RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 RPUSD3Q6P087 351 aaKnown RBP4.46□□□□□ -1.7
LINC00550-201ENST00000629293 Q71RC1 249 aaPredicted RBP4.46□□□□□ -1.7
LINC00550-201ENST00000629293 CPEB2Q7Z5Q1 589 aaKnown RBP4.46□□□□□ -1.7
LINC00550-201ENST00000629293 GPR180Q86V85 440 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 CPOQ8IVL8 374 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 OFCC1Q8IZS5 231 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 TMEM178AQ8NBL3 297 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 FAM98AQ8NCA5 519 aaKnown RBP4.46□□□□□ -1.7
LINC00550-201ENST00000629293 OR2T12Q8NG77 320 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 ADAMTS18Q8TE60 1221 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 CYGBQ8WWM9 190 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 TMBIM1Q969X1 311 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 ISOC1Q96CN7 298 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 RNF145Q96MT1 663 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 ZBTB18Q99592 522 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 EGFL8Q99944 293 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 ATG10Q9H0Y0 220 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 CDCP1Q9H5V8 836 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 C1orf109Q9NX04 203 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 USE1Q9NZ43 259 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 C19orf25Q9UFG5 118 aaPredicted RBP4.46□□□□□ -1.7
LINC00550-201ENST00000629293 ZNF490Q9ULM2 529 aaPredicted RBP4.46□□□□□ -1.7
LINC00550-201ENST00000629293 PDE10AQ9Y233 779 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 A0A096LPI6 279 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 A0A1W2PPV9 198 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 FITM1A5D6W6 292 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 CCDC160A6NGH7 325 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 G3V3Y1 287 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 STK16O75716 305 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 SLC25A12O75746 678 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 SCELO95171 688 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 CLDN9O95484 217 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 CLIC3O95833 236 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 IL18BPO95998 194 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 MPC1LP0DKB6 136 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 PRKCAP17252 672 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 DCKP27707 260 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 ALDH9A1P49189 494 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 CLDN8P56748 225 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 HPCAP84074 193 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 PPP2R2BQ00005 443 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 MEF2AQ02078 507 aaPredicted RBP4.46□□□□□ -1.7
LINC00550-201ENST00000629293 SP140Q13342 867 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 TUBA3CQ13748 450 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 PRTGQ2VWP7 1150 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 FAM98BQ52LJ0 330 aaKnown RBP4.46□□□□□ -1.7
LINC00550-201ENST00000629293 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.46□□□□□ -1.7
LINC00550-201ENST00000629293 CCNYL2Q5T2Q4 361 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 TUBA3EQ6PEY2 450 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 ENPP6Q6UWR7 440 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 GPR141Q7Z602 305 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 ZDHHC13Q8IUH4 622 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 TCAIMQ8N3R3 496 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 SLC5A8Q8N695 610 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 KRTCAP2Q8N6L1 136 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 L3MBTL4Q8NA19 623 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 OR5T3Q8NGG3 340 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 ZNF420Q8TAQ5 688 aaPredicted RBP4.46□□□□□ -1.7
LINC00550-201ENST00000629293 PNPT1Q8TCS8 783 aaKnown RBP4.46□□□□□ -1.7
LINC00550-201ENST00000629293 MAGEE2Q8TD90 523 aaPredicted RBP4.46□□□□□ -1.7
LINC00550-201ENST00000629293 RAB24Q969Q5 203 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 TESCQ96BS2 214 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 ZNF354BQ96LW1 612 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 MBOAT4Q96T53 435 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 SEPHS2Q99611 448 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 LPAR4Q99677 370 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 SORBS1Q9BX66 1292 aaKnown RBP4.46□□□□□ -1.7
LINC00550-201ENST00000629293 DPY30Q9C005 99 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 MAGIXQ9H6Y5 334 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 KAT8Q9H7Z6 458 aaKnown RBP4.46□□□□□ -1.7
LINC00550-201ENST00000629293 SLC6A13Q9NSD5 602 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 DLGAP4Q9Y2H0 992 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 ZANQ9Y493 2812 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 IGKV1-8A0A0C4DH67 115 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 A0A1B0GTH9 108 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 GFYI3L273 518 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 PRAMEF4O60810 478 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 ERN1O75460 977 aaKnown RBP4.45□□□□□ -1.7
LINC00550-201ENST00000629293 PDYNP01213 254 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 C8GP07360 202 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 THRBP10828 461 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 JUNBP17275 347 aaPredicted RBP4.45□□□□□ -1.7
LINC00550-201ENST00000629293 PTGER1P34995 402 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 ARL1P40616 181 aaPredicted RBP4.45□□□□□ -1.7
LINC00550-201ENST00000629293 RPS6KA3P51812 740 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 PNLIPRP1P54315 467 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 MEP1AQ16819 746 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 MST1LQ2TV78 715 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 GTDC1Q4AE62 458 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 DEFB134Q4QY38 66 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 MSANTD1Q6ZTZ1 278 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 RNF44Q7L0R7 432 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 DOLPP1Q86YN1 238 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 KLHDC8AQ8IYD2 350 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 MICU2Q8IYU8 434 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 C10orf111Q8N326 155 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 FBXO15Q8NCQ5 510 aaPredicted RBP4.45□□□□□ -1.7
LINC00550-201ENST00000629293 OR5M9Q8NGP3 310 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 ZNF480Q8WV37 535 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 ASB11Q8WXH4 323 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms