RNA–Protein interactions for RNA: ENST00000622057.4

TARDBP-227, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-227ENST00000622057 HS3ST1O14792 307 aa8.31□□□□□ -1.08
TARDBP-227ENST00000622057 LSM1O15116 133 aaKnown RBP8.31□□□□□ -1.08
TARDBP-227ENST00000622057 CLOCKO15516 846 aa8.31□□□□□ -1.08
TARDBP-227ENST00000622057 EFNA2O43921 213 aa8.31□□□□□ -1.08
TARDBP-227ENST00000622057 ADAP00813 363 aa8.31□□□□□ -1.08
TARDBP-227ENST00000622057 HMGN2P05204 90 aaKnown RBP8.31□□□□□ -1.08
TARDBP-227ENST00000622057 LINGO3P0C6S8 592 aa8.31□□□□□ -1.08
TARDBP-227ENST00000622057 NPIPA8P0DM63 369 aa8.31□□□□□ -1.08
TARDBP-227ENST00000622057 NEFHP12036 1026 aa8.31□□□□□ -1.08
TARDBP-227ENST00000622057 KRT4P19013 534 aa8.31□□□□□ -1.08
TARDBP-227ENST00000622057 PSMB1P20618 241 aaKnown RBP8.31□□□□□ -1.08
TARDBP-227ENST00000622057 ATP6V1C1P21283 382 aa8.31□□□□□ -1.08
TARDBP-227ENST00000622057 IL32P24001 234 aa8.31□□□□□ -1.08
TARDBP-227ENST00000622057 SHC1P29353 583 aa8.31□□□□□ -1.08
TARDBP-227ENST00000622057 AGTR1P30556 359 aa8.31□□□□□ -1.08
TARDBP-227ENST00000622057 LCN1P31025 176 aa8.31□□□□□ -1.08
TARDBP-227ENST00000622057 EIF1P41567 113 aaKnown RBP8.31□□□□□ -1.08
TARDBP-227ENST00000622057 FRKP42685 505 aaPredicted RBP8.31□□□□□ -1.08
TARDBP-227ENST00000622057 FOXF1Q12946 379 aa8.31□□□□□ -1.08
TARDBP-227ENST00000622057 TNK1Q13470 666 aa8.31□□□□□ -1.08
TARDBP-227ENST00000622057 CAPRIN1Q14444 709 aaKnown RBP8.31□□□□□ -1.08
TARDBP-227ENST00000622057 TMEM176BQ3YBM2 270 aaPredicted RBP8.31□□□□□ -1.08
TARDBP-227ENST00000622057 CBLN3Q6UW01 205 aa8.31□□□□□ -1.08
TARDBP-227ENST00000622057 R3HCC1LQ7Z5L2 792 aaKnown RBP8.31□□□□□ -1.08
TARDBP-227ENST00000622057 CNPY4Q8N129 248 aa8.31□□□□□ -1.08
TARDBP-227ENST00000622057 ZNF619Q8N2I2 560 aa8.31□□□□□ -1.08
TARDBP-227ENST00000622057 MAPK1IP1LQ8NDC0 245 aa8.31□□□□□ -1.08
TARDBP-227ENST00000622057 STEAP2Q8NFT2 490 aa8.31□□□□□ -1.08
TARDBP-227ENST00000622057 RFWD2Q8NHY2 731 aa8.31□□□□□ -1.08
TARDBP-227ENST00000622057 FBXO27Q8NI29 283 aa8.31□□□□□ -1.08
TARDBP-227ENST00000622057 KIF18AQ8NI77 898 aa8.31□□□□□ -1.08
TARDBP-227ENST00000622057 ADAMTS15Q8TE58 950 aa8.31□□□□□ -1.08
TARDBP-227ENST00000622057 ABHD3Q8WU67 409 aa8.31□□□□□ -1.08
TARDBP-227ENST00000622057 CDS1Q92903 461 aa8.31□□□□□ -1.08
TARDBP-227ENST00000622057 S100PBPQ96BU1 408 aa8.31□□□□□ -1.08
TARDBP-227ENST00000622057 FAM120BQ96EK7 910 aaKnown RBP8.31□□□□□ -1.08
TARDBP-227ENST00000622057 FCRL1Q96LA6 429 aa8.31□□□□□ -1.08
TARDBP-227ENST00000622057 MDFIQ99750 246 aa8.31□□□□□ -1.08
TARDBP-227ENST00000622057 CCT7Q99832 543 aa8.31□□□□□ -1.08
TARDBP-227ENST00000622057 BTBD2Q9BX70 525 aa8.31□□□□□ -1.08
TARDBP-227ENST00000622057 HDHD5Q9BXW7 423 aa8.31□□□□□ -1.08
TARDBP-227ENST00000622057 SRXN1Q9BYN0 137 aa8.31□□□□□ -1.08
TARDBP-227ENST00000622057 OR10A4Q9H209 315 aa8.31□□□□□ -1.08
TARDBP-227ENST00000622057 PIGUQ9H490 435 aa8.31□□□□□ -1.08
TARDBP-227ENST00000622057 TIGARQ9NQ88 270 aa8.31□□□□□ -1.08
TARDBP-227ENST00000622057 NTMQ9P121 344 aa8.31□□□□□ -1.08
TARDBP-227ENST00000622057 CARD8Q9Y2G2 431 aa8.31□□□□□ -1.08
TARDBP-227ENST00000622057 TMED5Q9Y3A6 229 aa8.31□□□□□ -1.08
TARDBP-227ENST00000622057 DNAJC15Q9Y5T4 150 aa8.31□□□□□ -1.08
TARDBP-227ENST00000622057 IGHV3-15A0A0B4J1V0 119 aa8.3□□□□□ -1.08
TARDBP-227ENST00000622057 TLDC2A0PJX2 215 aa8.3□□□□□ -1.08
TARDBP-227ENST00000622057 C9JVG2 144 aa8.3□□□□□ -1.08
TARDBP-227ENST00000622057 H3BNH8 94 aa8.3□□□□□ -1.08
TARDBP-227ENST00000622057 OIP5O43482 229 aa8.3□□□□□ -1.08
TARDBP-227ENST00000622057 TRIM13O60858 407 aa8.3□□□□□ -1.08
TARDBP-227ENST00000622057 PEX11AO75192 247 aa8.3□□□□□ -1.08
TARDBP-227ENST00000622057 PRKD3O94806 890 aa8.3□□□□□ -1.08
TARDBP-227ENST00000622057 HSPA4LO95757 839 aa8.3□□□□□ -1.08
TARDBP-227ENST00000622057 CHRNGP07510 517 aa8.3□□□□□ -1.08
TARDBP-227ENST00000622057 CD3EP07766 207 aa8.3□□□□□ -1.08
TARDBP-227ENST00000622057 BCKDHAP12694 445 aa8.3□□□□□ -1.08
TARDBP-227ENST00000622057 DDX5P17844 614 aaKnown RBP8.3□□□□□ -1.08
TARDBP-227ENST00000622057 ASMTP46597 345 aa8.3□□□□□ -1.08
TARDBP-227ENST00000622057 CCT3P49368 545 aaKnown RBP8.3□□□□□ -1.08
TARDBP-227ENST00000622057 P2RX1P51575 399 aa8.3□□□□□ -1.08
TARDBP-227ENST00000622057 RPS4XP62701 263 aaKnown RBP8.3□□□□□ -1.08
TARDBP-227ENST00000622057 ZNF117Q03924 483 aa8.3□□□□□ -1.08
TARDBP-227ENST00000622057 TP53BP2Q13625 1128 aa8.3□□□□□ -1.08
TARDBP-227ENST00000622057 PDE7AQ13946 482 aa8.3□□□□□ -1.08
TARDBP-227ENST00000622057 PCLAFQ15004 111 aa8.3□□□□□ -1.08
TARDBP-227ENST00000622057 MLC1Q15049 377 aa8.3□□□□□ -1.08
TARDBP-227ENST00000622057 RNPS1Q15287 305 aaKnown RBP8.3□□□□□ -1.08
TARDBP-227ENST00000622057 TOMM34Q15785 309 aaPredicted RBP8.3□□□□□ -1.08
TARDBP-227ENST00000622057 ZNF239Q16600 458 aaKnown RBP8.3□□□□□ -1.08
TARDBP-227ENST00000622057 CLEC12BQ2HXU8 276 aa8.3□□□□□ -1.08
TARDBP-227ENST00000622057 SPDYE7PQ495Y7 208 aa8.3□□□□□ -1.08
TARDBP-227ENST00000622057 SFRP5Q5T4F7 317 aa8.3□□□□□ -1.08
TARDBP-227ENST00000622057 KANK2Q63ZY3 851 aa8.3□□□□□ -1.08
TARDBP-227ENST00000622057 CDC73Q6P1J9 531 aa8.3□□□□□ -1.08
TARDBP-227ENST00000622057 FCRLAQ7L513 359 aa8.3□□□□□ -1.08
TARDBP-227ENST00000622057 MTERF4Q7Z6M4 381 aaKnown RBP8.3□□□□□ -1.08
TARDBP-227ENST00000622057 ZNF614Q8N883 585 aa8.3□□□□□ -1.08
TARDBP-227ENST00000622057 OR7A2PQ8NGA2 310 aa8.3□□□□□ -1.08
TARDBP-227ENST00000622057 LILRB1Q8NHL6 650 aaPredicted RBP8.3□□□□□ -1.08
TARDBP-227ENST00000622057 AGR3Q8TD06 166 aa8.3□□□□□ -1.08
TARDBP-227ENST00000622057 EPS8L3Q8TE67 593 aaKnown RBP8.3□□□□□ -1.08
TARDBP-227ENST00000622057 TWIST2Q8WVJ9 160 aa8.3□□□□□ -1.08
TARDBP-227ENST00000622057 IGFBPL1Q8WX77 278 aa8.3□□□□□ -1.08
TARDBP-227ENST00000622057 NEUROG1Q92886 237 aa8.3□□□□□ -1.08
TARDBP-227ENST00000622057 CPNE4Q96A23 557 aaPredicted RBP8.3□□□□□ -1.08
TARDBP-227ENST00000622057 ZNF775Q96BV0 537 aaPredicted RBP8.3□□□□□ -1.08
TARDBP-227ENST00000622057 MTERF3Q96E29 417 aa8.3□□□□□ -1.08
TARDBP-227ENST00000622057 TRMT61AQ96FX7 289 aaKnown RBP8.3□□□□□ -1.08
TARDBP-227ENST00000622057 ZNF764Q96H86 408 aaPredicted RBP8.3□□□□□ -1.08
TARDBP-227ENST00000622057 MS4A3Q96HJ5 214 aa8.3□□□□□ -1.08
TARDBP-227ENST00000622057 STACQ99469 402 aa8.3□□□□□ -1.08
TARDBP-227ENST00000622057 TMEM204Q9BSN7 226 aa8.3□□□□□ -1.08
TARDBP-227ENST00000622057 HOXD1Q9GZZ0 328 aa8.3□□□□□ -1.08
TARDBP-227ENST00000622057 ANKZF1Q9H8Y5 726 aa8.3□□□□□ -1.08
TARDBP-227ENST00000622057 SIRT3Q9NTG7 399 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms