RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 PRODH2Q9UF12 536 aa12.36□□□□□ -0.43
DDX39A-201ENST00000242776 BAIAP2L1Q9UHR4 511 aa12.36□□□□□ -0.43
DDX39A-201ENST00000242776 CES1P1Q9UKY3 287 aa12.36□□□□□ -0.43
DDX39A-201ENST00000242776 PSME2Q9UL46 239 aa12.36□□□□□ -0.43
DDX39A-201ENST00000242776 GPR55Q9Y2T6 319 aaPredicted RBP12.36□□□□□ -0.43
DDX39A-201ENST00000242776 SCAMP2O15127 329 aaKnown RBP12.35□□□□□ -0.43
DDX39A-201ENST00000242776 SLC22A2O15244 555 aa12.35□□□□□ -0.43
DDX39A-201ENST00000242776 AKAP10O43572 662 aa12.35□□□□□ -0.43
DDX39A-201ENST00000242776 CD5LO43866 347 aa12.35□□□□□ -0.43
DDX39A-201ENST00000242776 TSPAN2O60636 221 aa12.35□□□□□ -0.43
DDX39A-201ENST00000242776 ADAM11O75078 769 aa12.35□□□□□ -0.43
DDX39A-201ENST00000242776 NDUFS7O75251 213 aa12.35□□□□□ -0.43
DDX39A-201ENST00000242776 SLC22A3O75751 556 aa12.35□□□□□ -0.43
DDX39A-201ENST00000242776 PLGP00747 810 aaPredicted RBP12.35□□□□□ -0.43
DDX39A-201ENST00000242776 OPN1LWP04000 364 aa12.35□□□□□ -0.43
DDX39A-201ENST00000242776 ATP1B1P05026 303 aa12.35□□□□□ -0.43
DDX39A-201ENST00000242776 IDUAP35475 653 aa12.35□□□□□ -0.43
DDX39A-201ENST00000242776 SLC6A8P48029 635 aa12.35□□□□□ -0.43
DDX39A-201ENST00000242776 EEFSECP57772 596 aaKnown RBP12.35□□□□□ -0.43
DDX39A-201ENST00000242776 C21orf58P58505 322 aa12.35□□□□□ -0.43
DDX39A-201ENST00000242776 NPSR1Q6W5P4 371 aa12.35□□□□□ -0.43
DDX39A-201ENST00000242776 STAC2Q6ZMT1 411 aa12.35□□□□□ -0.43
DDX39A-201ENST00000242776 FAM214BQ7L5A3 538 aa12.35□□□□□ -0.43
DDX39A-201ENST00000242776 CCDC116Q8IYX3 515 aa12.35□□□□□ -0.43
DDX39A-201ENST00000242776 ZNF619Q8N2I2 560 aa12.35□□□□□ -0.43
DDX39A-201ENST00000242776 NATD1Q8N6N6 113 aa12.35□□□□□ -0.43
DDX39A-201ENST00000242776 OR2M3Q8NG83 312 aa12.35□□□□□ -0.43
DDX39A-201ENST00000242776 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.35□□□□□ -0.43
DDX39A-201ENST00000242776 GFM2Q969S9 779 aaKnown RBP12.35□□□□□ -0.43
DDX39A-201ENST00000242776 DTNBP1Q96EV8 351 aa12.35□□□□□ -0.43
DDX39A-201ENST00000242776 CNRIP1Q96F85 164 aaPredicted RBP12.35□□□□□ -0.43
DDX39A-201ENST00000242776 TRMT61AQ96FX7 289 aaKnown RBP12.35□□□□□ -0.43
DDX39A-201ENST00000242776 ZNF764Q96H86 408 aaPredicted RBP12.35□□□□□ -0.43
DDX39A-201ENST00000242776 EGLN2Q96KS0 407 aa12.35□□□□□ -0.43
DDX39A-201ENST00000242776 ACTR6Q9GZN1 396 aa12.35□□□□□ -0.43
DDX39A-201ENST00000242776 ZNF385DQ9H6B1 395 aa12.35□□□□□ -0.43
DDX39A-201ENST00000242776 GIMAP4Q9NUV9 329 aa12.35□□□□□ -0.43
DDX39A-201ENST00000242776 ATAD3AQ9NVI7 634 aa12.35□□□□□ -0.43
DDX39A-201ENST00000242776 ZNF780BQ9Y6R6 833 aa12.35□□□□□ -0.43
DDX39A-201ENST00000242776 OR2M5A3KFT3 312 aa12.34□□□□□ -0.43
DDX39A-201ENST00000242776 TO15178 435 aa12.34□□□□□ -0.43
DDX39A-201ENST00000242776 GPRIN2O60269 458 aa12.34□□□□□ -0.43
DDX39A-201ENST00000242776 TNFRSF21O75509 655 aa12.34□□□□□ -0.43
DDX39A-201ENST00000242776 SOD3P08294 240 aa12.34□□□□□ -0.43
DDX39A-201ENST00000242776 RFX3P48380 749 aa12.34□□□□□ -0.43
DDX39A-201ENST00000242776 PCYT1AP49585 367 aa12.34□□□□□ -0.43
DDX39A-201ENST00000242776 GAS1P54826 345 aa12.34□□□□□ -0.43
DDX39A-201ENST00000242776 CTBP2P56545 445 aa12.34□□□□□ -0.43
DDX39A-201ENST00000242776 NME5P56597 212 aa12.34□□□□□ -0.43
DDX39A-201ENST00000242776 UFM1P61960 85 aa12.34□□□□□ -0.43
DDX39A-201ENST00000242776 EFR3AQ14156 821 aa12.34□□□□□ -0.43
DDX39A-201ENST00000242776 MAPRE2Q15555 327 aa12.34□□□□□ -0.43
DDX39A-201ENST00000242776 TSC22D1Q15714 1073 aa12.34□□□□□ -0.43
DDX39A-201ENST00000242776 MTDHQ86UE4 582 aaKnown RBP12.34□□□□□ -0.43
DDX39A-201ENST00000242776 SLC44A2Q8IWA5 706 aaPredicted RBP12.34□□□□□ -0.43
DDX39A-201ENST00000242776 SAMD14Q8IZD0 417 aaPredicted RBP12.34□□□□□ -0.43
DDX39A-201ENST00000242776 OR9A2Q8NGT5 310 aa12.34□□□□□ -0.43
DDX39A-201ENST00000242776 TESCQ96BS2 214 aa12.34□□□□□ -0.43
DDX39A-201ENST00000242776 PPCDCQ96CD2 204 aa12.34□□□□□ -0.43
DDX39A-201ENST00000242776 SLC35A4Q96G79 324 aa12.34□□□□□ -0.43
DDX39A-201ENST00000242776 LRRC37BQ96QE4 947 aa12.34□□□□□ -0.43
DDX39A-201ENST00000242776 NMUR2Q9GZQ4 415 aa12.34□□□□□ -0.43
DDX39A-201ENST00000242776 C12orf49Q9H741 205 aa12.34□□□□□ -0.43
DDX39A-201ENST00000242776 SAR1AQ9NR31 198 aa12.34□□□□□ -0.43
DDX39A-201ENST00000242776 LIPT1Q9Y234 373 aa12.34□□□□□ -0.43
DDX39A-201ENST00000242776 EMC9Q9Y3B6 208 aa12.34□□□□□ -0.43
DDX39A-201ENST00000242776 MRPS18CQ9Y3D5 142 aaKnown RBP12.34□□□□□ -0.43
DDX39A-201ENST00000242776 OR10H1Q9Y4A9 318 aa12.34□□□□□ -0.43
DDX39A-201ENST00000242776 MAGED1Q9Y5V3 778 aaPredicted RBP12.34□□□□□ -0.43
DDX39A-201ENST00000242776 CAPN7Q9Y6W3 813 aa12.34□□□□□ -0.43
DDX39A-201ENST00000242776 ALPK2Q86TB3 2170 aa12.34□□□□□ -0.43
DDX39A-201ENST00000242776 FAM234BA2RU67 622 aa12.34□□□□□ -0.43
DDX39A-201ENST00000242776 A8MV72 311 aaPredicted RBP12.34□□□□□ -0.43
DDX39A-201ENST00000242776 EIF1AYO14602 144 aaKnown RBP12.34□□□□□ -0.43
DDX39A-201ENST00000242776 ANKRD28O15084 1053 aa12.34□□□□□ -0.43
DDX39A-201ENST00000242776 TLX2O43763 284 aaPredicted RBP12.34□□□□□ -0.43
DDX39A-201ENST00000242776 TBX19O60806 448 aa12.34□□□□□ -0.43
DDX39A-201ENST00000242776 NTN1O95631 604 aa12.34□□□□□ -0.43
DDX39A-201ENST00000242776 CT45A8P0DMV1 189 aa12.34□□□□□ -0.43
DDX39A-201ENST00000242776 CT45A9P0DMV2 189 aa12.34□□□□□ -0.43
DDX39A-201ENST00000242776 PTNP21246 168 aa12.34□□□□□ -0.43
DDX39A-201ENST00000242776 EVI2BP34910 448 aa12.34□□□□□ -0.43
DDX39A-201ENST00000242776 EIF1AXP47813 144 aaKnown RBP12.34□□□□□ -0.43
DDX39A-201ENST00000242776 RPS3AP61247 264 aaKnown RBP12.34□□□□□ -0.43
DDX39A-201ENST00000242776 PDE7AQ13946 482 aa12.34□□□□□ -0.43
DDX39A-201ENST00000242776 CT45A2Q5DJT8 189 aa12.34□□□□□ -0.43
DDX39A-201ENST00000242776 ATG4DQ86TL0 474 aaPredicted RBP12.34□□□□□ -0.43
DDX39A-201ENST00000242776 RIMKLAQ8IXN7 391 aa12.34□□□□□ -0.43
DDX39A-201ENST00000242776 LILRB1Q8NHL6 650 aaPredicted RBP12.34□□□□□ -0.43
DDX39A-201ENST00000242776 RTN4RQ9BZR6 473 aa12.34□□□□□ -0.43
DDX39A-201ENST00000242776 SLCO5A1Q9H2Y9 848 aa12.34□□□□□ -0.43
DDX39A-201ENST00000242776 CCDC167Q9P0B6 97 aa12.34□□□□□ -0.43
DDX39A-201ENST00000242776 SH3BP4Q9P0V3 963 aa12.34□□□□□ -0.43
DDX39A-201ENST00000242776 ATP6V1HQ9UI12 483 aa12.34□□□□□ -0.43
DDX39A-201ENST00000242776 GDF2Q9UK05 429 aaPredicted RBP12.34□□□□□ -0.43
DDX39A-201ENST00000242776 UTS2RQ9UKP6 389 aa12.34□□□□□ -0.43
DDX39A-201ENST00000242776 IL6P05231 212 aa12.33□□□□□ -0.44
DDX39A-201ENST00000242776 NTSP30990 170 aa12.33□□□□□ -0.44
DDX39A-201ENST00000242776 POLR2JP52435 117 aaKnown RBP12.33□□□□□ -0.44
DDX39A-201ENST00000242776 ZNF155Q12901 538 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms