RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 RNF122Q9H9V4 155 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 SRA1Q9HD15 236 aaKnown RBP7.41□□□□□ -1.22
VPS11-209ENST00000622309 TVP23BQ9NYZ1 205 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 LHX6Q9UPM6 363 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 EVPLQ92817 2033 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 PARP14Q460N5 1801 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 MANSC4A6NHS7 340 aaPredicted RBP7.41□□□□□ -1.22
VPS11-209ENST00000622309 ZNF705EA8MWA4 302 aaPredicted RBP7.41□□□□□ -1.22
VPS11-209ENST00000622309 MAGEB17A8MXT2 336 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 DLL1O00548 723 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 HCRTO43612 131 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 IFNA10P01566 189 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 ANXA2P07355 339 aaKnown RBP7.41□□□□□ -1.22
VPS11-209ENST00000622309 CPN1P15169 458 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 MGMTP16455 207 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 CERS1P27544 350 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 IRS1P35568 1242 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 STAT5AP42229 794 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 CDC34P49427 236 aaPredicted RBP7.41□□□□□ -1.22
VPS11-209ENST00000622309 MVDP53602 400 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 SELENOWP63302 87 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 PRR5P85299 388 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 MAT1AQ00266 395 aaKnown RBP7.41□□□□□ -1.22
VPS11-209ENST00000622309 ELAVL2Q12926 359 aaKnown RBP7.41□□□□□ -1.22
VPS11-209ENST00000622309 GTF2H2Q13888 395 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 RBM39Q14498 530 aaKnown RBP7.41□□□□□ -1.22
VPS11-209ENST00000622309 TMEM201Q5SNT2 666 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 HBMQ6B0K9 141 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 PTRHD1Q6GMV3 140 aaKnown RBP7.41□□□□□ -1.22
VPS11-209ENST00000622309 OR52W1Q6IF63 320 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 GTF2H2CQ6P1K8 395 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 GOLGA7Q7Z5G4 137 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 SLC44A3Q8N4M1 653 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 C15orf54Q8N8G6 183 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 BMPERQ8N8U9 685 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 ZNF511Q8NB15 262 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 C3orf49Q96BT1 292 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 WDR89Q96FK6 387 aaPredicted RBP7.41□□□□□ -1.22
VPS11-209ENST00000622309 COPS8Q99627 209 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 GPR20Q99678 358 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 ZNF559Q9BR84 538 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 METTL9Q9H1A3 318 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 BARX1Q9HBU1 254 aaPredicted RBP7.41□□□□□ -1.22
VPS11-209ENST00000622309 MRPL15Q9P015 296 aaKnown RBP7.41□□□□□ -1.22
VPS11-209ENST00000622309 CARHSP1Q9Y2V2 147 aaKnown RBP7.41□□□□□ -1.22
VPS11-209ENST00000622309 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.4□□□□□ -1.22
VPS11-209ENST00000622309 KANTRA0A1W2PQU2 76 aa7.4□□□□□ -1.22
VPS11-209ENST00000622309 TMEM72A0PK05 275 aa7.4□□□□□ -1.22
VPS11-209ENST00000622309 C2orf78A6NCI8 922 aa7.4□□□□□ -1.22
VPS11-209ENST00000622309 MED6O75586 246 aa7.4□□□□□ -1.22
VPS11-209ENST00000622309 SC5DO75845 299 aa7.4□□□□□ -1.22
VPS11-209ENST00000622309 FARS2O95363 451 aaKnown RBP7.4□□□□□ -1.22
VPS11-209ENST00000622309 LATS1O95835 1130 aa7.4□□□□□ -1.22
VPS11-209ENST00000622309 HCKP08631 526 aa7.4□□□□□ -1.22
VPS11-209ENST00000622309 POU2F2P09086 479 aa7.4□□□□□ -1.22
VPS11-209ENST00000622309 OR8U8P0C7N1 319 aa7.4□□□□□ -1.22
VPS11-209ENST00000622309 STAG3L1P0CL83 205 aa7.4□□□□□ -1.22
VPS11-209ENST00000622309 BDKRB2P30411 391 aa7.4□□□□□ -1.22
VPS11-209ENST00000622309 CCR7P32248 378 aa7.4□□□□□ -1.22
VPS11-209ENST00000622309 KIR3DL1P43629 444 aa7.4□□□□□ -1.22
VPS11-209ENST00000622309 TIAL1Q01085 375 aaKnown RBP eCLIP7.4□□□□□ -1.22
VPS11-209ENST00000622309 ADIGQ0VDE8 80 aa7.4□□□□□ -1.22
VPS11-209ENST00000622309 BIKQ13323 160 aa7.4□□□□□ -1.22
VPS11-209ENST00000622309 ZNF177Q13360 481 aaPredicted RBP7.4□□□□□ -1.22
VPS11-209ENST00000622309 GINS1Q14691 196 aa7.4□□□□□ -1.22
VPS11-209ENST00000622309 SLC9A5Q14940 896 aa7.4□□□□□ -1.22
VPS11-209ENST00000622309 NCMAPQ5T1S8 102 aa7.4□□□□□ -1.22
VPS11-209ENST00000622309 MTFR2Q6P444 385 aa7.4□□□□□ -1.22
VPS11-209ENST00000622309 TMEM71Q6P5X7 295 aa7.4□□□□□ -1.22
VPS11-209ENST00000622309 SLC30A8Q8IWU4 369 aa7.4□□□□□ -1.22
VPS11-209ENST00000622309 SLC39A7Q92504 469 aa7.4□□□□□ -1.22
VPS11-209ENST00000622309 PNPLA2Q96AD5 504 aa7.4□□□□□ -1.22
VPS11-209ENST00000622309 NPY6RQ99463 290 aa7.4□□□□□ -1.22
VPS11-209ENST00000622309 GPR21Q99679 349 aa7.4□□□□□ -1.22
VPS11-209ENST00000622309 TSPAN10Q9H1Z9 355 aaPredicted RBP7.4□□□□□ -1.22
VPS11-209ENST00000622309 NMNAT1Q9HAN9 279 aaPredicted RBP7.4□□□□□ -1.22
VPS11-209ENST00000622309 C2orf42Q9NWW7 574 aa7.4□□□□□ -1.22
VPS11-209ENST00000622309 TMEM161AQ9NX61 479 aa7.4□□□□□ -1.22
VPS11-209ENST00000622309 RASD1Q9Y272 281 aa7.4□□□□□ -1.22
VPS11-209ENST00000622309 PCDHB9Q9Y5E1 797 aa7.4□□□□□ -1.22
VPS11-209ENST00000622309 SNX10Q9Y5X0 201 aa7.4□□□□□ -1.22
VPS11-209ENST00000622309 A0A0G2JLL6 359 aaPredicted RBP7.4□□□□□ -1.22
VPS11-209ENST00000622309 SHISA3A0PJX4 238 aa7.4□□□□□ -1.22
VPS11-209ENST00000622309 PGRMC2O15173 223 aa7.4□□□□□ -1.22
VPS11-209ENST00000622309 TGM5O43548 720 aa7.4□□□□□ -1.22
VPS11-209ENST00000622309 KLK8O60259 260 aa7.4□□□□□ -1.22
VPS11-209ENST00000622309 PTBP3O95758 552 aaKnown RBP7.4□□□□□ -1.22
VPS11-209ENST00000622309 CTSHP09668 335 aa7.4□□□□□ -1.22
VPS11-209ENST00000622309 SBK2P0C263 348 aa7.4□□□□□ -1.22
VPS11-209ENST00000622309 GPX2P18283 190 aa7.4□□□□□ -1.22
VPS11-209ENST00000622309 RPL3P39023 403 aaKnown RBP7.4□□□□□ -1.22
VPS11-209ENST00000622309 METAP1P53582 386 aa7.4□□□□□ -1.22
VPS11-209ENST00000622309 SKP1P63208 163 aa7.4□□□□□ -1.22
VPS11-209ENST00000622309 HTRA4P83105 476 aaPredicted RBP7.4□□□□□ -1.22
VPS11-209ENST00000622309 DYRK1AQ13627 763 aa7.4□□□□□ -1.22
VPS11-209ENST00000622309 HYAL4Q2M3T9 481 aa7.4□□□□□ -1.22
VPS11-209ENST00000622309 FAM69AQ5T7M9 428 aa7.4□□□□□ -1.22
VPS11-209ENST00000622309 KIAA1161Q6NSJ0 714 aa7.4□□□□□ -1.22
VPS11-209ENST00000622309 CD200R1LQ6Q8B3 271 aa7.4□□□□□ -1.22
VPS11-209ENST00000622309 GLDNQ6ZMI3 551 aaPredicted RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms