RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, human

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LITAF-221	ENST00000622633	FTMT	Q8N4E7	242 aa		11.64	□□□□□ -0.55
LITAF-221	ENST00000622633	SCMH1	Q96GD3	660 aa		11.64	□□□□□ -0.55
LITAF-221	ENST00000622633	KCNJ15	Q99712	375 aa		11.64	□□□□□ -0.55
LITAF-221	ENST00000622633	NRTN	Q99748	197 aa		11.64	□□□□□ -0.55
LITAF-221	ENST00000622633	MAPKAP1	Q9BPZ7	522 aa		11.64	□□□□□ -0.55
LITAF-221	ENST00000622633	NT5DC2	Q9H857	520 aa		11.64	□□□□□ -0.55
LITAF-221	ENST00000622633	C11orf16	Q9NQ32	467 aa		11.64	□□□□□ -0.55
LITAF-221	ENST00000622633	MIEF1	Q9NQG6	463 aa		11.64	□□□□□ -0.55
LITAF-221	ENST00000622633	TDP1	Q9NUW8	608 aa		11.64	□□□□□ -0.55
LITAF-221	ENST00000622633	CLN6	Q9NWW5	311 aa		11.64	□□□□□ -0.55
LITAF-221	ENST00000622633	GDE1	Q9NZC3	331 aa		11.64	□□□□□ -0.55
LITAF-221	ENST00000622633	VSX1	Q9NZR4	365 aa	Predicted RBP	11.64	□□□□□ -0.55
LITAF-221	ENST00000622633	MARK1	Q9P0L2	795 aa		11.64	□□□□□ -0.55
LITAF-221	ENST00000622633	TAAR2	Q9P1P5	351 aa		11.64	□□□□□ -0.55
LITAF-221	ENST00000622633	MEX3A	A1L020	520 aa	Known RBP	11.63	□□□□□ -0.55
LITAF-221	ENST00000622633	OR6C74	A6NCV1	312 aa		11.63	□□□□□ -0.55
LITAF-221	ENST00000622633	ZAR1L	A6NP61	321 aa		11.63	□□□□□ -0.55
LITAF-221	ENST00000622633		A8MVJ9	347 aa		11.63	□□□□□ -0.55
LITAF-221	ENST00000622633	KPNA3	O00505	521 aa	Predicted RBP	11.63	□□□□□ -0.55
LITAF-221	ENST00000622633	IFNW1	P05000	195 aa		11.63	□□□□□ -0.55
LITAF-221	ENST00000622633	SRPRA	P08240	638 aa	Known RBP	11.63	□□□□□ -0.55
LITAF-221	ENST00000622633	RPL3	P39023	403 aa	Known RBP	11.63	□□□□□ -0.55
LITAF-221	ENST00000622633	FEN1	P39748	380 aa	Known RBP	11.63	□□□□□ -0.55
LITAF-221	ENST00000622633	LIM2	P55344	173 aa		11.63	□□□□□ -0.55
LITAF-221	ENST00000622633	SSX1	Q16384	188 aa		11.63	□□□□□ -0.55
LITAF-221	ENST00000622633	BICRAL	Q6AI39	1079 aa		11.63	□□□□□ -0.55
LITAF-221	ENST00000622633	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	11.63	□□□□□ -0.55
LITAF-221	ENST00000622633	SLC39A5	Q6ZMH5	540 aa		11.63	□□□□□ -0.55
LITAF-221	ENST00000622633	ANKRD33	Q7Z3H0	272 aa		11.63	□□□□□ -0.55
LITAF-221	ENST00000622633	LRRC56	Q8IYG6	542 aa	Predicted RBP	11.63	□□□□□ -0.55
LITAF-221	ENST00000622633		Q8N402	240 aa		11.63	□□□□□ -0.55
LITAF-221	ENST00000622633	TMIE	Q8NEW7	156 aa		11.63	□□□□□ -0.55
LITAF-221	ENST00000622633	MOSPD2	Q8NHP6	518 aa		11.63	□□□□□ -0.55
LITAF-221	ENST00000622633	TRMT10A	Q8TBZ6	339 aa	Known RBP	11.63	□□□□□ -0.55
LITAF-221	ENST00000622633	MSLNL	Q96KJ4	702 aa		11.63	□□□□□ -0.55
LITAF-221	ENST00000622633	CAPNS2	Q96L46	248 aa		11.63	□□□□□ -0.55
LITAF-221	ENST00000622633	TMEM43	Q9BTV4	400 aa		11.63	□□□□□ -0.55
LITAF-221	ENST00000622633	CDCA4	Q9BXL8	241 aa		11.63	□□□□□ -0.55
LITAF-221	ENST00000622633	B3GAT2	Q9NPZ5	323 aa		11.63	□□□□□ -0.55
LITAF-221	ENST00000622633	DHCR7	Q9UBM7	475 aa	Known RBP	11.63	□□□□□ -0.55
LITAF-221	ENST00000622633	KIAA1671	Q9BY89	1806 aa		11.63	□□□□□ -0.55
LITAF-221	ENST00000622633	MKI67	P46013	3256 aa	Known RBP	11.63	□□□□□ -0.55
LITAF-221	ENST00000622633	DENND4C	Q5VZ89	1909 aa		11.63	□□□□□ -0.55
LITAF-221	ENST00000622633	ENTPD6	O75354	484 aa		11.63	□□□□□ -0.55
LITAF-221	ENST00000622633	MOSPD3	O75425	235 aa		11.63	□□□□□ -0.55
LITAF-221	ENST00000622633	UBXN7	O94888	489 aa		11.63	□□□□□ -0.55
LITAF-221	ENST00000622633	SOX30	O94993	753 aa		11.63	□□□□□ -0.55
LITAF-221	ENST00000622633	SOX14	O95416	240 aa		11.63	□□□□□ -0.55
LITAF-221	ENST00000622633	SIX6	O95475	246 aa		11.63	□□□□□ -0.55
LITAF-221	ENST00000622633	SOD1	P00441	154 aa		11.63	□□□□□ -0.55
LITAF-221	ENST00000622633	MAPK9	P45984	424 aa		11.63	□□□□□ -0.55
LITAF-221	ENST00000622633	TSPAN5	P62079	268 aa		11.63	□□□□□ -0.55
LITAF-221	ENST00000622633	SF3A2	Q15428	464 aa	Known RBP	11.63	□□□□□ -0.55
LITAF-221	ENST00000622633	CD276	Q5ZPR3	534 aa		11.63	□□□□□ -0.55
LITAF-221	ENST00000622633	PLAG1	Q6DJT9	500 aa		11.63	□□□□□ -0.55
LITAF-221	ENST00000622633	ZNF770	Q6IQ21	691 aa	Predicted RBP	11.63	□□□□□ -0.55
LITAF-221	ENST00000622633	ALKAL2	Q6UX46	152 aa		11.63	□□□□□ -0.55
LITAF-221	ENST00000622633	CEACAM20	Q6UY09	585 aa		11.63	□□□□□ -0.55
LITAF-221	ENST00000622633	ZNF511	Q8NB15	262 aa		11.63	□□□□□ -0.55
LITAF-221	ENST00000622633	RSPO3	Q9BXY4	272 aa	Predicted RBP	11.63	□□□□□ -0.55
LITAF-221	ENST00000622633	NLN	Q9BYT8	704 aa		11.63	□□□□□ -0.55
LITAF-221	ENST00000622633	CLCA2	Q9UQC9	943 aa		11.63	□□□□□ -0.55
LITAF-221	ENST00000622633	PRKAB1	Q9Y478	270 aa		11.63	□□□□□ -0.55
LITAF-221	ENST00000622633	PLXNA2	O75051	1894 aa		11.62	□□□□□ -0.55
LITAF-221	ENST00000622633	FAM221B	A6H8Z2	402 aa		11.62	□□□□□ -0.55
LITAF-221	ENST00000622633	PHYH	O14832	338 aa		11.62	□□□□□ -0.55
LITAF-221	ENST00000622633	KIAA0355	O15063	1070 aa		11.62	□□□□□ -0.55
LITAF-221	ENST00000622633	LZTS3	O60299	673 aa	Predicted RBP	11.62	□□□□□ -0.55
LITAF-221	ENST00000622633	MB	P02144	154 aa		11.62	□□□□□ -0.55
LITAF-221	ENST00000622633	RAC2	P15153	192 aa		11.62	□□□□□ -0.55
LITAF-221	ENST00000622633	UQCRC2	P22695	453 aa		11.62	□□□□□ -0.55
LITAF-221	ENST00000622633	CALCR	P30988	508 aa		11.62	□□□□□ -0.55
LITAF-221	ENST00000622633	LRRC32	Q14392	662 aa		11.62	□□□□□ -0.55
LITAF-221	ENST00000622633	HABP2	Q14520	560 aa	Predicted RBP	11.62	□□□□□ -0.55
LITAF-221	ENST00000622633	MANEA	Q5SRI9	462 aa		11.62	□□□□□ -0.55
LITAF-221	ENST00000622633	REEP3	Q6NUK4	255 aa		11.62	□□□□□ -0.55
LITAF-221	ENST00000622633	TMIGD1	Q6UXZ0	262 aa		11.62	□□□□□ -0.55
LITAF-221	ENST00000622633	HORMAD2	Q8N7B1	307 aa		11.62	□□□□□ -0.55
LITAF-221	ENST00000622633	FBXO15	Q8NCQ5	510 aa	Predicted RBP	11.62	□□□□□ -0.55
LITAF-221	ENST00000622633	C9orf43	Q8TAL5	461 aa	Predicted RBP	11.62	□□□□□ -0.55
LITAF-221	ENST00000622633	SLC38A5	Q8WUX1	472 aa		11.62	□□□□□ -0.55
LITAF-221	ENST00000622633	RAB8B	Q92930	207 aa		11.62	□□□□□ -0.55
LITAF-221	ENST00000622633	DTD2	Q96FN9	168 aa		11.62	□□□□□ -0.55
LITAF-221	ENST00000622633	KATNB1	Q9BVA0	655 aa		11.62	□□□□□ -0.55
LITAF-221	ENST00000622633	PPP1R3E	Q9H7J1	279 aa		11.62	□□□□□ -0.55
LITAF-221	ENST00000622633	SYNDIG1	Q9H7V2	258 aa		11.62	□□□□□ -0.55
LITAF-221	ENST00000622633	CLEC2D	Q9UHP7	191 aa		11.62	□□□□□ -0.55
LITAF-221	ENST00000622633	CA14	Q9ULX7	337 aa		11.62	□□□□□ -0.55
LITAF-221	ENST00000622633	ISM1	B1AKI9	464 aa		11.62	□□□□□ -0.55
LITAF-221	ENST00000622633	SDC3	O75056	442 aa		11.62	□□□□□ -0.55
LITAF-221	ENST00000622633	STX11	O75558	287 aa		11.62	□□□□□ -0.55
LITAF-221	ENST00000622633	TOX	O94900	526 aa		11.62	□□□□□ -0.55
LITAF-221	ENST00000622633	AKR7A3	O95154	331 aa		11.62	□□□□□ -0.55
LITAF-221	ENST00000622633	BCHE	P06276	602 aa		11.62	□□□□□ -0.55
LITAF-221	ENST00000622633	GNG10	P50151	68 aa		11.62	□□□□□ -0.55
LITAF-221	ENST00000622633	HNRNPK	P61978	463 aa	Known RBP eCLIP	11.62	□□□□□ -0.55	6e-8	■□□□□ 11.1
LITAF-221	ENST00000622633	WDR53	Q7Z5U6	358 aa	Predicted RBP	11.62	□□□□□ -0.55
LITAF-221	ENST00000622633	RBM45	Q8IUH3	476 aa	Known RBP	11.62	□□□□□ -0.55
LITAF-221	ENST00000622633	NRSN1	Q8IZ57	195 aa		11.62	□□□□□ -0.55
LITAF-221	ENST00000622633	GPR32P1	Q8NGA4	272 aa		11.62	□□□□□ -0.55

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