RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 TMEM184AQ6ZMB5 413 aa12.19□□□□□ -0.46
CTNS-201ENST00000046640 COX18Q8N8Q8 333 aa12.19□□□□□ -0.46
CTNS-201ENST00000046640 SLC37A2Q8TED4 501 aa12.19□□□□□ -0.46
CTNS-201ENST00000046640 RSC1A1Q92681 617 aa12.19□□□□□ -0.46
CTNS-201ENST00000046640 FAM131CQ96AQ9 280 aa12.19□□□□□ -0.46
CTNS-201ENST00000046640 PHF21AQ96BD5 680 aa12.19□□□□□ -0.46
CTNS-201ENST00000046640 RIPOR3Q96MK2 946 aa12.19□□□□□ -0.46
CTNS-201ENST00000046640 CCDC3Q9BQI4 270 aa12.19□□□□□ -0.46
CTNS-201ENST00000046640 MTHFD2LQ9H903 347 aaPredicted RBP12.19□□□□□ -0.46
CTNS-201ENST00000046640 CACYBPQ9HB71 228 aaKnown RBP12.19□□□□□ -0.46
CTNS-201ENST00000046640 SF3B6Q9Y3B4 125 aaKnown RBP12.19□□□□□ -0.46
CTNS-201ENST00000046640 SLC22A7Q9Y694 548 aa12.19□□□□□ -0.46
CTNS-201ENST00000046640 PRODHO43272 600 aa12.19□□□□□ -0.46
CTNS-201ENST00000046640 ALAS2P22557 587 aa12.19□□□□□ -0.46
CTNS-201ENST00000046640 EVI2BP34910 448 aa12.19□□□□□ -0.46
CTNS-201ENST00000046640 IFNGR2P38484 337 aa12.19□□□□□ -0.46
CTNS-201ENST00000046640 TSFMP43897 325 aaKnown RBP12.19□□□□□ -0.46
CTNS-201ENST00000046640 GAS1P54826 345 aa12.19□□□□□ -0.46
CTNS-201ENST00000046640 GNG2P59768 71 aa12.19□□□□□ -0.46
CTNS-201ENST00000046640 EFNB1P98172 346 aa12.19□□□□□ -0.46
CTNS-201ENST00000046640 MRPL2Q5T653 305 aaKnown RBP12.19□□□□□ -0.46
CTNS-201ENST00000046640 ABHD13Q7L211 337 aa12.19□□□□□ -0.46
CTNS-201ENST00000046640 CPOQ8IVL8 374 aa12.19□□□□□ -0.46
CTNS-201ENST00000046640 TIGD4Q8IY51 512 aa12.19□□□□□ -0.46
CTNS-201ENST00000046640 OR2L13Q8N349 312 aa12.19□□□□□ -0.46
CTNS-201ENST00000046640 METTL27Q8N6F8 245 aaPredicted RBP12.19□□□□□ -0.46
CTNS-201ENST00000046640 OR9A4Q8NGU2 314 aa12.19□□□□□ -0.46
CTNS-201ENST00000046640 SPRYD4Q8WW59 207 aaPredicted RBP12.19□□□□□ -0.46
CTNS-201ENST00000046640 ACOT11Q8WXI4 607 aaPredicted RBP12.19□□□□□ -0.46
CTNS-201ENST00000046640 TM4SF19Q96DZ7 209 aa12.19□□□□□ -0.46
CTNS-201ENST00000046640 IL21RQ9HBE5 538 aa12.19□□□□□ -0.46
CTNS-201ENST00000046640 C2orf42Q9NWW7 574 aa12.19□□□□□ -0.46
CTNS-201ENST00000046640 CALML5Q9NZT1 146 aa12.19□□□□□ -0.46
CTNS-201ENST00000046640 PHF11Q9UIL8 331 aa12.19□□□□□ -0.46
CTNS-201ENST00000046640 CACNA1IQ9P0X4 2223 aa12.19□□□□□ -0.46
CTNS-201ENST00000046640 SYT5O00445 386 aa12.18□□□□□ -0.46
CTNS-201ENST00000046640 ARHGEF9O43307 516 aa12.18□□□□□ -0.46
CTNS-201ENST00000046640 APBB3O95704 486 aa12.18□□□□□ -0.46
CTNS-201ENST00000046640 SEMA4FO95754 770 aa12.18□□□□□ -0.46
CTNS-201ENST00000046640 PRKAR1AP10644 381 aa12.18□□□□□ -0.46
CTNS-201ENST00000046640 HTR2AP28223 471 aa12.18□□□□□ -0.46
CTNS-201ENST00000046640 PRKAR1BP31321 381 aa12.18□□□□□ -0.46
CTNS-201ENST00000046640 GCGRP47871 477 aa12.18□□□□□ -0.46
CTNS-201ENST00000046640 DCST2Q5T1A1 773 aa12.18□□□□□ -0.46
CTNS-201ENST00000046640 QSOX2Q6ZRP7 698 aa12.18□□□□□ -0.46
CTNS-201ENST00000046640 CAMKVQ8NCB2 501 aa12.18□□□□□ -0.46
CTNS-201ENST00000046640 NT5CQ8TCD5 201 aa12.18□□□□□ -0.46
CTNS-201ENST00000046640 AP3S1Q92572 193 aa12.18□□□□□ -0.46
CTNS-201ENST00000046640 SECISBP2Q96T21 854 aaKnown RBP12.18□□□□□ -0.46
CTNS-201ENST00000046640 GDF15Q99988 308 aa12.18□□□□□ -0.46
CTNS-201ENST00000046640 TTTY10Q9BZA0 68 aa12.18□□□□□ -0.46
CTNS-201ENST00000046640 SLA2Q9H6Q3 261 aa12.18□□□□□ -0.46
CTNS-201ENST00000046640 ISG20L2Q9H9L3 353 aaKnown RBP12.18□□□□□ -0.46
CTNS-201ENST00000046640 MAT2BQ9NZL9 334 aa12.18□□□□□ -0.46
CTNS-201ENST00000046640 PILRAQ9UKJ1 303 aa12.18□□□□□ -0.46
CTNS-201ENST00000046640 WDR87Q6ZQQ6 2873 aa12.18□□□□□ -0.46
CTNS-201ENST00000046640 TRAV6A0A075B6T7 132 aa12.18□□□□□ -0.46
CTNS-201ENST00000046640 C12orf71A8MTZ7 269 aa12.18□□□□□ -0.46
CTNS-201ENST00000046640 B4DGG1 531 aa12.18□□□□□ -0.46
CTNS-201ENST00000046640 GABRPO00591 440 aa12.18□□□□□ -0.46
CTNS-201ENST00000046640 AKT2P31751 481 aa12.18□□□□□ -0.46
CTNS-201ENST00000046640 SLC1A3P43003 542 aa12.18□□□□□ -0.46
CTNS-201ENST00000046640 BNC1Q01954 994 aa12.18□□□□□ -0.46
CTNS-201ENST00000046640 FAM27D1Q5T7N8 215 aa12.18□□□□□ -0.46
CTNS-201ENST00000046640 HEPHL1Q6MZM0 1159 aa12.18□□□□□ -0.46
CTNS-201ENST00000046640 PLBD1Q6P4A8 553 aa12.18□□□□□ -0.46
CTNS-201ENST00000046640 RASSF6Q6ZTQ3 369 aa12.18□□□□□ -0.46
CTNS-201ENST00000046640 CSNK1A1LQ8N752 337 aa12.18□□□□□ -0.46
CTNS-201ENST00000046640 OR4M2Q8NGB6 313 aa12.18□□□□□ -0.46
CTNS-201ENST00000046640 OR4N2Q8NGD1 307 aa12.18□□□□□ -0.46
CTNS-201ENST00000046640 OR51G2Q8NGK0 314 aa12.18□□□□□ -0.46
CTNS-201ENST00000046640 PCNPQ8WW12 178 aaKnown RBP12.18□□□□□ -0.46
CTNS-201ENST00000046640 FGF11Q92914 225 aa12.18□□□□□ -0.46
CTNS-201ENST00000046640 ATF6BQ99941 703 aa12.18□□□□□ -0.46
CTNS-201ENST00000046640 ACOXLQ9NUZ1 547 aa12.18□□□□□ -0.46
CTNS-201ENST00000046640 PTGFRNQ9P2B2 879 aa12.18□□□□□ -0.46
CTNS-201ENST00000046640 HRKO00198 91 aa12.17□□□□□ -0.46
CTNS-201ENST00000046640 OR2B3O76000 313 aa12.17□□□□□ -0.46
CTNS-201ENST00000046640 SMIM10L1P0DMW3 83 aa12.17□□□□□ -0.46
CTNS-201ENST00000046640 LTBRP36941 435 aa12.17□□□□□ -0.46
CTNS-201ENST00000046640 ZNF136P52737 540 aa12.17□□□□□ -0.46
CTNS-201ENST00000046640 KLHL12Q53G59 568 aa12.17□□□□□ -0.46
CTNS-201ENST00000046640 C3orf38Q5JPI3 329 aa12.17□□□□□ -0.46
CTNS-201ENST00000046640 CEP78Q5JTW2 689 aa12.17□□□□□ -0.46
CTNS-201ENST00000046640 KRT74Q7RTS7 529 aa12.17□□□□□ -0.46
CTNS-201ENST00000046640 LINC00471Q8N535 108 aa12.17□□□□□ -0.46
CTNS-201ENST00000046640 SLC37A3Q8NCC5 494 aa12.17□□□□□ -0.46
CTNS-201ENST00000046640 OR51A7Q8NH64 312 aa12.17□□□□□ -0.46
CTNS-201ENST00000046640 SMIM10Q96HG1 83 aa12.17□□□□□ -0.46
CTNS-201ENST00000046640 GPR174Q9BXC1 333 aa12.17□□□□□ -0.46
CTNS-201ENST00000046640 USP36Q9P275 1121 aaKnown RBP12.17□□□□□ -0.46
CTNS-201ENST00000046640 PCOLCE2Q9UKZ9 415 aa12.17□□□□□ -0.46
CTNS-201ENST00000046640 URADA6NGE7 173 aa12.17□□□□□ -0.46
CTNS-201ENST00000046640 GTPBP1O00178 669 aaKnown RBP12.17□□□□□ -0.46
CTNS-201ENST00000046640 SURF4O15260 269 aa12.17□□□□□ -0.46
CTNS-201ENST00000046640 LANCL1O43813 399 aa12.17□□□□□ -0.46
CTNS-201ENST00000046640 ZNF780AO75290 641 aaPredicted RBP12.17□□□□□ -0.46
CTNS-201ENST00000046640 PAHP00439 452 aa12.17□□□□□ -0.46
CTNS-201ENST00000046640 CTSEP14091 401 aa12.17□□□□□ -0.46
CTNS-201ENST00000046640 ST6GAL1P15907 406 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms