RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 CBX5P45973 191 aa12.83□□□□□ -0.36
SCARB2-227ENST00000640957 RFX3P48380 749 aa12.83□□□□□ -0.36
SCARB2-227ENST00000640957 SNRPD1P62314 119 aaKnown RBP12.83□□□□□ -0.36
SCARB2-227ENST00000640957 HLXQ14774 488 aaPredicted RBP12.83□□□□□ -0.36
SCARB2-227ENST00000640957 GPR33Q49SQ1 333 aa12.83□□□□□ -0.36
SCARB2-227ENST00000640957 MINDY4Q4G0A6 757 aa12.83□□□□□ -0.36
SCARB2-227ENST00000640957 TP53I3Q53FA7 332 aa12.83□□□□□ -0.36
SCARB2-227ENST00000640957 METAP1DQ6UB28 335 aaPredicted RBP12.83□□□□□ -0.36
SCARB2-227ENST00000640957 NDUFAF7Q7L592 441 aa12.83□□□□□ -0.36
SCARB2-227ENST00000640957 HSD11B1LQ7Z5J1 315 aa12.83□□□□□ -0.36
SCARB2-227ENST00000640957 PLA2G15Q8NCC3 412 aa12.83□□□□□ -0.36
SCARB2-227ENST00000640957 OR52I2Q8NH67 350 aa12.83□□□□□ -0.36
SCARB2-227ENST00000640957 OR5W2Q8NH69 310 aa12.83□□□□□ -0.36
SCARB2-227ENST00000640957 ADAMTS14Q8WXS8 1223 aa12.83□□□□□ -0.36
SCARB2-227ENST00000640957 C11orf49Q9H6J7 331 aa12.83□□□□□ -0.36
SCARB2-227ENST00000640957 CAPN10Q9HC96 672 aa12.83□□□□□ -0.36
SCARB2-227ENST00000640957 TMEM138Q9NPI0 162 aa12.83□□□□□ -0.36
SCARB2-227ENST00000640957 CREBZFQ9NS37 354 aa12.83□□□□□ -0.36
SCARB2-227ENST00000640957 H0YIV9 168 aa12.82□□□□□ -0.36
SCARB2-227ENST00000640957 GPR31O00270 319 aa12.82□□□□□ -0.36
SCARB2-227ENST00000640957 SCAMP1O15126 338 aa12.82□□□□□ -0.36
SCARB2-227ENST00000640957 TO15178 435 aa12.82□□□□□ -0.36
SCARB2-227ENST00000640957 NARSO43776 548 aaKnown RBP12.82□□□□□ -0.36
SCARB2-227ENST00000640957 EFCAB14O75071 495 aa12.82□□□□□ -0.36
SCARB2-227ENST00000640957 NPPBP16860 134 aa12.82□□□□□ -0.36
SCARB2-227ENST00000640957 RAB3BP20337 219 aa12.82□□□□□ -0.36
SCARB2-227ENST00000640957 GRPRP30550 384 aa12.82□□□□□ -0.36
SCARB2-227ENST00000640957 CCR8P51685 355 aa12.82□□□□□ -0.36
SCARB2-227ENST00000640957 FZD5Q13467 585 aa12.82□□□□□ -0.36
SCARB2-227ENST00000640957 ODF4Q2M2E3 257 aa12.82□□□□□ -0.36
SCARB2-227ENST00000640957 FAM71E1Q6IPT2 247 aa12.82□□□□□ -0.36
SCARB2-227ENST00000640957 TMEM220Q6QAJ8 160 aa12.82□□□□□ -0.36
SCARB2-227ENST00000640957 PTP4A1Q93096 173 aa12.82□□□□□ -0.36
SCARB2-227ENST00000640957 RELTQ969Z4 430 aa12.82□□□□□ -0.36
SCARB2-227ENST00000640957 FBXO17Q96EF6 278 aa12.82□□□□□ -0.36
SCARB2-227ENST00000640957 C4orf36Q96KX1 117 aa12.82□□□□□ -0.36
SCARB2-227ENST00000640957 DMRT3Q9NQL9 472 aa12.82□□□□□ -0.36
SCARB2-227ENST00000640957 ZNF175Q9Y473 711 aa12.82□□□□□ -0.36
SCARB2-227ENST00000640957 ASCC3Q8N3C0 2202 aaKnown RBP12.82□□□□□ -0.36
SCARB2-227ENST00000640957 SCN8AQ9UQD0 1980 aa12.82□□□□□ -0.36
SCARB2-227ENST00000640957 CDC42EP2O14613 210 aa12.82□□□□□ -0.36
SCARB2-227ENST00000640957 LIPCP11150 499 aa12.82□□□□□ -0.36
SCARB2-227ENST00000640957 PSMB10P40306 273 aa12.82□□□□□ -0.36
SCARB2-227ENST00000640957 HEPHL1Q6MZM0 1159 aa12.82□□□□□ -0.36
SCARB2-227ENST00000640957 CD200R1LQ6Q8B3 271 aa12.82□□□□□ -0.36
SCARB2-227ENST00000640957 OR2AP1Q8NGE2 309 aa12.82□□□□□ -0.36
SCARB2-227ENST00000640957 STK35Q8TDR2 534 aa12.82□□□□□ -0.36
SCARB2-227ENST00000640957 ZDHHC1Q8WTX9 485 aa12.82□□□□□ -0.36
SCARB2-227ENST00000640957 ZNF607Q96SK3 696 aa12.82□□□□□ -0.36
SCARB2-227ENST00000640957 PDCD1LG2Q9BQ51 273 aa12.82□□□□□ -0.36
SCARB2-227ENST00000640957 CD93Q9NPY3 652 aa12.82□□□□□ -0.36
SCARB2-227ENST00000640957 SLC22A11Q9NSA0 550 aa12.82□□□□□ -0.36
SCARB2-227ENST00000640957 HCFC1R1Q9NWW0 138 aa12.82□□□□□ -0.36
SCARB2-227ENST00000640957 ZMAT5Q9UDW3 170 aaKnown RBP12.82□□□□□ -0.36
SCARB2-227ENST00000640957 NPIPB8E9PQR5 432 aa12.82□□□□□ -0.36
SCARB2-227ENST00000640957 DNASE2O00115 360 aaPredicted RBP12.82□□□□□ -0.36
SCARB2-227ENST00000640957 UQCRC2P22695 453 aa12.82□□□□□ -0.36
SCARB2-227ENST00000640957 NOS3P29474 1203 aa12.82□□□□□ -0.36
SCARB2-227ENST00000640957 GCGRP47871 477 aa12.82□□□□□ -0.36
SCARB2-227ENST00000640957 AP1S1P61966 158 aa12.82□□□□□ -0.36
SCARB2-227ENST00000640957 ACSM3Q53FZ2 586 aa12.82□□□□□ -0.36
SCARB2-227ENST00000640957 HIST2H2AA3Q6FI13 130 aa12.82□□□□□ -0.36
SCARB2-227ENST00000640957 TFAP2EQ6VUC0 442 aa12.82□□□□□ -0.36
SCARB2-227ENST00000640957 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.82□□□□□ -0.36
SCARB2-227ENST00000640957 ZNF485Q8NCK3 441 aa12.82□□□□□ -0.36
SCARB2-227ENST00000640957 OR5J2Q8NH18 312 aa12.82□□□□□ -0.36
SCARB2-227ENST00000640957 LGALS14Q8TCE9 139 aa12.82□□□□□ -0.36
SCARB2-227ENST00000640957 IGSF21Q96ID5 467 aa12.82□□□□□ -0.36
SCARB2-227ENST00000640957 FCRL1Q96LA6 429 aa12.82□□□□□ -0.36
SCARB2-227ENST00000640957 SLC38A3Q99624 504 aa12.82□□□□□ -0.36
SCARB2-227ENST00000640957 UQCC2Q9BRT2 126 aa12.82□□□□□ -0.36
SCARB2-227ENST00000640957 TAS2R3Q9NYW6 316 aa12.82□□□□□ -0.36
SCARB2-227ENST00000640957 AP1M2Q9Y6Q5 423 aa12.82□□□□□ -0.36
SCARB2-227ENST00000640957 TRBV23-1A0A0A0MS06 115 aa12.81□□□□□ -0.36
SCARB2-227ENST00000640957 TMEM189-UBE2V1I3L0A0 370 aa12.81□□□□□ -0.36
SCARB2-227ENST00000640957 GNB5O14775 395 aa12.81□□□□□ -0.36
SCARB2-227ENST00000640957 PEX14O75381 377 aa12.81□□□□□ -0.36
SCARB2-227ENST00000640957 CATP04040 527 aaKnown RBP12.81□□□□□ -0.36
SCARB2-227ENST00000640957 CHRM4P08173 479 aa12.81□□□□□ -0.36
SCARB2-227ENST00000640957 RBMS2Q15434 407 aaKnown RBP12.81□□□□□ -0.36
SCARB2-227ENST00000640957 STPG1Q5TH74 334 aa12.81□□□□□ -0.36
SCARB2-227ENST00000640957 YOD1Q5VVQ6 348 aaPredicted RBP12.81□□□□□ -0.36
SCARB2-227ENST00000640957 LRRN1Q6UXK5 716 aa12.81□□□□□ -0.36
SCARB2-227ENST00000640957 TRAPPC5Q8IUR0 188 aa12.81□□□□□ -0.36
SCARB2-227ENST00000640957 CCDC116Q8IYX3 515 aa12.81□□□□□ -0.36
SCARB2-227ENST00000640957 CPXM2Q8N436 756 aa12.81□□□□□ -0.36
SCARB2-227ENST00000640957 MORN4Q8NDC4 146 aa12.81□□□□□ -0.36
SCARB2-227ENST00000640957 ZNF578Q96N58 590 aaPredicted RBP12.81□□□□□ -0.36
SCARB2-227ENST00000640957 KLF16Q9BXK1 252 aaPredicted RBP12.81□□□□□ -0.36
SCARB2-227ENST00000640957 DPH1Q9BZG8 443 aa12.81□□□□□ -0.36
SCARB2-227ENST00000640957 SUV39H2Q9H5I1 410 aa12.81□□□□□ -0.36
SCARB2-227ENST00000640957 ZNF304Q9HCX3 659 aa12.81□□□□□ -0.36
SCARB2-227ENST00000640957 ARPC4-TTLL3A0A0A6YYG9 625 aa12.81□□□□□ -0.36
SCARB2-227ENST00000640957 ABHD14A-ACY1A0A1B0GW23 586 aa12.81□□□□□ -0.36
SCARB2-227ENST00000640957 SUSD5O60279 629 aa12.81□□□□□ -0.36
SCARB2-227ENST00000640957 ZNF35P13682 527 aa12.81□□□□□ -0.36
SCARB2-227ENST00000640957 AP1S2P56377 157 aa12.81□□□□□ -0.36
SCARB2-227ENST00000640957 RPS15P62841 145 aaKnown RBP12.81□□□□□ -0.36
SCARB2-227ENST00000640957 DEFB103AP81534 67 aa12.81□□□□□ -0.36
SCARB2-227ENST00000640957 PRR5P85299 388 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms