RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 KCNS3Q9BQ31 491 aa3.13□□□□□ -1.91
BRCA1-229ENST00000621897 C19orf43Q9BQ61 176 aa3.13□□□□□ -1.91
BRCA1-229ENST00000621897 ATG101Q9BSB4 218 aa3.13□□□□□ -1.91
BRCA1-229ENST00000621897 DNTTIP1Q9H147 329 aa3.13□□□□□ -1.91
BRCA1-229ENST00000621897 LRRC19Q9H756 370 aa3.13□□□□□ -1.91
BRCA1-229ENST00000621897 CYP3A43Q9HB55 503 aa3.13□□□□□ -1.91
BRCA1-229ENST00000621897 LY9Q9HBG7 655 aa3.13□□□□□ -1.91
BRCA1-229ENST00000621897 ZCCHC3Q9NUD5 404 aaKnown RBP3.13□□□□□ -1.91
BRCA1-229ENST00000621897 MBD2Q9UBB5 411 aa3.13□□□□□ -1.91
BRCA1-229ENST00000621897 EVC2Q86UK5 1308 aa3.13□□□□□ -1.91
BRCA1-229ENST00000621897 A0A0U1RQV5 110 aa3.12□□□□□ -1.91
BRCA1-229ENST00000621897 ILVBLA1L0T0 632 aa3.12□□□□□ -1.91
BRCA1-229ENST00000621897 CCDC162PA2VCL2 907 aa3.12□□□□□ -1.91
BRCA1-229ENST00000621897 SUPT3HB4E1H0 165 aa3.12□□□□□ -1.91
BRCA1-229ENST00000621897 ZNF208O43345 1280 aa3.12□□□□□ -1.91
BRCA1-229ENST00000621897 CDK14O94921 469 aa3.12□□□□□ -1.91
BRCA1-229ENST00000621897 SNAI1O95863 264 aaPredicted RBP3.12□□□□□ -1.91
BRCA1-229ENST00000621897 PIGRP01833 764 aa3.12□□□□□ -1.91
BRCA1-229ENST00000621897 IGFBP1P08833 259 aaPredicted RBP3.12□□□□□ -1.91
BRCA1-229ENST00000621897 SRMP19623 302 aa3.12□□□□□ -1.91
BRCA1-229ENST00000621897 ZBTB25P24278 435 aa3.12□□□□□ -1.91
BRCA1-229ENST00000621897 PRDX6P30041 224 aa3.12□□□□□ -1.91
BRCA1-229ENST00000621897 ADRA1AP35348 466 aa3.12□□□□□ -1.91
BRCA1-229ENST00000621897 DRD3P35462 400 aa3.12□□□□□ -1.91
BRCA1-229ENST00000621897 SPAM1P38567 509 aa3.12□□□□□ -1.91
BRCA1-229ENST00000621897 GRIA1P42261 906 aa3.12□□□□□ -1.91
BRCA1-229ENST00000621897 NPBWR1P48145 328 aa3.12□□□□□ -1.91
BRCA1-229ENST00000621897 FNTAP49354 379 aa3.12□□□□□ -1.91
BRCA1-229ENST00000621897 MYL6P60660 151 aa3.12□□□□□ -1.91
BRCA1-229ENST00000621897 B2MP61769 119 aa3.12□□□□□ -1.91
BRCA1-229ENST00000621897 YWHAGP61981 247 aaKnown RBP eCLIP3.12□□□□□ -1.91
BRCA1-229ENST00000621897 YWHAEP62258 255 aaKnown RBP3.12□□□□□ -1.91
BRCA1-229ENST00000621897 CBX1P83916 185 aa3.12□□□□□ -1.91
BRCA1-229ENST00000621897 DR1Q01658 176 aa3.12□□□□□ -1.91
BRCA1-229ENST00000621897 OTUD4Q01804 1114 aaKnown RBP3.12□□□□□ -1.91
BRCA1-229ENST00000621897 NAAAQ02083 359 aa3.12□□□□□ -1.91
BRCA1-229ENST00000621897 FOLH1Q04609 750 aa3.12□□□□□ -1.91
BRCA1-229ENST00000621897 BST1Q10588 318 aa3.12□□□□□ -1.91
BRCA1-229ENST00000621897 ASPHQ12797 758 aa3.12□□□□□ -1.91
BRCA1-229ENST00000621897 BTG3Q14201 252 aaPredicted RBP3.12□□□□□ -1.91
BRCA1-229ENST00000621897 ZNF79Q15937 498 aa3.12□□□□□ -1.91
BRCA1-229ENST00000621897 TATDN3Q17R31 274 aa3.12□□□□□ -1.91
BRCA1-229ENST00000621897 EXOC3L2Q2M3D2 409 aa3.12□□□□□ -1.91
BRCA1-229ENST00000621897 HNRNPA1L2Q32P51 320 aaKnown RBP3.12□□□□□ -1.91
BRCA1-229ENST00000621897 ZNF829Q3KNS6 432 aaPredicted RBP3.12□□□□□ -1.91
BRCA1-229ENST00000621897 MARC1Q5VT66 337 aa3.12□□□□□ -1.91
BRCA1-229ENST00000621897 RSBN1Q5VWQ0 802 aaPredicted RBP3.12□□□□□ -1.91
BRCA1-229ENST00000621897 PRAMEF7Q5VXH5 474 aa3.12□□□□□ -1.91
BRCA1-229ENST00000621897 ZNF776Q68DI1 518 aaPredicted RBP3.12□□□□□ -1.91
BRCA1-229ENST00000621897 SCARA5Q6ZMJ2 495 aa3.12□□□□□ -1.91
BRCA1-229ENST00000621897 TMEM26Q6ZUK4 368 aa3.12□□□□□ -1.91
BRCA1-229ENST00000621897 TRMT10CQ7L0Y3 403 aaKnown RBP3.12□□□□□ -1.91
BRCA1-229ENST00000621897 TRPM8Q7Z2W7 1104 aa3.12□□□□□ -1.91
BRCA1-229ENST00000621897 GPR142Q7Z601 462 aa3.12□□□□□ -1.91
BRCA1-229ENST00000621897 PAQR7Q86WK9 346 aa3.12□□□□□ -1.91
BRCA1-229ENST00000621897 KATNAL2Q8IYT4 538 aa3.12□□□□□ -1.91
BRCA1-229ENST00000621897 LRRC75A-AS1Q8N1F1 130 aa3.12□□□□□ -1.91
BRCA1-229ENST00000621897 C8orf46Q8TAG6 207 aa3.12□□□□□ -1.91
BRCA1-229ENST00000621897 ERMNQ8TAM6 284 aa3.12□□□□□ -1.91
BRCA1-229ENST00000621897 CCDC12Q8WUD4 166 aaPredicted RBP3.12□□□□□ -1.91
BRCA1-229ENST00000621897 FCGR1BQ92637 280 aa3.12□□□□□ -1.91
BRCA1-229ENST00000621897 EMG1Q92979 244 aaKnown RBP3.12□□□□□ -1.91
BRCA1-229ENST00000621897 PRRC1Q96M27 445 aa3.12□□□□□ -1.91
BRCA1-229ENST00000621897 MCCC1Q96RQ3 725 aaPredicted RBP3.12□□□□□ -1.91
BRCA1-229ENST00000621897 NPY6RQ99463 290 aa3.12□□□□□ -1.91
BRCA1-229ENST00000621897 BPIFA3Q9BQP9 254 aa3.12□□□□□ -1.91
BRCA1-229ENST00000621897 CCM2Q9BSQ5 444 aa3.12□□□□□ -1.91
BRCA1-229ENST00000621897 NUSAP1Q9BXS6 441 aaKnown RBP3.12□□□□□ -1.91
BRCA1-229ENST00000621897 SIRPDQ9H106 197 aa3.12□□□□□ -1.91
BRCA1-229ENST00000621897 BLZF1Q9H2G9 400 aa3.12□□□□□ -1.91
BRCA1-229ENST00000621897 ACTR8Q9H981 624 aa3.12□□□□□ -1.91
BRCA1-229ENST00000621897 TMEM165Q9HC07 324 aa3.12□□□□□ -1.91
BRCA1-229ENST00000621897 UBE2TQ9NPD8 197 aaPredicted RBP3.12□□□□□ -1.91
BRCA1-229ENST00000621897 MED4Q9NPJ6 270 aa3.12□□□□□ -1.91
BRCA1-229ENST00000621897 ZNF446Q9NWS9 450 aa3.12□□□□□ -1.91
BRCA1-229ENST00000621897 IL20RAQ9UHF4 553 aa3.12□□□□□ -1.91
BRCA1-229ENST00000621897 IKZF3Q9UKT9 509 aa3.12□□□□□ -1.91
BRCA1-229ENST00000621897 PRELID1Q9Y255 219 aa3.12□□□□□ -1.91
BRCA1-229ENST00000621897 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.12□□□□□ -1.91
BRCA1-229ENST00000621897 SLCO1B1Q9Y6L6 691 aa3.12□□□□□ -1.91
BRCA1-229ENST00000621897 PCP4L1A6NKN8 68 aa3.11□□□□□ -1.91
BRCA1-229ENST00000621897 LRRIQ3A6PVS8 624 aaPredicted RBP3.11□□□□□ -1.91
BRCA1-229ENST00000621897 WASH3PC4AMC7 463 aa3.11□□□□□ -1.91
BRCA1-229ENST00000621897 SLC28A1O00337 649 aa3.11□□□□□ -1.91
BRCA1-229ENST00000621897 ZW10O43264 779 aa3.11□□□□□ -1.91
BRCA1-229ENST00000621897 SCO2O43819 266 aa3.11□□□□□ -1.91
BRCA1-229ENST00000621897 LCMT2O60294 686 aaKnown RBP3.11□□□□□ -1.91
BRCA1-229ENST00000621897 FCMRO60667 390 aa3.11□□□□□ -1.91
BRCA1-229ENST00000621897 SDC3O75056 442 aa3.11□□□□□ -1.91
BRCA1-229ENST00000621897 CDH16O75309 829 aa3.11□□□□□ -1.91
BRCA1-229ENST00000621897 CLPXO76031 633 aa3.11□□□□□ -1.91
BRCA1-229ENST00000621897 CLTAP09496 248 aa3.11□□□□□ -1.91
BRCA1-229ENST00000621897 OR9G9P0C7N8 305 aa3.11□□□□□ -1.91
BRCA1-229ENST00000621897 STAG3L2P0CL84 134 aa3.11□□□□□ -1.91
BRCA1-229ENST00000621897 ZNF44P15621 663 aa3.11□□□□□ -1.91
BRCA1-229ENST00000621897 PTNP21246 168 aa3.11□□□□□ -1.91
BRCA1-229ENST00000621897 ACKR3P25106 362 aa3.11□□□□□ -1.91
BRCA1-229ENST00000621897 FASP25445 335 aa3.11□□□□□ -1.91
BRCA1-229ENST00000621897 UCP1P25874 307 aa3.11□□□□□ -1.91
BRCA1-229ENST00000621897 DPP4P27487 766 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms