RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 MINDY4Q4G0A6 757 aa20.37■□□□□ 0.85
PNKP-220ENST00000627232 C19orf48Q6RUI8 117 aa20.37■□□□□ 0.85
PNKP-220ENST00000627232 TUBA1AQ71U36 451 aa20.37■□□□□ 0.85
PNKP-220ENST00000627232 SLCO6A1Q86UG4 719 aa20.37■□□□□ 0.85
PNKP-220ENST00000627232 TMEM151BQ8IW70 566 aa20.37■□□□□ 0.85
PNKP-220ENST00000627232 PROKR2Q8NFJ6 384 aa20.37■□□□□ 0.85
PNKP-220ENST00000627232 OR2T33Q8NG76 320 aa20.37■□□□□ 0.85
PNKP-220ENST00000627232 RPL3LQ92901 407 aaKnown RBP20.37■□□□□ 0.85
PNKP-220ENST00000627232 ZNF501Q96CX3 271 aaPredicted RBP20.37■□□□□ 0.85
PNKP-220ENST00000627232 SENP5Q96HI0 755 aaPredicted RBP20.37■□□□□ 0.85
PNKP-220ENST00000627232 SLC46A1Q96NT5 459 aa20.37■□□□□ 0.85
PNKP-220ENST00000627232 OR5M11Q96RB7 305 aa20.37■□□□□ 0.85
PNKP-220ENST00000627232 FGF20Q9NP95 211 aaPredicted RBP20.37■□□□□ 0.85
PNKP-220ENST00000627232 DHCR7Q9UBM7 475 aaKnown RBP20.37■□□□□ 0.85
PNKP-220ENST00000627232 PILRBQ9UKJ0 227 aa20.37■□□□□ 0.85
PNKP-220ENST00000627232 PCDHGA3Q9Y5H0 932 aa20.37■□□□□ 0.85
PNKP-220ENST00000627232 CDC42EP2O14613 210 aa20.36■□□□□ 0.85
PNKP-220ENST00000627232 SURF4O15260 269 aa20.36■□□□□ 0.85
PNKP-220ENST00000627232 FOXD2O60548 495 aaPredicted RBP20.36■□□□□ 0.85
PNKP-220ENST00000627232 IFI30P13284 250 aa20.36■□□□□ 0.85
PNKP-220ENST00000627232 MYF5P13349 255 aa20.36■□□□□ 0.85
PNKP-220ENST00000627232 GADD45AP24522 165 aa20.36■□□□□ 0.85
PNKP-220ENST00000627232 PPICP45877 212 aa20.36■□□□□ 0.85
PNKP-220ENST00000627232 RNF144AP50876 292 aaPredicted RBP20.36■□□□□ 0.85
PNKP-220ENST00000627232 RAB40BQ12829 278 aa20.36■□□□□ 0.85
PNKP-220ENST00000627232 NR0B2Q15466 257 aa20.36■□□□□ 0.85
PNKP-220ENST00000627232 CLEC12AQ5QGZ9 265 aa20.36■□□□□ 0.85
PNKP-220ENST00000627232 TMEM71Q6P5X7 295 aa20.36■□□□□ 0.85
PNKP-220ENST00000627232 NANOGP1Q8N7R0 232 aa20.36■□□□□ 0.85
PNKP-220ENST00000627232 ANKK1Q8NFD2 765 aa20.36■□□□□ 0.85
PNKP-220ENST00000627232 OR52I1Q8NGK6 324 aa20.36■□□□□ 0.85
PNKP-220ENST00000627232 ZDHHC19Q8WVZ1 309 aaPredicted RBP20.36■□□□□ 0.85
PNKP-220ENST00000627232 BORCS5Q969J3 196 aa20.36■□□□□ 0.85
PNKP-220ENST00000627232 ZHX1-C8orf76Q96EF9 292 aa20.36■□□□□ 0.85
PNKP-220ENST00000627232 VMP1Q96GC9 406 aa20.36■□□□□ 0.85
PNKP-220ENST00000627232 HOXD1Q9GZZ0 328 aa20.36■□□□□ 0.85
PNKP-220ENST00000627232 PNO1Q9NRX1 252 aaKnown RBP20.36■□□□□ 0.85
PNKP-220ENST00000627232 SIDT1Q9NXL6 827 aaKnown RBP20.36■□□□□ 0.85
PNKP-220ENST00000627232 FLRT3Q9NZU0 649 aa20.36■□□□□ 0.85
PNKP-220ENST00000627232 A0A1B0GWA3 101 aa20.35■□□□□ 0.85
PNKP-220ENST00000627232 A0A1B0GX78 115 aa20.35■□□□□ 0.85
PNKP-220ENST00000627232 EFCAB7A8K855 629 aa20.35■□□□□ 0.85
PNKP-220ENST00000627232 A8MU76 341 aa20.35■□□□□ 0.85
PNKP-220ENST00000627232 POLR1CO15160 346 aaPredicted RBP20.35■□□□□ 0.85
PNKP-220ENST00000627232 GRK5P34947 590 aa20.35■□□□□ 0.85
PNKP-220ENST00000627232 SLC37A1P57057 533 aa20.35■□□□□ 0.85
PNKP-220ENST00000627232 TIMM50Q3ZCQ8 353 aa20.35■□□□□ 0.85
PNKP-220ENST00000627232 C3orf38Q5JPI3 329 aa20.35■□□□□ 0.85
PNKP-220ENST00000627232 SLC30A6Q6NXT4 461 aa20.35■□□□□ 0.85
PNKP-220ENST00000627232 ZNF440Q8IYI8 595 aa20.35■□□□□ 0.85
PNKP-220ENST00000627232 SLC34A3Q8N130 599 aa20.35■□□□□ 0.85
PNKP-220ENST00000627232 OR4C6Q8NH72 309 aa20.35■□□□□ 0.85
PNKP-220ENST00000627232 PFN4Q8NHR9 129 aa20.35■□□□□ 0.85
PNKP-220ENST00000627232 RFKQ969G6 155 aa20.35■□□□□ 0.85
PNKP-220ENST00000627232 PLEKHA8Q96JA3 519 aa20.35■□□□□ 0.85
PNKP-220ENST00000627232 SAMD8Q96LT4 415 aa20.35■□□□□ 0.85
PNKP-220ENST00000627232 ZNF426Q9BUY5 554 aa20.35■□□□□ 0.85
PNKP-220ENST00000627232 DPH1Q9BZG8 443 aa20.35■□□□□ 0.85
PNKP-220ENST00000627232 OR52D1Q9H346 318 aa20.35■□□□□ 0.85
PNKP-220ENST00000627232 SYNDIG1LA6NDD5 238 aa20.34■□□□□ 0.85
PNKP-220ENST00000627232 SERINC4A6NH21 518 aa20.34■□□□□ 0.85
PNKP-220ENST00000627232 CCRL2O00421 344 aa20.34■□□□□ 0.85
PNKP-220ENST00000627232 RCBTB2O95199 551 aa20.34■□□□□ 0.85
PNKP-220ENST00000627232 SCG5P05408 212 aa20.34■□□□□ 0.85
PNKP-220ENST00000627232 HSMCR30P0CW71 290 aa20.34■□□□□ 0.85
PNKP-220ENST00000627232 MAKP20794 623 aa20.34■□□□□ 0.85
PNKP-220ENST00000627232 RORAP35398 523 aa20.34■□□□□ 0.85
PNKP-220ENST00000627232 LIMK1P53667 647 aa20.34■□□□□ 0.85
PNKP-220ENST00000627232 GAS1P54826 345 aa20.34■□□□□ 0.85
PNKP-220ENST00000627232 MLLT10P55197 1068 aa20.34■□□□□ 0.85
PNKP-220ENST00000627232 ZXDAP98168 799 aa20.34■□□□□ 0.85
PNKP-220ENST00000627232 ELAVL1Q15717 326 aaKnown RBP20.34■□□□□ 0.85
PNKP-220ENST00000627232 USP43Q70EL4 1123 aa20.34■□□□□ 0.85
PNKP-220ENST00000627232 SLITRK4Q8IW52 837 aa20.34■□□□□ 0.85
PNKP-220ENST00000627232 ZSCAN1Q8NBB4 408 aa20.34■□□□□ 0.85
PNKP-220ENST00000627232 OR52L1Q8NGH7 329 aa20.34■□□□□ 0.85
PNKP-220ENST00000627232 RNF217Q8TC41 542 aa20.34■□□□□ 0.85
PNKP-220ENST00000627232 FANK1Q8TC84 345 aa20.34■□□□□ 0.85
PNKP-220ENST00000627232 BPIFA2Q96DR5 249 aa20.34■□□□□ 0.85
PNKP-220ENST00000627232 ART5Q96L15 291 aa20.34■□□□□ 0.85
PNKP-220ENST00000627232 NUDT22Q9BRQ3 303 aa20.34■□□□□ 0.85
PNKP-220ENST00000627232 TAPBPLQ9BX59 468 aa20.34■□□□□ 0.85
PNKP-220ENST00000627232 HHATLQ9HCP6 504 aa20.34■□□□□ 0.85
PNKP-220ENST00000627232 FGF21Q9NSA1 209 aa20.34■□□□□ 0.85
PNKP-220ENST00000627232 OSGIN1Q9UJX0 560 aa20.34■□□□□ 0.85
PNKP-220ENST00000627232 SLC35A3Q9Y2D2 325 aa20.34■□□□□ 0.85
PNKP-220ENST00000627232 TCRBV16S1A1N1A0A5B0 115 aa20.33■□□□□ 0.85
PNKP-220ENST00000627232 YKT6O15498 198 aa20.33■□□□□ 0.85
PNKP-220ENST00000627232 CSO75390 466 aaKnown RBP20.33■□□□□ 0.85
PNKP-220ENST00000627232 NADKO95544 446 aaPredicted RBP20.33■□□□□ 0.85
PNKP-220ENST00000627232 IL33O95760 270 aa20.33■□□□□ 0.85
PNKP-220ENST00000627232 ANKRD34CP0C6C1 535 aa20.33■□□□□ 0.85
PNKP-220ENST00000627232 ADH7P40394 386 aa20.33■□□□□ 0.85
PNKP-220ENST00000627232 BMXP51813 675 aa20.33■□□□□ 0.85
PNKP-220ENST00000627232 SPHARQ15513 63 aa20.33■□□□□ 0.85
PNKP-220ENST00000627232 LINC00114Q6XXX2 140 aa20.33■□□□□ 0.85
PNKP-220ENST00000627232 BMP8AQ7Z5Y6 402 aa20.33■□□□□ 0.85
PNKP-220ENST00000627232 SLC43A2Q8N370 569 aa20.33■□□□□ 0.85
PNKP-220ENST00000627232 KBTBD8Q8NFY9 601 aa20.33■□□□□ 0.85
PNKP-220ENST00000627232 SAP25Q8TEE9 199 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms