RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 TPBGLP0DKB5 382 aa-0.78□□□□□ -2.53
LMBR1-222ENST00000638959 ALPPL2P10696 532 aa-0.78□□□□□ -2.53
LMBR1-222ENST00000638959 HRES1P13985 223 aa-0.78□□□□□ -2.53
LMBR1-222ENST00000638959 LBPP18428 481 aa-0.78□□□□□ -2.53
LMBR1-222ENST00000638959 CX3CR1P49238 355 aa-0.78□□□□□ -2.53
LMBR1-222ENST00000638959 GABPAQ06546 454 aa-0.78□□□□□ -2.53
LMBR1-222ENST00000638959 ST3GAL3Q11203 375 aa-0.78□□□□□ -2.53
LMBR1-222ENST00000638959 IL23RQ5VWK5 629 aa-0.78□□□□□ -2.53
LMBR1-222ENST00000638959 FRMPD2BQ6IN97 320 aa-0.78□□□□□ -2.53
LMBR1-222ENST00000638959 ASRGL1Q7L266 308 aa-0.78□□□□□ -2.53
LMBR1-222ENST00000638959 ANKRD46Q86W74 232 aa-0.78□□□□□ -2.53
LMBR1-222ENST00000638959 CREBRFQ8IUR6 639 aa-0.78□□□□□ -2.53
LMBR1-222ENST00000638959 C15orf56Q8N910 161 aa-0.78□□□□□ -2.53
LMBR1-222ENST00000638959 SYT2Q8N9I0 419 aaPredicted RBP-0.78□□□□□ -2.53
LMBR1-222ENST00000638959 NKAPP1Q8N9T2 125 aa-0.78□□□□□ -2.53
LMBR1-222ENST00000638959 TEX19Q8NA77 164 aa-0.78□□□□□ -2.53
LMBR1-222ENST00000638959 ZSCAN4Q8NAM6 433 aaPredicted RBP-0.78□□□□□ -2.53
LMBR1-222ENST00000638959 SIDT2Q8NBJ9 832 aaKnown RBP-0.78□□□□□ -2.53
LMBR1-222ENST00000638959 OR4F17Q8NGA8 305 aa-0.78□□□□□ -2.53
LMBR1-222ENST00000638959 FANK1Q8TC84 345 aa-0.78□□□□□ -2.53
LMBR1-222ENST00000638959 NEURL3Q96EH8 262 aa-0.78□□□□□ -2.53
LMBR1-222ENST00000638959 RNF145Q96MT1 663 aa-0.78□□□□□ -2.53
LMBR1-222ENST00000638959 OR4F4Q96R69 305 aa-0.78□□□□□ -2.53
LMBR1-222ENST00000638959 ARPC5LQ9BPX5 153 aa-0.78□□□□□ -2.53
LMBR1-222ENST00000638959 APOOQ9BUR5 198 aa-0.78□□□□□ -2.53
LMBR1-222ENST00000638959 DHX35Q9H5Z1 703 aaKnown RBP-0.78□□□□□ -2.53
LMBR1-222ENST00000638959 ANKMY1Q9P2S6 941 aa-0.78□□□□□ -2.53
LMBR1-222ENST00000638959 IGHV5-51A0A0C4DH38 117 aa-0.79□□□□□ -2.54
LMBR1-222ENST00000638959 hCG_1809904A0A1W2PP81 198 aa-0.79□□□□□ -2.54
LMBR1-222ENST00000638959 A0A1W2PPE2 198 aa-0.79□□□□□ -2.54
LMBR1-222ENST00000638959 A0A1W2PR64 198 aa-0.79□□□□□ -2.54
LMBR1-222ENST00000638959 TMEM223A0PJW6 202 aa-0.79□□□□□ -2.54
LMBR1-222ENST00000638959 PGPEP1LA6NFU8 196 aa-0.79□□□□□ -2.54
LMBR1-222ENST00000638959 SAGE2PA6NJ88 616 aa-0.79□□□□□ -2.54
LMBR1-222ENST00000638959 PDLIM1O00151 329 aa-0.79□□□□□ -2.54
LMBR1-222ENST00000638959 SH2D1BO14796 132 aa-0.79□□□□□ -2.54
LMBR1-222ENST00000638959 RAD51BO15315 384 aa-0.79□□□□□ -2.54
LMBR1-222ENST00000638959 CCNE2O96020 404 aa-0.79□□□□□ -2.54
LMBR1-222ENST00000638959 IGLV2-23P01705 113 aa-0.79□□□□□ -2.54
LMBR1-222ENST00000638959 P04436 131 aa-0.79□□□□□ -2.54
LMBR1-222ENST00000638959 IGFBP1P08833 259 aaPredicted RBP-0.79□□□□□ -2.54
LMBR1-222ENST00000638959 PSMA3P25788 255 aa-0.79□□□□□ -2.54
LMBR1-222ENST00000638959 ASMTP46597 345 aa-0.79□□□□□ -2.54
LMBR1-222ENST00000638959 ESRRGP62508 458 aa-0.79□□□□□ -2.54
LMBR1-222ENST00000638959 GALK2Q01415 458 aa-0.79□□□□□ -2.54
LMBR1-222ENST00000638959 RAB35Q15286 201 aa-0.79□□□□□ -2.54
LMBR1-222ENST00000638959 UGCGQ16739 394 aa-0.79□□□□□ -2.54
LMBR1-222ENST00000638959 ADNP2Q6IQ32 1131 aa-0.79□□□□□ -2.54
LMBR1-222ENST00000638959 CASP12Q6UXS9 341 aa-0.79□□□□□ -2.54
LMBR1-222ENST00000638959 FAM92BQ6ZTR7 304 aa-0.79□□□□□ -2.54
LMBR1-222ENST00000638959 CCDC54Q8NEL0 328 aa-0.79□□□□□ -2.54
LMBR1-222ENST00000638959 OR10G9Q8NGN4 311 aa-0.79□□□□□ -2.54
LMBR1-222ENST00000638959 RMDN2Q96LZ7 410 aa-0.79□□□□□ -2.54
LMBR1-222ENST00000638959 CSPG4P5Q96PW8 444 aa-0.79□□□□□ -2.54
LMBR1-222ENST00000638959 GCNAQ96QF7 691 aa-0.79□□□□□ -2.54
LMBR1-222ENST00000638959 SLC26A6Q9BXS9 759 aa-0.79□□□□□ -2.54
LMBR1-222ENST00000638959 KLHL4Q9C0H6 718 aa-0.79□□□□□ -2.54
LMBR1-222ENST00000638959 DDX47Q9H0S4 455 aaKnown RBP-0.79□□□□□ -2.54
LMBR1-222ENST00000638959 ADD3Q9UEY8 706 aaKnown RBP-0.79□□□□□ -2.54
LMBR1-222ENST00000638959 ANAPC2Q9UJX6 822 aa-0.79□□□□□ -2.54
LMBR1-222ENST00000638959 MRTO4Q9UKD2 239 aaKnown RBP-0.79□□□□□ -2.54
LMBR1-222ENST00000638959 CR1P17927 2039 aa-0.79□□□□□ -2.54
LMBR1-222ENST00000638959 PTPRTO14522 1441 aa-0.8□□□□□ -2.54
LMBR1-222ENST00000638959 KIF7Q2M1P5 1343 aa-0.8□□□□□ -2.54
LMBR1-222ENST00000638959 MICAL3Q7RTP6 2002 aa-0.8□□□□□ -2.54
LMBR1-222ENST00000638959 HCRTR1O43613 425 aa-0.8□□□□□ -2.54
LMBR1-222ENST00000638959 LDHAP00338 332 aaKnown RBP-0.8□□□□□ -2.54
LMBR1-222ENST00000638959 SLC26A3P40879 764 aa-0.8□□□□□ -2.54
LMBR1-222ENST00000638959 STK19P49842 368 aaPredicted RBP-0.8□□□□□ -2.54
LMBR1-222ENST00000638959 RAB28P51157 221 aa-0.8□□□□□ -2.54
LMBR1-222ENST00000638959 RAP1AP62834 184 aa-0.8□□□□□ -2.54
LMBR1-222ENST00000638959 ALCAMQ13740 583 aa-0.8□□□□□ -2.54
LMBR1-222ENST00000638959 TWISTNBQ3B726 338 aaPredicted RBP-0.8□□□□□ -2.54
LMBR1-222ENST00000638959 TAGAPQ8N103 731 aa-0.8□□□□□ -2.54
LMBR1-222ENST00000638959 PYROXD2Q8N2H3 581 aa-0.8□□□□□ -2.54
LMBR1-222ENST00000638959 SFRP1Q8N474 314 aa-0.8□□□□□ -2.54
LMBR1-222ENST00000638959 ST20-AS1Q8NBB2 130 aa-0.8□□□□□ -2.54
LMBR1-222ENST00000638959 NAXEQ8NCW5 288 aa-0.8□□□□□ -2.54
LMBR1-222ENST00000638959 OR10G4Q8NGN3 311 aa-0.8□□□□□ -2.54
LMBR1-222ENST00000638959 RSRC1Q96IZ7 334 aaKnown RBP-0.8□□□□□ -2.54
LMBR1-222ENST00000638959 TSG101Q99816 390 aa-0.8□□□□□ -2.54
LMBR1-222ENST00000638959 SMR3AQ99954 134 aa-0.8□□□□□ -2.54
LMBR1-222ENST00000638959 SAMD4AQ9UPU9 718 aaKnown RBP-0.8□□□□□ -2.54
LMBR1-222ENST00000638959 KLHDC2Q9Y2U9 406 aa-0.8□□□□□ -2.54
LMBR1-222ENST00000638959 HEBP2Q9Y5Z4 205 aa-0.8□□□□□ -2.54
LMBR1-222ENST00000638959 SLC25A15Q9Y619 301 aa-0.8□□□□□ -2.54
LMBR1-222ENST00000638959 LTBP2Q14767 1821 aa-0.8□□□□□ -2.54
LMBR1-222ENST00000638959 TET2Q6N021 2002 aaPredicted RBP-0.81□□□□□ -2.54
LMBR1-222ENST00000638959 PLEKHH1Q9ULM0 1364 aa-0.81□□□□□ -2.54
LMBR1-222ENST00000638959 IGHV3-66A0A0C4DH42 116 aa-0.81□□□□□ -2.54
LMBR1-222ENST00000638959 A0A1B0GVX0 72 aa-0.81□□□□□ -2.54
LMBR1-222ENST00000638959 TRBC2A0A5B9 178 aa-0.81□□□□□ -2.54
LMBR1-222ENST00000638959 C5orf63A6NC05 138 aa-0.81□□□□□ -2.54
LMBR1-222ENST00000638959 SDR42E2A6NKP2 422 aa-0.81□□□□□ -2.54
LMBR1-222ENST00000638959 NPIPA2E9PIF3 369 aa-0.81□□□□□ -2.54
LMBR1-222ENST00000638959 ZNF207O43670 478 aaKnown RBP-0.81□□□□□ -2.54
LMBR1-222ENST00000638959 EPOP01588 193 aa-0.81□□□□□ -2.54
LMBR1-222ENST00000638959 KRT14P02533 472 aa-0.81□□□□□ -2.54
LMBR1-222ENST00000638959 TDGF1P13385 188 aa-0.81□□□□□ -2.54
LMBR1-222ENST00000638959 SLC11A1P49279 550 aa-0.81□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms