RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 GALK2Q01415 458 aa14.39□□□□□ -0.11
CLN8-209ENST00000635970 MEF2AQ02078 507 aaPredicted RBP14.39□□□□□ -0.11
CLN8-209ENST00000635970 ACY1Q03154 408 aa14.39□□□□□ -0.11
CLN8-209ENST00000635970 ZNF91Q05481 1191 aa14.39□□□□□ -0.11
CLN8-209ENST00000635970 FAPQ12884 760 aa14.39□□□□□ -0.11
CLN8-209ENST00000635970 GANABQ14697 944 aaKnown RBP14.39□□□□□ -0.11
CLN8-209ENST00000635970 ZNF425Q6IV72 752 aa14.39□□□□□ -0.11
CLN8-209ENST00000635970 CD300LDQ6UXZ3 194 aa14.39□□□□□ -0.11
CLN8-209ENST00000635970 ZNF767PQ75MW2 155 aa14.39□□□□□ -0.11
CLN8-209ENST00000635970 PAQR7Q86WK9 346 aa14.39□□□□□ -0.11
CLN8-209ENST00000635970 C17orf64Q86WR6 236 aa14.39□□□□□ -0.11
CLN8-209ENST00000635970 DUSP18Q8NEJ0 188 aa14.39□□□□□ -0.11
CLN8-209ENST00000635970 OR4K1Q8NGD4 311 aa14.39□□□□□ -0.11
CLN8-209ENST00000635970 OR1L3Q8NH93 324 aa14.39□□□□□ -0.11
CLN8-209ENST00000635970 NEIL2Q969S2 332 aa14.39□□□□□ -0.11
CLN8-209ENST00000635970 PRAP1Q96NZ9 151 aa14.39□□□□□ -0.11
CLN8-209ENST00000635970 IL4I1Q96RQ9 567 aa14.39□□□□□ -0.11
CLN8-209ENST00000635970 DDA1Q9BW61 102 aa14.39□□□□□ -0.11
CLN8-209ENST00000635970 TSSK6Q9BXA6 273 aa14.39□□□□□ -0.11
CLN8-209ENST00000635970 POLDIP3Q9BY77 421 aaKnown RBP14.39□□□□□ -0.11
CLN8-209ENST00000635970 MMP28Q9H239 520 aa14.39□□□□□ -0.11
CLN8-209ENST00000635970 CCDC86Q9H6F5 360 aaKnown RBP14.39□□□□□ -0.11
CLN8-209ENST00000635970 RARRES3Q9UL19 164 aa14.39□□□□□ -0.11
CLN8-209ENST00000635970 GSTK1Q9Y2Q3 226 aa14.39□□□□□ -0.11
CLN8-209ENST00000635970 A0A1W2PRB8 838 aa14.38□□□□□ -0.11
CLN8-209ENST00000635970 SNTNA6NMZ2 147 aa14.38□□□□□ -0.11
CLN8-209ENST00000635970 TFECO14948 347 aaPredicted RBP14.38□□□□□ -0.11
CLN8-209ENST00000635970 TLX3O43711 291 aaPredicted RBP14.38□□□□□ -0.11
CLN8-209ENST00000635970 HBQ1P09105 142 aa14.38□□□□□ -0.11
CLN8-209ENST00000635970 TSPAN19P0C672 248 aa14.38□□□□□ -0.11
CLN8-209ENST00000635970 FGF5P12034 268 aa14.38□□□□□ -0.11
CLN8-209ENST00000635970 FOXK2Q01167 660 aa14.38□□□□□ -0.11
CLN8-209ENST00000635970 RIPPLY1Q0D2K3 151 aa14.38□□□□□ -0.11
CLN8-209ENST00000635970 HIST2H2AA3Q6FI13 130 aa14.38□□□□□ -0.11
CLN8-209ENST00000635970 FAM71E1Q6IPT2 247 aa14.38□□□□□ -0.11
CLN8-209ENST00000635970 PWWP2BQ6NUJ5 590 aa14.38□□□□□ -0.11
CLN8-209ENST00000635970 CEACAM20Q6UY09 585 aa14.38□□□□□ -0.11
CLN8-209ENST00000635970 SLCO4C1Q6ZQN7 724 aa14.38□□□□□ -0.11
CLN8-209ENST00000635970 PPP1R3BQ86XI6 285 aa14.38□□□□□ -0.11
CLN8-209ENST00000635970 APOBEC4Q8WW27 367 aaKnown RBP14.38□□□□□ -0.11
CLN8-209ENST00000635970 COQ7Q99807 217 aa14.38□□□□□ -0.11
CLN8-209ENST00000635970 NLNQ9BYT8 704 aa14.38□□□□□ -0.11
CLN8-209ENST00000635970 PCBD2Q9H0N5 130 aa14.38□□□□□ -0.11
CLN8-209ENST00000635970 MIXL1Q9H2W2 232 aa14.38□□□□□ -0.11
CLN8-209ENST00000635970 A4GALTQ9NPC4 353 aa14.38□□□□□ -0.11
CLN8-209ENST00000635970 MRPS18AQ9NVS2 196 aaKnown RBP14.38□□□□□ -0.11
CLN8-209ENST00000635970 PLEKHB1Q9UF11 243 aaPredicted RBP14.38□□□□□ -0.11
CLN8-209ENST00000635970 NUFIP1Q9UHK0 495 aaKnown RBP14.38□□□□□ -0.11
CLN8-209ENST00000635970 CLEC2DQ9UHP7 191 aa14.38□□□□□ -0.11
CLN8-209ENST00000635970 MAP4K5Q9Y4K4 846 aa14.38□□□□□ -0.11
CLN8-209ENST00000635970 FER1L5A0AVI2 2057 aa14.38□□□□□ -0.11
CLN8-209ENST00000635970 TEX51A0A1B0GUA7 166 aa14.38□□□□□ -0.11
CLN8-209ENST00000635970 C1QBP02746 253 aa14.38□□□□□ -0.11
CLN8-209ENST00000635970 ABATP80404 500 aa14.38□□□□□ -0.11
CLN8-209ENST00000635970 C2orf80Q0P641 193 aa14.38□□□□□ -0.11
CLN8-209ENST00000635970 IL11RAQ14626 422 aa14.38□□□□□ -0.11
CLN8-209ENST00000635970 ZNF628Q5EBL2 1059 aa14.38□□□□□ -0.11
CLN8-209ENST00000635970 TMEM164Q5U3C3 297 aa14.38□□□□□ -0.11
CLN8-209ENST00000635970 SAXO2Q658L1 398 aa14.38□□□□□ -0.11
CLN8-209ENST00000635970 RNF44Q7L0R7 432 aa14.38□□□□□ -0.11
CLN8-209ENST00000635970 TMPRSS11BQ86T26 416 aa14.38□□□□□ -0.11
CLN8-209ENST00000635970 LAPTM4BQ86VI4 370 aa14.38□□□□□ -0.11
CLN8-209ENST00000635970 C19orf18Q8NEA5 215 aa14.38□□□□□ -0.11
CLN8-209ENST00000635970 C16orf78Q8WTQ4 265 aa14.38□□□□□ -0.11
CLN8-209ENST00000635970 CHRNA10Q9GZZ6 450 aa14.38□□□□□ -0.11
CLN8-209ENST00000635970 SPNS1Q9H2V7 528 aa14.38□□□□□ -0.11
CLN8-209ENST00000635970 RBFOX1Q9NWB1 397 aaKnown RBP14.38□□□□□ -0.11
CLN8-209ENST00000635970 ING3Q9NXR8 418 aa14.38□□□□□ -0.11
CLN8-209ENST00000635970 PILRAQ9UKJ1 303 aa14.38□□□□□ -0.11
CLN8-209ENST00000635970 LOC105369274A0A096LPK9 316 aa14.37□□□□□ -0.11
CLN8-209ENST00000635970 LOC102723532A0A0G2JNH3 316 aa14.37□□□□□ -0.11
CLN8-209ENST00000635970 FEZF1A0PJY2 475 aa14.37□□□□□ -0.11
CLN8-209ENST00000635970 C5orf58C9J3I9 102 aa14.37□□□□□ -0.11
CLN8-209ENST00000635970 H1F0P07305 194 aaKnown RBP14.37□□□□□ -0.11
CLN8-209ENST00000635970 MSL3P1P0C860 447 aa14.37□□□□□ -0.11
CLN8-209ENST00000635970 NR2F6P10588 404 aa14.37□□□□□ -0.11
CLN8-209ENST00000635970 PRKAR1AP10644 381 aa14.37□□□□□ -0.11
CLN8-209ENST00000635970 CFL1P23528 166 aaKnown RBP14.37□□□□□ -0.11
CLN8-209ENST00000635970 AZGP1P25311 298 aaKnown RBP14.37□□□□□ -0.11
CLN8-209ENST00000635970 ELAVL4P26378 380 aaKnown RBP14.37□□□□□ -0.11
CLN8-209ENST00000635970 FGF9P31371 208 aaPredicted RBP14.37□□□□□ -0.11
CLN8-209ENST00000635970 GZMKP49863 264 aa14.37□□□□□ -0.11
CLN8-209ENST00000635970 RIN1Q13671 783 aa14.37□□□□□ -0.11
CLN8-209ENST00000635970 TAB1Q15750 504 aa14.37□□□□□ -0.11
CLN8-209ENST00000635970 CCDC58Q4VC31 144 aa14.37□□□□□ -0.11
CLN8-209ENST00000635970 PYDC2Q56P42 97 aa14.37□□□□□ -0.11
CLN8-209ENST00000635970 CREB3L2Q70SY1 520 aa14.37□□□□□ -0.11
CLN8-209ENST00000635970 COMMD6Q7Z4G1 85 aa14.37□□□□□ -0.11
CLN8-209ENST00000635970 OR4N4Q8N0Y3 316 aa14.37□□□□□ -0.11
CLN8-209ENST00000635970 SLC5A11Q8WWX8 675 aa14.37□□□□□ -0.11
CLN8-209ENST00000635970 UBE2E3Q969T4 207 aa14.37□□□□□ -0.11
CLN8-209ENST00000635970 ZNF578Q96N58 590 aaPredicted RBP14.37□□□□□ -0.11
CLN8-209ENST00000635970 SPRTNQ9H040 489 aaPredicted RBP14.37□□□□□ -0.11
CLN8-209ENST00000635970 POLR2J3Q9H1A7 115 aaKnown RBP14.37□□□□□ -0.11
CLN8-209ENST00000635970 PRM3Q9NNZ6 103 aa14.37□□□□□ -0.11
CLN8-209ENST00000635970 STARD5Q9NSY2 213 aa14.37□□□□□ -0.11
CLN8-209ENST00000635970 TESQ9UGI8 421 aaKnown RBP14.37□□□□□ -0.11
CLN8-209ENST00000635970 ZZEF1O43149 2961 aa14.36□□□□□ -0.11
CLN8-209ENST00000635970 TRBV4-1A0A0J9YWV2 114 aa14.36□□□□□ -0.11
CLN8-209ENST00000635970 TMEM129A0AVI4 362 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms