RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 SPHK1Q9NYA1 384 aa17.76■□□□□ 0.43
SMPD3-201ENST00000219334 CREBL2O60519 120 aaPredicted RBP17.76■□□□□ 0.43
SMPD3-201ENST00000219334 RGS6P49758 472 aa17.76■□□□□ 0.43
SMPD3-201ENST00000219334 FXYD4P59646 89 aa17.76■□□□□ 0.43
SMPD3-201ENST00000219334 KCNJ10P78508 379 aa17.76■□□□□ 0.43
SMPD3-201ENST00000219334 ADAMTSL4Q6UY14 1074 aa17.76■□□□□ 0.43
SMPD3-201ENST00000219334 CPT1CQ8TCG5 803 aa17.76■□□□□ 0.43
SMPD3-201ENST00000219334 ACSS1Q9NUB1 689 aaPredicted RBP17.76■□□□□ 0.43
SMPD3-201ENST00000219334 IL37Q9NZH6 218 aa17.76■□□□□ 0.43
SMPD3-201ENST00000219334 MAB21L2Q9Y586 359 aa17.76■□□□□ 0.43
SMPD3-201ENST00000219334 FGL1Q08830 312 aa17.76■□□□□ 0.43
SMPD3-201ENST00000219334 TMEM176BQ3YBM2 270 aaPredicted RBP17.76■□□□□ 0.43
SMPD3-201ENST00000219334 DTWD1Q8N5C7 304 aa17.76■□□□□ 0.43
SMPD3-201ENST00000219334 TOMM40LQ969M1 308 aa17.76■□□□□ 0.43
SMPD3-201ENST00000219334 C1GALT1Q9NS00 363 aa17.76■□□□□ 0.43
SMPD3-201ENST00000219334 MAN2C1Q9NTJ4 1040 aa17.76■□□□□ 0.43
SMPD3-201ENST00000219334 ZFP57Q9NU63 452 aa17.76■□□□□ 0.43
SMPD3-201ENST00000219334 VSX1Q9NZR4 365 aaPredicted RBP17.76■□□□□ 0.43
SMPD3-201ENST00000219334 DNAJB6O75190 326 aa17.75■□□□□ 0.43
SMPD3-201ENST00000219334 DBHP09172 617 aa17.75■□□□□ 0.43
SMPD3-201ENST00000219334 FBXO45P0C2W1 286 aa17.75■□□□□ 0.43
SMPD3-201ENST00000219334 PRSS3P35030 304 aa17.75■□□□□ 0.43
SMPD3-201ENST00000219334 RAB31Q13636 194 aa17.75■□□□□ 0.43
SMPD3-201ENST00000219334 NTRK2Q16620 822 aa17.75■□□□□ 0.43
SMPD3-201ENST00000219334 CTSL3PQ5NE16 218 aa17.75■□□□□ 0.43
SMPD3-201ENST00000219334 PAQR9Q6ZVX9 377 aa17.75■□□□□ 0.43
SMPD3-201ENST00000219334 MGAT4CQ9UBM8 478 aa17.75■□□□□ 0.43
SMPD3-201ENST00000219334 ZNF443Q9Y2A4 671 aaPredicted RBP17.75■□□□□ 0.43
SMPD3-201ENST00000219334 TP53TG5Q9Y2B4 290 aa17.75■□□□□ 0.43
SMPD3-201ENST00000219334 EEF1E1-BLOC1S5C9J1V9 151 aa17.75■□□□□ 0.43
SMPD3-201ENST00000219334 TUBG1P23258 451 aa17.75■□□□□ 0.43
SMPD3-201ENST00000219334 ADH6P28332 368 aa17.75■□□□□ 0.43
SMPD3-201ENST00000219334 LINC00696Q6ZRV3 163 aa17.75■□□□□ 0.43
SMPD3-201ENST00000219334 OR5D14Q8NGL3 314 aa17.75■□□□□ 0.43
SMPD3-201ENST00000219334 ZNF587Q96SQ5 575 aaPredicted RBP17.75■□□□□ 0.43
SMPD3-201ENST00000219334 C1QTNF2Q9BXJ5 285 aa17.75■□□□□ 0.43
SMPD3-201ENST00000219334 ATP13A2Q9NQ11 1180 aa17.75■□□□□ 0.43
SMPD3-201ENST00000219334 MRPL15Q9P015 296 aaKnown RBP17.75■□□□□ 0.43
SMPD3-201ENST00000219334 HS3ST3A1Q9Y663 406 aa17.75■□□□□ 0.43
SMPD3-201ENST00000219334 INHBCP55103 352 aa17.75■□□□□ 0.43
SMPD3-201ENST00000219334 SUN5Q8TC36 379 aa17.75■□□□□ 0.43
SMPD3-201ENST00000219334 COG8Q96MW5 612 aa17.75■□□□□ 0.43
SMPD3-201ENST00000219334 SLC6A18Q96N87 628 aa17.75■□□□□ 0.43
SMPD3-201ENST00000219334 TP63Q9H3D4 680 aaPredicted RBP17.75■□□□□ 0.43
SMPD3-201ENST00000219334 C14orf119Q9NWQ9 140 aa17.75■□□□□ 0.43
SMPD3-201ENST00000219334 CARD8Q9Y2G2 431 aa17.75■□□□□ 0.43
SMPD3-201ENST00000219334 WIF1Q9Y5W5 379 aa17.75■□□□□ 0.43
SMPD3-201ENST00000219334 SETD1AO15047 1707 aaKnown RBP17.75■□□□□ 0.43
SMPD3-201ENST00000219334 A0A0A6YYH2 397 aa17.75■□□□□ 0.43
SMPD3-201ENST00000219334 A0A0G2JMP0 313 aa17.75■□□□□ 0.43
SMPD3-201ENST00000219334 A6NJ64 397 aa17.75■□□□□ 0.43
SMPD3-201ENST00000219334 AIFM1O95831 613 aa17.75■□□□□ 0.43
SMPD3-201ENST00000219334 HOXC5Q00444 222 aa17.75■□□□□ 0.43
SMPD3-201ENST00000219334 GPR50Q13585 617 aa17.75■□□□□ 0.43
SMPD3-201ENST00000219334 C9orf135Q5VTT2 229 aa17.75■□□□□ 0.43
SMPD3-201ENST00000219334 PRSS48Q7RTY5 328 aa17.75■□□□□ 0.43
SMPD3-201ENST00000219334 PXKQ7Z7A4 578 aa17.75■□□□□ 0.43
SMPD3-201ENST00000219334 SYNPOQ8N3V7 929 aa17.75■□□□□ 0.43
SMPD3-201ENST00000219334 OR4M2Q8NGB6 313 aa17.75■□□□□ 0.43
SMPD3-201ENST00000219334 SLC22A12Q96S37 553 aa17.75■□□□□ 0.43
SMPD3-201ENST00000219334 UBE2ZQ9H832 354 aaPredicted RBP17.75■□□□□ 0.43
SMPD3-201ENST00000219334 B3GALT1Q9Y5Z6 326 aa17.75■□□□□ 0.43
SMPD3-201ENST00000219334 SERPINE2P07093 398 aa17.75■□□□□ 0.43
SMPD3-201ENST00000219334 ZNF44P15621 663 aa17.75■□□□□ 0.43
SMPD3-201ENST00000219334 MAGEA6P43360 314 aa17.75■□□□□ 0.43
SMPD3-201ENST00000219334 RPS5P46782 204 aaKnown RBP17.75■□□□□ 0.43
SMPD3-201ENST00000219334 WNT4P56705 351 aa17.75■□□□□ 0.43
SMPD3-201ENST00000219334 CCDC58Q4VC31 144 aa17.75■□□□□ 0.43
SMPD3-201ENST00000219334 PLCXD3Q63HM9 321 aa17.75■□□□□ 0.43
SMPD3-201ENST00000219334 MICU1Q9BPX6 476 aa17.75■□□□□ 0.43
SMPD3-201ENST00000219334 ST14Q9Y5Y6 855 aa17.75■□□□□ 0.43
SMPD3-201ENST00000219334 C2orf72A6NCS6 295 aa17.74■□□□□ 0.43
SMPD3-201ENST00000219334 ZNF264O43296 627 aa17.74■□□□□ 0.43
SMPD3-201ENST00000219334 PTH2RP49190 550 aa17.74■□□□□ 0.43
SMPD3-201ENST00000219334 TAZQ16635 292 aa17.74■□□□□ 0.43
SMPD3-201ENST00000219334 C6orf89Q6UWU4 347 aa17.74■□□□□ 0.43
SMPD3-201ENST00000219334 SMOXQ9NWM0 555 aa17.74■□□□□ 0.43
SMPD3-201ENST00000219334 TMEM265A0A087WTH1 108 aa17.74■□□□□ 0.43
SMPD3-201ENST00000219334 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.74■□□□□ 0.43
SMPD3-201ENST00000219334 ATXN1LP0C7T5 689 aaKnown RBP17.74■□□□□ 0.43
SMPD3-201ENST00000219334 PIP5KL1Q5T9C9 394 aa17.74■□□□□ 0.43
SMPD3-201ENST00000219334 SLC16A14Q7RTX9 510 aa17.74■□□□□ 0.43
SMPD3-201ENST00000219334 OR5W2Q8NH69 310 aa17.74■□□□□ 0.43
SMPD3-201ENST00000219334 CD93Q9NPY3 652 aa17.74■□□□□ 0.43
SMPD3-201ENST00000219334 MYEF2Q9P2K5 600 aaKnown RBP17.74■□□□□ 0.43
SMPD3-201ENST00000219334 ZNF223Q9UK11 482 aaPredicted RBP17.74■□□□□ 0.43
SMPD3-201ENST00000219334 TLCD2A6NGC4 264 aa17.74■□□□□ 0.43
SMPD3-201ENST00000219334 TVP23AA6NH52 213 aa17.74■□□□□ 0.43
SMPD3-201ENST00000219334 CCL11P51671 97 aa17.74■□□□□ 0.43
SMPD3-201ENST00000219334 TNFRSF17Q02223 184 aa17.74■□□□□ 0.43
SMPD3-201ENST00000219334 PRAMEF20Q5VT98 475 aa17.74■□□□□ 0.43
SMPD3-201ENST00000219334 TECPR1Q7Z6L1 1165 aa17.74■□□□□ 0.43
SMPD3-201ENST00000219334 LILRB2Q8N423 598 aa17.74■□□□□ 0.43
SMPD3-201ENST00000219334 ZADH2Q8N4Q0 377 aa17.74■□□□□ 0.43
SMPD3-201ENST00000219334 VAPAQ9P0L0 249 aa17.74■□□□□ 0.43
SMPD3-201ENST00000219334 RHBDD3Q9Y3P4 386 aa17.74■□□□□ 0.43
SMPD3-201ENST00000219334 ABLIM3O94929 683 aa17.74■□□□□ 0.43
SMPD3-201ENST00000219334 ITGB8P26012 769 aa17.74■□□□□ 0.43
SMPD3-201ENST00000219334 AGTR1P30556 359 aa17.74■□□□□ 0.43
SMPD3-201ENST00000219334 MISPQ8IVT2 679 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms