RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 DUX4L4P0CJ87 422 aa13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 DUX4L5P0CJ88 424 aa13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 DUX4L6P0CJ89 424 aa13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 DUX4L7P0CJ90 424 aa13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 SULT1A3P0DMM9 295 aa13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 SULT1A4P0DMN0 295 aa13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 NCBP2P52298 156 aaKnown RBP eCLIP13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 PRKCZQ05513 592 aa13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 ASTLQ6HA08 431 aaPredicted RBP13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 CEACAM19Q7Z692 300 aa13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 SLC9B2Q86UD5 537 aa13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 NRMQ8IXM6 262 aa13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 OR5AR1Q8NGP9 310 aa13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 SOCS4Q8WXH5 440 aa13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 COL26A1Q96A83 441 aa13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 ORAI1Q96D31 301 aa13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 MRPS24Q96EL2 167 aaKnown RBP13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 MAN2C1Q9NTJ4 1040 aa13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 KLHL42Q9P2K6 505 aa13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 RPS6KB2Q9UBS0 482 aa13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 DUX4Q9UBX2 424 aa13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 MIOXQ9UGB7 285 aa13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 A0A1W2PS29 197 aa13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 SERTM1A2A2V5 107 aa13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 ARPC1BO15143 372 aaKnown RBP13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 SMAD9O15198 467 aaKnown RBP13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 ANKRD34CP0C6C1 535 aa13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 ATXN8OSP0DMR3 200 aa13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 SPP1P10451 314 aa13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 SNRPBP14678 240 aaKnown RBP13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 S100A11P31949 105 aa13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 ZP1P60852 638 aa13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 FKBP1BP68106 108 aa13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 PDE7AQ13946 482 aa13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 GK2Q14410 553 aaPredicted RBP13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 HLXQ14774 488 aaPredicted RBP13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 MINDY4Q4G0A6 757 aa13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 TBC1D19Q8N5T2 526 aa13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 SIRT6Q8N6T7 355 aa13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 HSD17B8Q92506 261 aa13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 LYSMD1Q96S90 227 aa13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 MED18Q9BUE0 208 aa13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 GPR55Q9Y2T6 319 aaPredicted RBP13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 AP1M2Q9Y6Q5 423 aa13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 ARID1AO14497 2285 aa13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 J3QLW9 94 aa13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 SCAMP1O15126 338 aa13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 OR1F1O43749 312 aa13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 GYPBP06028 91 aa13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 UCHL1P09936 223 aa13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 ZNF19P17023 458 aa13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 CDK5Q00535 292 aa13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 PRAMEF14Q5SWL7 426 aa13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 PRAMEF13Q5VWM6 474 aa13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 SLITRK4Q8IW52 837 aa13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 OR9A1PQ8NGU1 263 aa13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 OR5P2Q8WZ92 322 aa13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 INTS12Q96CB8 462 aaKnown RBP13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 TM4SF18Q96CE8 201 aa13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 SAMD8Q96LT4 415 aa13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 SPHK1Q9NYA1 384 aa13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 NDRG3Q9UGV2 375 aa13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 ARRDC5A6NEK1 342 aa13.19□□□□□ -0.3
PCDHB3-201ENST00000231130 SLC9B1P1A6NJY1 282 aa13.19□□□□□ -0.3
PCDHB3-201ENST00000231130 E9PI62 339 aa13.19□□□□□ -0.3
PCDHB3-201ENST00000231130 CASC3O15234 703 aaKnown RBP13.19□□□□□ -0.3
PCDHB3-201ENST00000231130 FGF2P09038 288 aa13.19□□□□□ -0.3
PCDHB3-201ENST00000231130 FGF9P31371 208 aaPredicted RBP13.19□□□□□ -0.3
PCDHB3-201ENST00000231130 EPHB3P54753 998 aa13.19□□□□□ -0.3
PCDHB3-201ENST00000231130 GAS1P54826 345 aa13.19□□□□□ -0.3
PCDHB3-201ENST00000231130 ZNF155Q12901 538 aaPredicted RBP13.19□□□□□ -0.3
PCDHB3-201ENST00000231130 SMCO1Q147U7 214 aa13.19□□□□□ -0.3
PCDHB3-201ENST00000231130 ZNF311Q5JNZ3 666 aa13.19□□□□□ -0.3
PCDHB3-201ENST00000231130 SLC8B1Q6J4K2 584 aa13.19□□□□□ -0.3
PCDHB3-201ENST00000231130 NHLRC1Q6VVB1 395 aa13.19□□□□□ -0.3
PCDHB3-201ENST00000231130 SERPINA12Q8IW75 414 aa13.19□□□□□ -0.3
PCDHB3-201ENST00000231130 BPIFCQ8NFQ6 507 aa13.19□□□□□ -0.3
PCDHB3-201ENST00000231130 OR4Q3Q8NH05 313 aa13.19□□□□□ -0.3
PCDHB3-201ENST00000231130 THAP6Q8TBB0 222 aa13.19□□□□□ -0.3
PCDHB3-201ENST00000231130 AHSPQ9NZD4 102 aa13.19□□□□□ -0.3
PCDHB3-201ENST00000231130 SPG21Q9NZD8 308 aa13.19□□□□□ -0.3
PCDHB3-201ENST00000231130 NTMQ9P121 344 aa13.19□□□□□ -0.3
PCDHB3-201ENST00000231130 TINAGQ9UJW2 476 aa13.19□□□□□ -0.3
PCDHB3-201ENST00000231130 TRPM7Q96QT4 1865 aa13.19□□□□□ -0.3
PCDHB3-201ENST00000231130 TMEM200CA6NKL6 621 aa13.19□□□□□ -0.3
PCDHB3-201ENST00000231130 TMPRSS11DO60235 418 aa13.19□□□□□ -0.3
PCDHB3-201ENST00000231130 CXCL14O95715 111 aa13.19□□□□□ -0.3
PCDHB3-201ENST00000231130 IGF2P01344 180 aa13.19□□□□□ -0.3
PCDHB3-201ENST00000231130 METAP1P53582 386 aa13.19□□□□□ -0.3
PCDHB3-201ENST00000231130 SMAD2Q15796 467 aaKnown RBP13.19□□□□□ -0.3
PCDHB3-201ENST00000231130 ZNF697Q5TEC3 545 aa13.19□□□□□ -0.3
PCDHB3-201ENST00000231130 C5orf46Q6UWT4 87 aa13.19□□□□□ -0.3
PCDHB3-201ENST00000231130 GSG1LQ6UXU4 331 aa13.19□□□□□ -0.3
PCDHB3-201ENST00000231130 TMUB2Q71RG4 321 aa13.19□□□□□ -0.3
PCDHB3-201ENST00000231130 SPAG16Q8N0X2 631 aa13.19□□□□□ -0.3
PCDHB3-201ENST00000231130 CYB561A3Q8NBI2 242 aa13.19□□□□□ -0.3
PCDHB3-201ENST00000231130 OR1M1Q8NGA1 313 aa13.19□□□□□ -0.3
PCDHB3-201ENST00000231130 OR4D9Q8NGE8 314 aa13.19□□□□□ -0.3
PCDHB3-201ENST00000231130 FBXO17Q96EF6 278 aa13.19□□□□□ -0.3
PCDHB3-201ENST00000231130 WDR77Q9BQA1 342 aaPredicted RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms