RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 ZNF527Q8NB42 609 aa13.18□□□□□ -0.3
RTFDC1-201ENST00000023939 C17orf47Q8NEP4 570 aa13.18□□□□□ -0.3
RTFDC1-201ENST00000023939 OR2T33Q8NG76 320 aa13.18□□□□□ -0.3
RTFDC1-201ENST00000023939 OR4Q3Q8NH05 313 aa13.18□□□□□ -0.3
RTFDC1-201ENST00000023939 CCDC74BQ96LY2 380 aa13.18□□□□□ -0.3
RTFDC1-201ENST00000023939 RACGAP1Q9H0H5 632 aa13.18□□□□□ -0.3
RTFDC1-201ENST00000023939 NXF5Q9H1B4 397 aaKnown RBP13.18□□□□□ -0.3
RTFDC1-201ENST00000023939 EXOSC3Q9NQT5 275 aaKnown RBP13.18□□□□□ -0.3
RTFDC1-201ENST00000023939 RARRES3Q9UL19 164 aa13.18□□□□□ -0.3
RTFDC1-201ENST00000023939 TECTAO75443 2155 aa13.18□□□□□ -0.3
RTFDC1-201ENST00000023939 PI4KAP42356 2102 aa13.18□□□□□ -0.3
RTFDC1-201ENST00000023939 TMX2-CTNND1H3BSU7 103 aa13.17□□□□□ -0.3
RTFDC1-201ENST00000023939 SURF4O15260 269 aa13.17□□□□□ -0.3
RTFDC1-201ENST00000023939 RCBTB2O95199 551 aa13.17□□□□□ -0.3
RTFDC1-201ENST00000023939 BCL10O95999 233 aa13.17□□□□□ -0.3
RTFDC1-201ENST00000023939 ADRA2AP08913 450 aa13.17□□□□□ -0.3
RTFDC1-201ENST00000023939 HBQ1P09105 142 aa13.17□□□□□ -0.3
RTFDC1-201ENST00000023939 CD36P16671 472 aa13.17□□□□□ -0.3
RTFDC1-201ENST00000023939 MAKP20794 623 aa13.17□□□□□ -0.3
RTFDC1-201ENST00000023939 LIPAP38571 399 aa13.17□□□□□ -0.3
RTFDC1-201ENST00000023939 RNF144AP50876 292 aaPredicted RBP13.17□□□□□ -0.3
RTFDC1-201ENST00000023939 DUSP3P51452 185 aaPredicted RBP13.17□□□□□ -0.3
RTFDC1-201ENST00000023939 SPCS2Q15005 226 aa13.17□□□□□ -0.3
RTFDC1-201ENST00000023939 EBPQ15125 230 aaKnown RBP13.17□□□□□ -0.3
RTFDC1-201ENST00000023939 ZNF528Q3MIS6 628 aa13.17□□□□□ -0.3
RTFDC1-201ENST00000023939 KLHL22Q53GT1 634 aa13.17□□□□□ -0.3
RTFDC1-201ENST00000023939 SLC46A3Q7Z3Q1 461 aa13.17□□□□□ -0.3
RTFDC1-201ENST00000023939 OR1N1Q8NGS0 311 aa13.17□□□□□ -0.3
RTFDC1-201ENST00000023939 PFN4Q8NHR9 129 aa13.17□□□□□ -0.3
RTFDC1-201ENST00000023939 BPIFA2Q96DR5 249 aa13.17□□□□□ -0.3
RTFDC1-201ENST00000023939 OR6C1Q96RD1 312 aa13.17□□□□□ -0.3
RTFDC1-201ENST00000023939 C20orf141Q9NUB4 165 aa13.17□□□□□ -0.3
RTFDC1-201ENST00000023939 MKL2Q9ULH7 1088 aa13.17□□□□□ -0.3
RTFDC1-201ENST00000023939 DIMT1Q9UNQ2 313 aaKnown RBP13.17□□□□□ -0.3
RTFDC1-201ENST00000023939 SDK1Q7Z5N4 2213 aa13.17□□□□□ -0.3
RTFDC1-201ENST00000023939 C2orf92A0A1B0GVN3 265 aa13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 HTR3EA5X5Y0 456 aa13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 TMEM221A6NGB7 291 aa13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 A8MUA0 341 aa13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 M0R296 226 aa13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 NGFRP08138 427 aa13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 SYPP08247 313 aa13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 CDK4P11802 303 aa13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 ZNF182P17025 639 aaPredicted RBP13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 TBXA2RP21731 343 aa13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 GRK5P34947 590 aa13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 GAS1P54826 345 aa13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 NKAIN1Q4KMZ8 207 aa13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 TRIM61Q5EBN2 209 aa13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 ALG10BQ5I7T1 473 aa13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 AADACL4Q5VUY2 407 aa13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 C19orf48Q6RUI8 117 aa13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 LAPTM4BQ86VI4 370 aa13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 ZNF441Q8N8Z8 693 aa13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 IFI44Q8TCB0 444 aa13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 STT3BQ8TCJ2 826 aa13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 DNAJA4Q8WW22 397 aaPredicted RBP13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 DPH1Q9BZG8 443 aa13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 OR52D1Q9H346 318 aa13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 UBQLN3Q9H347 655 aa13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 HHATLQ9HCP6 504 aa13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 FGF20Q9NP95 211 aaPredicted RBP13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 MEPEQ9NQ76 525 aaPredicted RBP13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 CTSFQ9UBX1 484 aa13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 LSM2Q9Y333 95 aaKnown RBP13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 PATE3B3GLJ2 98 aa13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 NTN3O00634 580 aaPredicted RBP13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 PTP4A3O75365 173 aa13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 UTS2O95399 124 aa13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 CYC1P08574 325 aa13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 ZGLP1P0C6A0 271 aa13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 GPR143P51810 404 aa13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 FXYD6P3P58550 94 aa13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 RAB40BQ12829 278 aa13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 TRA2AQ13595 282 aaKnown RBP eCLIP13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 C3orf38Q5JPI3 329 aa13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 CLEC12AQ5QGZ9 265 aa13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 ZNF385CQ66K41 422 aaPredicted RBP13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 SLC30A6Q6NXT4 461 aa13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 KIRREL2Q6UWL6 708 aa13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 LINC00299Q6ZSB3 139 aa13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 BCDIN3DQ7Z5W3 292 aaKnown RBP13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 BMP8AQ7Z5Y6 402 aa13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 C9orf40Q8IXQ3 194 aa13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 LNX2Q8N448 690 aa13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 ZBTB44Q8NCP5 570 aa13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 ANKK1Q8NFD2 765 aa13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 PROKR2Q8NFJ6 384 aa13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 GRHL3Q8TE85 626 aa13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 RFKQ969G6 155 aa13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 EFHD2Q96C19 240 aaPredicted RBP13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 HSPBAP1Q96EW2 488 aa13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 SAMD8Q96LT4 415 aa13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 LMF1Q96S06 567 aa13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 SLC7A5P2Q9GIP4 190 aa13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 FN3KQ9H479 309 aa13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 SLC24A3Q9HC58 644 aa13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 COPS7AQ9UBW8 275 aa13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 ICAM5Q9UMF0 924 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms