RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 LIPT1Q9Y234 373 aa6.57□□□□□ -1.36
NPLOC4-221ENST00000625705 VDAC3Q9Y277 283 aa6.57□□□□□ -1.36
NPLOC4-221ENST00000625705 KCNE3Q9Y6H6 103 aa6.57□□□□□ -1.36
NPLOC4-221ENST00000625705 DSPP15924 2871 aaKnown RBP6.57□□□□□ -1.36
NPLOC4-221ENST00000625705 SHANK1Q9Y566 2161 aa6.57□□□□□ -1.36
NPLOC4-221ENST00000625705 A0A1W2PQD3 144 aa6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 GMNCA6NCL1 334 aa6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 BBIP1A8MTZ0 92 aa6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 H3BML4 177 aa6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 HMGN4O00479 90 aa6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 MRASO14807 208 aa6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 SEC14L5O43304 696 aa6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 WDR1O75083 606 aa6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 SEMA7AO75326 666 aa6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 TNFRSF21O75509 655 aa6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 WISP2O76076 250 aa6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 H6PDO95479 791 aa6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 ACTL6AO96019 429 aa6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 IGHG3P01860 377 aa6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 HPNP05981 417 aa6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 UBTFL6P0CB48 400 aaPredicted RBP6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 GABRA1P14867 456 aa6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 POU3F2P20265 443 aaPredicted RBP6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 ME2P23368 584 aa6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 ACVR2AP27037 513 aa6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 MAP3K8P41279 467 aa6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 MAGEA8P43361 318 aa6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 CRISP3P54108 245 aa6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 KLF10Q13118 480 aa6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 GCNT6Q5T4J0 391 aa6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 FNDC7Q5VTL7 733 aa6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 TMEM211Q6ICI0 200 aa6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 CGB2Q6NT52 195 aa6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 EIF3MQ7L2H7 374 aaKnown RBP6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 OLIG3Q7RTU3 272 aa6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 MTERF4Q7Z6M4 381 aaKnown RBP6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 HMGN2P46Q86SG4 172 aa6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 SNX32Q86XE0 403 aa6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 FUNDC1Q8IVP5 155 aa6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 PEX5LQ8IYB4 626 aa6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 UBQLNLQ8IYU4 475 aa6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 ANKFN1Q8N957 763 aa6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 WDSUB1Q8N9V3 476 aa6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 PCYOX1LQ8NBM8 494 aa6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 TOR1AIP2Q8NFQ8 470 aa6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 OR2M3Q8NG83 312 aa6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 B4GALNT2Q8NHY0 566 aa6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 FAM110BQ8TC76 370 aa6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 ZFP90Q8TF47 636 aa6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 C10orf82Q8WW14 230 aa6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 GTF2H4Q92759 462 aa6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 ABTB1Q969K4 478 aaPredicted RBP6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 ZNF317Q96PQ6 595 aaPredicted RBP6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 TRNT1Q96Q11 434 aaKnown RBP6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 PIGQQ9BRB3 760 aa6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 OR2B2Q9GZK3 357 aa6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 NMUR2Q9GZQ4 415 aa6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 ZNF350Q9GZX5 532 aa6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 PAIP1Q9H074 479 aaKnown RBP6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 ARMC7Q9H6L4 198 aa6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 SLC6A13Q9NSD5 602 aa6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 PNPLA3Q9NST1 481 aa6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 COQ3Q9NZJ6 369 aa6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 SPRR3Q9UBC9 169 aa6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 ERRFI1Q9UJM3 462 aaPredicted RBP6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 SLC13A4Q9UKG4 626 aa6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 CARD8Q9Y2G2 431 aa6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 DTNAQ9Y4J8 743 aa6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 PCDHB14Q9Y5E9 798 aa6.56□□□□□ -1.36
NPLOC4-221ENST00000625705 LOC400499M0QZD8 3231 aa6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 NCKAP5O14513 1909 aa6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 NINQ8N4C6 2090 aa6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 A0A087WZY1 265 aa6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 A0A1B0GVC2 190 aa6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 A1L4Q6 167 aa6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 SERINC4A6NH21 518 aa6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 C17orf51A8MQB3 221 aa6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 E9PLN8 166 aa6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 ZNF264O43296 627 aa6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 KIAA0513O60268 411 aa6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 FCMRO60667 390 aa6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 ZG16O60844 167 aa6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 UQCRBP14927 111 aa6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 IL7RP16871 459 aa6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 EPHA1P21709 976 aa6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 ADSLP30566 484 aaPredicted RBP6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 ZFP36L2P47974 494 aaKnown RBP6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 P2RX1P51575 399 aa6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 GAS1P54826 345 aa6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 SUMO3P55854 103 aaPredicted RBP6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 ZNF117Q03924 483 aa6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 FADDQ13158 208 aa6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 CBFBQ13951 182 aa6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 CYLC2Q14093 348 aaPredicted RBP6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 CAPRIN1Q14444 709 aaKnown RBP6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 LARS2Q15031 903 aaKnown RBP6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 RGNQ15493 299 aa6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 CD226Q15762 336 aa6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 SYPL1Q16563 259 aa6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 NDUFAF6Q330K2 333 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms