000250495 ZFP90Q8TF47 636 aa18.76■□□□□ 0.59
NEDD8-201ENST00000250495 ARSGQ96EG1 525 aa18.76■□□□□ 0.59
NEDD8-201ENST00000250495 ZIM3Q96PE6 472 aa18.76■□□□□ 0.59
NEDD8-201ENST00000250495 TACO1Q9BSH4 297 aaKnown RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms