RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 GPR155Q7Z3F1 870 aa12.44□□□□□ -0.42
COL1A1-201ENST00000225964 FAM83FQ8NEG4 500 aaPredicted RBP12.44□□□□□ -0.42
COL1A1-201ENST00000225964 CD200R1Q8TD46 325 aa12.44□□□□□ -0.42
COL1A1-201ENST00000225964 ZNF775Q96BV0 537 aaPredicted RBP12.44□□□□□ -0.42
COL1A1-201ENST00000225964 SPIN2AQ99865 258 aa12.44□□□□□ -0.42
COL1A1-201ENST00000225964 SPIN2BQ9BPZ2 258 aa12.44□□□□□ -0.42
COL1A1-201ENST00000225964 FAM234AQ9H0X4 552 aa12.44□□□□□ -0.42
COL1A1-201ENST00000225964 RNASET2O00584 256 aaKnown RBP12.43□□□□□ -0.42
COL1A1-201ENST00000225964 AQP9O43315 295 aa12.43□□□□□ -0.42
COL1A1-201ENST00000225964 SF3A2Q15428 464 aaKnown RBP12.43□□□□□ -0.42
COL1A1-201ENST00000225964 TECPR1Q7Z6L1 1165 aa12.43□□□□□ -0.42
COL1A1-201ENST00000225964 OR7G3Q8NG95 312 aa12.43□□□□□ -0.42
COL1A1-201ENST00000225964 FRZBQ92765 325 aa12.43□□□□□ -0.42
COL1A1-201ENST00000225964 LGALS12Q96DT0 336 aa12.43□□□□□ -0.42
COL1A1-201ENST00000225964 RSPRY1Q96DX4 576 aa12.43□□□□□ -0.42
COL1A1-201ENST00000225964 OR14A2Q96R54 314 aa12.43□□□□□ -0.42
COL1A1-201ENST00000225964 OR7D2Q96RA2 312 aa12.43□□□□□ -0.42
COL1A1-201ENST00000225964 ULBP2Q9BZM5 246 aa12.43□□□□□ -0.42
COL1A1-201ENST00000225964 ACOT13Q9NPJ3 140 aa12.43□□□□□ -0.42
COL1A1-201ENST00000225964 ADAMTS6Q9UKP5 1117 aa12.43□□□□□ -0.42
COL1A1-201ENST00000225964 MAGED1Q9Y5V3 778 aaPredicted RBP12.43□□□□□ -0.42
COL1A1-201ENST00000225964 C12orf71A8MTZ7 269 aa12.43□□□□□ -0.42
COL1A1-201ENST00000225964 DVL2O14641 736 aa12.43□□□□□ -0.42
COL1A1-201ENST00000225964 UGDHO60701 494 aa12.43□□□□□ -0.42
COL1A1-201ENST00000225964 ARHGEF15O94989 841 aa12.43□□□□□ -0.42
COL1A1-201ENST00000225964 CD68P34810 354 aaPredicted RBP12.43□□□□□ -0.42
COL1A1-201ENST00000225964 DCTP40126 519 aa12.43□□□□□ -0.42
COL1A1-201ENST00000225964 ALDH3B1P43353 468 aa12.43□□□□□ -0.42
COL1A1-201ENST00000225964 KIAA1211LQ6NV74 962 aa12.43□□□□□ -0.42
COL1A1-201ENST00000225964 TMEM135Q86UB9 458 aa12.43□□□□□ -0.42
COL1A1-201ENST00000225964 ZNF337Q9Y3M9 751 aa12.43□□□□□ -0.42
COL1A1-201ENST00000225964 NUMBLQ9Y6R0 609 aa12.43□□□□□ -0.42
COL1A1-201ENST00000225964 BLACEA4D250 179 aa12.43□□□□□ -0.42
COL1A1-201ENST00000225964 MEGF11A6BM72 1044 aa12.43□□□□□ -0.42
COL1A1-201ENST00000225964 IGHEP01854 428 aa12.43□□□□□ -0.42
COL1A1-201ENST00000225964 DRD5P21918 477 aa12.43□□□□□ -0.42
COL1A1-201ENST00000225964 PCGF2P35227 344 aa12.43□□□□□ -0.42
COL1A1-201ENST00000225964 HTR5AP47898 357 aa12.43□□□□□ -0.42
COL1A1-201ENST00000225964 RRADP55042 308 aa12.43□□□□□ -0.42
COL1A1-201ENST00000225964 RPL23AP62750 156 aaKnown RBP12.43□□□□□ -0.42
COL1A1-201ENST00000225964 STEAP3Q658P3 488 aa12.43□□□□□ -0.42
COL1A1-201ENST00000225964 LINC00696Q6ZRV3 163 aa12.43□□□□□ -0.42
COL1A1-201ENST00000225964 GPR148Q8TDV2 347 aa12.43□□□□□ -0.42
COL1A1-201ENST00000225964 AMDHD1Q96NU7 426 aa12.43□□□□□ -0.42
COL1A1-201ENST00000225964 BTBD2Q9BX70 525 aa12.43□□□□□ -0.42
COL1A1-201ENST00000225964 CALHM2Q9HA72 323 aa12.43□□□□□ -0.42
COL1A1-201ENST00000225964 NOSIPQ9Y314 301 aaKnown RBP12.43□□□□□ -0.42
COL1A1-201ENST00000225964 DNAJC15Q9Y5T4 150 aa12.43□□□□□ -0.42
COL1A1-201ENST00000225964 DNAJB6O75190 326 aa12.43□□□□□ -0.42
COL1A1-201ENST00000225964 ZIC2O95409 532 aaPredicted RBP12.43□□□□□ -0.42
COL1A1-201ENST00000225964 BDKRB2P30411 391 aa12.43□□□□□ -0.42
COL1A1-201ENST00000225964 SSR4P51571 173 aa12.43□□□□□ -0.42
COL1A1-201ENST00000225964 GABARAPL2P60520 117 aa12.43□□□□□ -0.42
COL1A1-201ENST00000225964 CTBSQ01459 385 aa12.43□□□□□ -0.42
COL1A1-201ENST00000225964 OR8B8Q15620 311 aa12.43□□□□□ -0.42
COL1A1-201ENST00000225964 SLC22A6Q4U2R8 563 aa12.43□□□□□ -0.42
COL1A1-201ENST00000225964 EXOSC6Q5RKV6 272 aaKnown RBP12.43□□□□□ -0.42
COL1A1-201ENST00000225964 AGAP7PQ5VUJ5 663 aa12.43□□□□□ -0.42
COL1A1-201ENST00000225964 AGAP6Q5VW22 663 aa12.43□□□□□ -0.42
COL1A1-201ENST00000225964 SLX4IPQ5VYV7 408 aa12.43□□□□□ -0.42
COL1A1-201ENST00000225964 PTCRAQ6ISU1 281 aaPredicted RBP12.43□□□□□ -0.42
COL1A1-201ENST00000225964 SCML4Q8N228 414 aa12.43□□□□□ -0.42
COL1A1-201ENST00000225964 CHCHD4Q8N4Q1 142 aa12.43□□□□□ -0.42
COL1A1-201ENST00000225964 H1FXQ92522 213 aaKnown RBP12.43□□□□□ -0.42
COL1A1-201ENST00000225964 SLC45A3Q96JT2 553 aa12.43□□□□□ -0.42
COL1A1-201ENST00000225964 AGAP4Q96P64 663 aa12.43□□□□□ -0.42
COL1A1-201ENST00000225964 SELENOWP63302 87 aa12.43□□□□□ -0.42
COL1A1-201ENST00000225964 HOXC5Q00444 222 aa12.43□□□□□ -0.42
COL1A1-201ENST00000225964 PDE7AQ13946 482 aa12.43□□□□□ -0.42
COL1A1-201ENST00000225964 NIPAL3Q6P499 406 aa12.43□□□□□ -0.42
COL1A1-201ENST00000225964 AMIGO3Q86WK7 504 aa12.43□□□□□ -0.42
COL1A1-201ENST00000225964 MMP21Q8N119 569 aa12.43□□□□□ -0.42
COL1A1-201ENST00000225964 MRPL43Q8N983 215 aaKnown RBP12.43□□□□□ -0.42
COL1A1-201ENST00000225964 PTERQ96BW5 349 aa12.43□□□□□ -0.42
COL1A1-201ENST00000225964 ZC3HAV1LQ96H79 300 aaKnown RBP12.43□□□□□ -0.42
COL1A1-201ENST00000225964 SDHAF2Q9NX18 166 aa12.43□□□□□ -0.42
COL1A1-201ENST00000225964 EIF3FO00303 357 aaPredicted RBP12.42□□□□□ -0.42
COL1A1-201ENST00000225964 ICAM2P13598 275 aa12.42□□□□□ -0.42
COL1A1-201ENST00000225964 ARL6IP1Q15041 203 aa12.42□□□□□ -0.42
COL1A1-201ENST00000225964 CCNJQ5T5M9 372 aa12.42□□□□□ -0.42
COL1A1-201ENST00000225964 PRAMEF20Q5VT98 475 aa12.42□□□□□ -0.42
COL1A1-201ENST00000225964 GARNL3Q5VVW2 1013 aa12.42□□□□□ -0.42
COL1A1-201ENST00000225964 FAM43BQ6ZT52 329 aaPredicted RBP12.42□□□□□ -0.42
COL1A1-201ENST00000225964 HTR3DQ70Z44 454 aa12.42□□□□□ -0.42
COL1A1-201ENST00000225964 ISCA2Q86U28 154 aa12.42□□□□□ -0.42
COL1A1-201ENST00000225964 MKXQ8IYA7 352 aa12.42□□□□□ -0.42
COL1A1-201ENST00000225964 CHDHQ8NE62 594 aaPredicted RBP12.42□□□□□ -0.42
COL1A1-201ENST00000225964 OR14K1Q8NGZ2 314 aa12.42□□□□□ -0.42
COL1A1-201ENST00000225964 TCTN2Q96GX1 697 aa12.42□□□□□ -0.42
COL1A1-201ENST00000225964 ZNF334Q9HCZ1 680 aaPredicted RBP12.42□□□□□ -0.42
COL1A1-201ENST00000225964 CLDN17P56750 224 aa12.42□□□□□ -0.42
COL1A1-201ENST00000225964 MRPS21P82921 87 aaKnown RBP12.42□□□□□ -0.42
COL1A1-201ENST00000225964 WBP2NLQ6ICG8 309 aa12.42□□□□□ -0.42
COL1A1-201ENST00000225964 OPN5Q6U736 354 aa12.42□□□□□ -0.42
COL1A1-201ENST00000225964 VRK2Q86Y07 508 aa12.42□□□□□ -0.42
COL1A1-201ENST00000225964 RNF128Q8TEB7 428 aa12.42□□□□□ -0.42
COL1A1-201ENST00000225964 LIN37Q96GY3 246 aaPredicted RBP12.42□□□□□ -0.42
COL1A1-201ENST00000225964 SLC46A2Q9BY10 475 aa12.42□□□□□ -0.42
COL1A1-201ENST00000225964 EMC9Q9Y3B6 208 aa12.42□□□□□ -0.42
COL1A1-201ENST00000225964 PRSS21Q9Y6M0 314 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms