RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 OR10H3O60404 316 aa12.14□□□□□ -0.47
MSH2-201ENST00000233146 GUCA1CO95843 209 aa12.14□□□□□ -0.47
MSH2-201ENST00000233146 HOXB5P09067 269 aa12.14□□□□□ -0.47
MSH2-201ENST00000233146 VSIG10L2P0DP72 767 aa12.14□□□□□ -0.47
MSH2-201ENST00000233146 HOXA5P20719 270 aa12.14□□□□□ -0.47
MSH2-201ENST00000233146 AVPR2P30518 371 aa12.14□□□□□ -0.47
MSH2-201ENST00000233146 MNDAP41218 407 aa12.14□□□□□ -0.47
MSH2-201ENST00000233146 GIPRP48546 466 aa12.14□□□□□ -0.47
MSH2-201ENST00000233146 CDKN1CP49918 316 aaPredicted RBP12.14□□□□□ -0.47
MSH2-201ENST00000233146 RENBPP51606 427 aa12.14□□□□□ -0.47
MSH2-201ENST00000233146 LIM2P55344 173 aa12.14□□□□□ -0.47
MSH2-201ENST00000233146 INPP5JQ15735 1006 aaPredicted RBP12.14□□□□□ -0.47
MSH2-201ENST00000233146 DNLZQ5SXM8 178 aa12.14□□□□□ -0.47
MSH2-201ENST00000233146 PGBD2Q6P3X8 592 aa12.14□□□□□ -0.47
MSH2-201ENST00000233146 ESPNLQ6ZVH7 1005 aa12.14□□□□□ -0.47
MSH2-201ENST00000233146 C6orf120Q7Z4R8 191 aa12.14□□□□□ -0.47
MSH2-201ENST00000233146 CCDC54Q8NEL0 328 aa12.14□□□□□ -0.47
MSH2-201ENST00000233146 OR10J5Q8NHC4 309 aa12.14□□□□□ -0.47
MSH2-201ENST00000233146 SPRYD4Q8WW59 207 aaPredicted RBP12.14□□□□□ -0.47
MSH2-201ENST00000233146 XAGE5Q8WWM1 108 aa12.14□□□□□ -0.47
MSH2-201ENST00000233146 ARL11Q969Q4 196 aa12.14□□□□□ -0.47
MSH2-201ENST00000233146 ASB16Q96NS5 453 aa12.14□□□□□ -0.47
MSH2-201ENST00000233146 TAAR9Q96RI9 348 aa12.14□□□□□ -0.47
MSH2-201ENST00000233146 TRMT61BQ9BVS5 477 aaKnown RBP12.14□□□□□ -0.47
MSH2-201ENST00000233146 TMEM185BQ9H7F4 350 aa12.14□□□□□ -0.47
MSH2-201ENST00000233146 MVB12BQ9H7P6 319 aa12.14□□□□□ -0.47
MSH2-201ENST00000233146 GPATCH2Q9NW75 528 aa12.14□□□□□ -0.47
MSH2-201ENST00000233146 KANTRA0A1W2PQU2 76 aa12.14□□□□□ -0.47
MSH2-201ENST00000233146 TRBC2A0A5B9 178 aa12.14□□□□□ -0.47
MSH2-201ENST00000233146 UBE2QL1A1L167 161 aa12.14□□□□□ -0.47
MSH2-201ENST00000233146 E7EQ34 232 aa12.14□□□□□ -0.47
MSH2-201ENST00000233146 GOSR2O14653 212 aa12.14□□□□□ -0.47
MSH2-201ENST00000233146 FGF10O15520 208 aaPredicted RBP12.14□□□□□ -0.47
MSH2-201ENST00000233146 IFNA2P01563 188 aa12.14□□□□□ -0.47
MSH2-201ENST00000233146 IFNW1P05000 195 aa12.14□□□□□ -0.47
MSH2-201ENST00000233146 SLC2A1P11166 492 aa12.14□□□□□ -0.47
MSH2-201ENST00000233146 LAMP1P11279 417 aa12.14□□□□□ -0.47
MSH2-201ENST00000233146 COX7A2P14406 83 aa12.14□□□□□ -0.47
MSH2-201ENST00000233146 STAT5AP42229 794 aa12.14□□□□□ -0.47
MSH2-201ENST00000233146 F2RL1P55085 397 aa12.14□□□□□ -0.47
MSH2-201ENST00000233146 FZD5Q13467 585 aa12.14□□□□□ -0.47
MSH2-201ENST00000233146 SCARB2Q14108 478 aa12.14□□□□□ -0.47
MSH2-201ENST00000233146 CLINT1Q14677 625 aa12.14□□□□□ -0.47
MSH2-201ENST00000233146 NOXRED1Q6NXP6 359 aa12.14□□□□□ -0.47
MSH2-201ENST00000233146 CLEC20AQ6ZU45 233 aa12.14□□□□□ -0.47
MSH2-201ENST00000233146 PAQR9Q6ZVX9 377 aa12.14□□□□□ -0.47
MSH2-201ENST00000233146 SLC36A1Q7Z2H8 476 aa12.14□□□□□ -0.47
MSH2-201ENST00000233146 ARRDC2Q8TBH0 407 aa12.14□□□□□ -0.47
MSH2-201ENST00000233146 APOLD1Q96LR9 279 aa12.14□□□□□ -0.47
MSH2-201ENST00000233146 TEFMQ96QE5 360 aaKnown RBP12.14□□□□□ -0.47
MSH2-201ENST00000233146 MRPL42Q9Y6G3 142 aaKnown RBP12.14□□□□□ -0.47
MSH2-201ENST00000233146 LTBP4Q8N2S1 1624 aa12.13□□□□□ -0.47
MSH2-201ENST00000233146 H7C0S8 307 aa12.13□□□□□ -0.47
MSH2-201ENST00000233146 BCL2L11O43521 198 aa12.13□□□□□ -0.47
MSH2-201ENST00000233146 INHAP05111 366 aa12.13□□□□□ -0.47
MSH2-201ENST00000233146 SERPIND1P05546 499 aa12.13□□□□□ -0.47
MSH2-201ENST00000233146 PIRTP0C851 137 aa12.13□□□□□ -0.47
MSH2-201ENST00000233146 C1GALT1C1LP0DN25 315 aa12.13□□□□□ -0.47
MSH2-201ENST00000233146 EPXP11678 715 aa12.13□□□□□ -0.47
MSH2-201ENST00000233146 CD79AP11912 226 aa12.13□□□□□ -0.47
MSH2-201ENST00000233146 ELAVL4P26378 380 aaKnown RBP12.13□□□□□ -0.47
MSH2-201ENST00000233146 CRABP1P29762 137 aa12.13□□□□□ -0.47
MSH2-201ENST00000233146 OPRD1P41143 372 aa12.13□□□□□ -0.47
MSH2-201ENST00000233146 DGKGP49619 791 aa12.13□□□□□ -0.47
MSH2-201ENST00000233146 SLC10A7Q0GE19 358 aa12.13□□□□□ -0.47
MSH2-201ENST00000233146 COTL1Q14019 142 aa12.13□□□□□ -0.47
MSH2-201ENST00000233146 CPSF6Q16630 551 aaKnown RBP eCLIP12.13□□□□□ -0.47
MSH2-201ENST00000233146 COX20Q5RI15 118 aa12.13□□□□□ -0.47
MSH2-201ENST00000233146 AADACL4Q5VUY2 407 aa12.13□□□□□ -0.47
MSH2-201ENST00000233146 OLFML2AQ68BL7 652 aa12.13□□□□□ -0.47
MSH2-201ENST00000233146 SCD5Q86SK9 330 aa12.13□□□□□ -0.47
MSH2-201ENST00000233146 OR4D9Q8NGE8 314 aa12.13□□□□□ -0.47
MSH2-201ENST00000233146 NFKBIDQ8NI38 313 aa12.13□□□□□ -0.47
MSH2-201ENST00000233146 ASB13Q8WXK3 278 aa12.13□□□□□ -0.47
MSH2-201ENST00000233146 SLC22A18Q96BI1 424 aa12.13□□□□□ -0.47
MSH2-201ENST00000233146 PKP4Q99569 1192 aa12.13□□□□□ -0.47
MSH2-201ENST00000233146 NRIP2Q9BQI9 281 aa12.13□□□□□ -0.47
MSH2-201ENST00000233146 RHBGQ9H310 441 aa12.13□□□□□ -0.47
MSH2-201ENST00000233146 NLE1Q9NVX2 485 aaPredicted RBP12.13□□□□□ -0.47
MSH2-201ENST00000233146 GLTPD2A6NH11 291 aa12.13□□□□□ -0.47
MSH2-201ENST00000233146 EMC8O43402 210 aa12.13□□□□□ -0.47
MSH2-201ENST00000233146 NDUFB6O95139 128 aa12.13□□□□□ -0.47
MSH2-201ENST00000233146 AMD1P17707 334 aa12.13□□□□□ -0.47
MSH2-201ENST00000233146 RAC1P63000 192 aa12.13□□□□□ -0.47
MSH2-201ENST00000233146 CDK5Q00535 292 aa12.13□□□□□ -0.47
MSH2-201ENST00000233146 ZNF791Q3KP31 576 aaPredicted RBP12.13□□□□□ -0.47
MSH2-201ENST00000233146 AARDQ4LEZ3 155 aa12.13□□□□□ -0.47
MSH2-201ENST00000233146 DCST1Q5T197 706 aa12.13□□□□□ -0.47
MSH2-201ENST00000233146 TMEM244Q5VVB8 128 aa12.13□□□□□ -0.47
MSH2-201ENST00000233146 TSSK4Q6SA08 328 aa12.13□□□□□ -0.47
MSH2-201ENST00000233146 SLC36A4Q6YBV0 504 aa12.13□□□□□ -0.47
MSH2-201ENST00000233146 CTU1Q7Z7A3 348 aaKnown RBP12.13□□□□□ -0.47
MSH2-201ENST00000233146 POGLUT1Q8NBL1 392 aa12.13□□□□□ -0.47
MSH2-201ENST00000233146 TTC16Q8NEE8 873 aa12.13□□□□□ -0.47
MSH2-201ENST00000233146 OR1J4Q8NGS1 313 aa12.13□□□□□ -0.47
MSH2-201ENST00000233146 CDCA3Q99618 268 aaPredicted RBP12.13□□□□□ -0.47
MSH2-201ENST00000233146 LINC00597Q9H2U6 94 aa12.13□□□□□ -0.47
MSH2-201ENST00000233146 TMEM231Q9H6L2 316 aa12.13□□□□□ -0.47
MSH2-201ENST00000233146 MRPL17Q9NRX2 175 aaKnown RBP12.13□□□□□ -0.47
MSH2-201ENST00000233146 FAAHO00519 579 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms