RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 ADAMTS16Q8TE57 1224 aa15.88■□□□□ 0.13
PHGDH-234ENST00000642041 YIPF4Q9BSR8 244 aa15.88■□□□□ 0.13
PHGDH-234ENST00000642041 DGCR6LQ9BY27 220 aa15.88■□□□□ 0.13
PHGDH-234ENST00000642041 PRRG3Q9BZD7 231 aa15.88■□□□□ 0.13
PHGDH-234ENST00000642041 GRIP2Q9C0E4 1043 aa15.88■□□□□ 0.13
PHGDH-234ENST00000642041 OR10A5Q9H207 317 aa15.88■□□□□ 0.13
PHGDH-234ENST00000642041 FOLH1BQ9HBA9 442 aa15.88■□□□□ 0.13
PHGDH-234ENST00000642041 CCNB1IP1Q9NPC3 277 aa15.88■□□□□ 0.13
PHGDH-234ENST00000642041 LANCL2Q9NS86 450 aa15.88■□□□□ 0.13
PHGDH-234ENST00000642041 SCN3BQ9NY72 215 aa15.88■□□□□ 0.13
PHGDH-234ENST00000642041 UBAP1Q9NZ09 502 aa15.88■□□□□ 0.13
PHGDH-234ENST00000642041 COPS7AQ9UBW8 275 aa15.88■□□□□ 0.13
PHGDH-234ENST00000642041 C19orf25Q9UFG5 118 aaPredicted RBP15.88■□□□□ 0.13
PHGDH-234ENST00000642041 TESMINQ9Y4I5 508 aa15.88■□□□□ 0.13
PHGDH-234ENST00000642041 SVILO95425 2214 aa15.88■□□□□ 0.13
PHGDH-234ENST00000642041 IGKV3D-11A0A0A0MRZ8 115 aa15.87■□□□□ 0.13
PHGDH-234ENST00000642041 PRAMEF27A3QJZ7 478 aa15.87■□□□□ 0.13
PHGDH-234ENST00000642041 TRIM64A6NGJ6 449 aa15.87■□□□□ 0.13
PHGDH-234ENST00000642041 A6NHS1 94 aa15.87■□□□□ 0.13
PHGDH-234ENST00000642041 STK17BO94768 372 aa15.87■□□□□ 0.13
PHGDH-234ENST00000642041 CBX7O95931 251 aa15.87■□□□□ 0.13
PHGDH-234ENST00000642041 S1PR1P21453 382 aa15.87■□□□□ 0.13
PHGDH-234ENST00000642041 DRD5P21918 477 aa15.87■□□□□ 0.13
PHGDH-234ENST00000642041 F8A1P23610 371 aa15.87■□□□□ 0.13
PHGDH-234ENST00000642041 PPICP45877 212 aa15.87■□□□□ 0.13
PHGDH-234ENST00000642041 OR1E2P47887 323 aa15.87■□□□□ 0.13
PHGDH-234ENST00000642041 DAPP51397 102 aa15.87■□□□□ 0.13
PHGDH-234ENST00000642041 ALDH6A1Q02252 535 aaKnown RBP15.87■□□□□ 0.13
PHGDH-234ENST00000642041 ERV3-1Q14264 604 aa15.87■□□□□ 0.13
PHGDH-234ENST00000642041 ZNF267Q14586 743 aaPredicted RBP15.87■□□□□ 0.13
PHGDH-234ENST00000642041 DECR1Q16698 335 aa15.87■□□□□ 0.13
PHGDH-234ENST00000642041 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.87■□□□□ 0.13
PHGDH-234ENST00000642041 RPS26P11Q5JNZ5 115 aaPredicted RBP15.87■□□□□ 0.13
PHGDH-234ENST00000642041 ZNF691Q5VV52 312 aa15.87■□□□□ 0.13
PHGDH-234ENST00000642041 ESX1Q8N693 406 aa15.87■□□□□ 0.13
PHGDH-234ENST00000642041 TMEM52Q8NDY8 209 aa15.87■□□□□ 0.13
PHGDH-234ENST00000642041 TSPAN14Q8NG11 270 aa15.87■□□□□ 0.13
PHGDH-234ENST00000642041 TRUB1Q8WWH5 349 aaKnown RBP15.87■□□□□ 0.13
PHGDH-234ENST00000642041 METTL21AQ8WXB1 218 aa15.87■□□□□ 0.13
PHGDH-234ENST00000642041 ZNF566Q969W8 418 aa15.87■□□□□ 0.13
PHGDH-234ENST00000642041 HRASLS5Q96KN8 279 aa15.87■□□□□ 0.13
PHGDH-234ENST00000642041 HS6ST2Q96MM7 605 aa15.87■□□□□ 0.13
PHGDH-234ENST00000642041 OR6C1Q96RD1 312 aa15.87■□□□□ 0.13
PHGDH-234ENST00000642041 SLC26A1Q9H2B4 701 aa15.87■□□□□ 0.13
PHGDH-234ENST00000642041 SMURF2Q9HAU4 748 aa15.87■□□□□ 0.13
PHGDH-234ENST00000642041 FBXO8Q9NRD0 319 aa15.87■□□□□ 0.13
PHGDH-234ENST00000642041 TESQ9UGI8 421 aaKnown RBP15.87■□□□□ 0.13
PHGDH-234ENST00000642041 TMEFF2Q9UIK5 374 aaPredicted RBP15.87■□□□□ 0.13
PHGDH-234ENST00000642041 ZNF443Q9Y2A4 671 aaPredicted RBP15.87■□□□□ 0.13
PHGDH-234ENST00000642041 TPRKBQ9Y3C4 175 aa15.87■□□□□ 0.13
PHGDH-234ENST00000642041 GMPPBQ9Y5P6 360 aa15.87■□□□□ 0.13
PHGDH-234ENST00000642041 DIDO1Q9BTC0 2240 aaKnown RBP15.87■□□□□ 0.13
PHGDH-234ENST00000642041 TCRBV16S1A1N1A0A5B0 115 aa15.86■□□□□ 0.13
PHGDH-234ENST00000642041 C17orf105B2RV13 164 aa15.86■□□□□ 0.13
PHGDH-234ENST00000642041 BCKDKO14874 412 aa15.86■□□□□ 0.13
PHGDH-234ENST00000642041 DNAJB6O75190 326 aa15.86■□□□□ 0.13
PHGDH-234ENST00000642041 DLGAP3O95886 979 aa15.86■□□□□ 0.13
PHGDH-234ENST00000642041 KLK3P07288 261 aaPredicted RBP15.86■□□□□ 0.13
PHGDH-234ENST00000642041 PIGAP37287 484 aa15.86■□□□□ 0.13
PHGDH-234ENST00000642041 ADH7P40394 386 aa15.86■□□□□ 0.13
PHGDH-234ENST00000642041 EMDP50402 254 aa15.86■□□□□ 0.13
PHGDH-234ENST00000642041 UGT2B15P54855 530 aa15.86■□□□□ 0.13
PHGDH-234ENST00000642041 RGS8P57771 180 aaPredicted RBP15.86■□□□□ 0.13
PHGDH-234ENST00000642041 TAS2R41P59536 307 aa15.86■□□□□ 0.13
PHGDH-234ENST00000642041 FUT5Q11128 374 aa15.86■□□□□ 0.13
PHGDH-234ENST00000642041 HLA-DQA1Q5Y7H0 255 aa15.86■□□□□ 0.13
PHGDH-234ENST00000642041 GALNT10Q86SR1 603 aa15.86■□□□□ 0.13
PHGDH-234ENST00000642041 OR10Q1Q8NGQ4 319 aa15.86■□□□□ 0.13
PHGDH-234ENST00000642041 VSTM2LQ96N03 204 aa15.86■□□□□ 0.13
PHGDH-234ENST00000642041 FEVQ99581 238 aa15.86■□□□□ 0.13
PHGDH-234ENST00000642041 PITX2Q99697 317 aa15.86■□□□□ 0.13
PHGDH-234ENST00000642041 CTRCQ99895 268 aa15.86■□□□□ 0.13
PHGDH-234ENST00000642041 ZNF559Q9BR84 538 aa15.86■□□□□ 0.13
PHGDH-234ENST00000642041 NDRG4Q9ULP0 352 aaKnown RBP15.86■□□□□ 0.13
PHGDH-234ENST00000642041 SLC35A3Q9Y2D2 325 aa15.86■□□□□ 0.13
PHGDH-234ENST00000642041 FBN3Q75N90 2809 aa15.86■□□□□ 0.13
PHGDH-234ENST00000642041 SCRG1O75711 98 aa15.85■□□□□ 0.13
PHGDH-234ENST00000642041 IST1P53990 364 aa15.85■□□□□ 0.13
PHGDH-234ENST00000642041 ATP12AP54707 1039 aa15.85■□□□□ 0.13
PHGDH-234ENST00000642041 CDC42P60953 191 aa15.85■□□□□ 0.13
PHGDH-234ENST00000642041 ID2Q02363 134 aa15.85■□□□□ 0.13
PHGDH-234ENST00000642041 ZNF141Q15928 474 aa15.85■□□□□ 0.13
PHGDH-234ENST00000642041 EXOC3L2Q2M3D2 409 aa15.85■□□□□ 0.13
PHGDH-234ENST00000642041 DEF8Q6ZN54 512 aa15.85■□□□□ 0.13
PHGDH-234ENST00000642041 OVCH1Q7RTY7 1134 aa15.85■□□□□ 0.13
PHGDH-234ENST00000642041 TMEM179BQ7Z7N9 219 aa15.85■□□□□ 0.13
PHGDH-234ENST00000642041 SLC43A2Q8N370 569 aa15.85■□□□□ 0.13
PHGDH-234ENST00000642041 ZNF786Q8N393 782 aa15.85■□□□□ 0.13
PHGDH-234ENST00000642041 IPCEF1Q8WWN9 437 aaPredicted RBP15.85■□□□□ 0.13
PHGDH-234ENST00000642041 TP53INP1Q96A56 240 aa15.85■□□□□ 0.13
PHGDH-234ENST00000642041 CLIP3Q96DZ5 547 aa15.85■□□□□ 0.13
PHGDH-234ENST00000642041 HSPBAP1Q96EW2 488 aa15.85■□□□□ 0.13
PHGDH-234ENST00000642041 POM121Q96HA1 1249 aa15.85■□□□□ 0.13
PHGDH-234ENST00000642041 SENP5Q96HI0 755 aaPredicted RBP15.85■□□□□ 0.13
PHGDH-234ENST00000642041 MUS81Q96NY9 551 aa15.85■□□□□ 0.13
PHGDH-234ENST00000642041 CNPPD1Q9BV87 410 aa15.85■□□□□ 0.13
PHGDH-234ENST00000642041 TRIM2Q9C040 744 aa15.85■□□□□ 0.13
PHGDH-234ENST00000642041 WDR54Q9H977 334 aa15.85■□□□□ 0.13
PHGDH-234ENST00000642041 TMEM27Q9HBJ8 222 aa15.85■□□□□ 0.13
PHGDH-234ENST00000642041 CBLCQ9ULV8 474 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms